RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 RBBP8NLQ8NC74 664 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 FOXP3Q9BZS1 431 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 EBF1Q9UH73 591 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 STRIP2Q9ULQ0 834 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 IQGAP1P46940 1657 aa5.53□□□□□ -1.52
TOPBP1-208ENST00000511439 DEPDC5O75140 1603 aa5.53□□□□□ -1.52
TOPBP1-208ENST00000511439 STRCP1A6NGW2 1772 aa5.53□□□□□ -1.52
TOPBP1-208ENST00000511439 MEIS3P2A8K0S8 358 aa5.53□□□□□ -1.52
TOPBP1-208ENST00000511439 USP2O75604 605 aaPredicted RBP5.53□□□□□ -1.52
TOPBP1-208ENST00000511439 LRRFIP1Q32MZ4 808 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-208ENST00000511439 CEP128Q6ZU80 1094 aa5.53□□□□□ -1.52
TOPBP1-208ENST00000511439 MCF2L2Q86YR7 1114 aa5.53□□□□□ -1.52
TOPBP1-208ENST00000511439 SRRTQ9BXP5 876 aaKnown RBP5.53□□□□□ -1.52
TOPBP1-208ENST00000511439 ANTXR1Q9H6X2 564 aa5.53□□□□□ -1.52
TOPBP1-208ENST00000511439 SIRT5Q9NXA8 310 aa5.53□□□□□ -1.52
TOPBP1-208ENST00000511439 KCTD3Q9Y597 815 aa5.53□□□□□ -1.52
TOPBP1-208ENST00000511439 KDM5DQ9BY66 1539 aa5.53□□□□□ -1.52
TOPBP1-208ENST00000511439 AFF2P51816 1311 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 SIGLEC6O43699 453 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 CLEC3AO75596 197 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 SYPP08247 313 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 PNLIPP16233 465 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 ARL4AP40617 200 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 GIPRP48546 466 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 SRSF3P84103 164 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 TMEM62Q0P6H9 643 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 OVOS1Q6IE37 1185 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 CCDC81Q6ZN84 652 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 ATG4CQ96DT6 458 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 SHDQ96IW2 340 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 FCRL2Q96LA5 508 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 SIGLEC10Q96LC7 697 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 CNNM2Q9H8M5 875 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 GCM1Q9NP62 436 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 PARD6AQ9NPB6 346 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 TNFRSF10DQ9UBN6 386 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 IRAK3Q9Y616 596 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 ABCA6Q8N139 1617 aa5.52□□□□□ -1.53
TOPBP1-208ENST00000511439 TMEM82A0PJX8 343 aa5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 NOTOA8MTQ0 251 aa5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 EIF6P56537 245 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 RTP1P59025 263 aa5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 FBXW10Q5XX13 1052 aa5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 GALNT18Q6P9A2 607 aa5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 NLRC3Q7RTR2 1065 aa5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 TMC3Q7Z5M5 1100 aa5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 SIRT2Q8IXJ6 389 aa5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 CPLX3Q8WVH0 158 aa5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 CRBNQ96SW2 442 aa5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 TANGO6Q9C0B7 1094 aa5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 ZCCHC4Q9H5U6 513 aa5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 PRR13Q9NZ81 148 aa5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 COL16A1Q07092 1604 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 BCL9LQ86UU0 1499 aa5.51□□□□□ -1.53
TOPBP1-208ENST00000511439 BLMP54132 1417 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 ABCC1P33527 1531 aa5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 KIF14Q15058 1648 aa5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 WTIPA6NIX2 430 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 TNFRSF10CO14798 259 aa5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 PRAMEF1O95521 474 aa5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 SSBP05455 408 aaKnown RBP eCLIP5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 NME1P15531 152 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 HOXA5P20719 270 aa5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 LAPTM5Q13571 262 aa5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 BBS9Q3SYG4 887 aa5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 INTS3Q68E01 1043 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 LSRQ86X29 649 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 HHIPL1Q96JK4 782 aa5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 TM9SF2Q99805 663 aa5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 SGPP1Q9BX95 441 aa5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 CHST7Q9NS84 486 aa5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 MBD1Q9UIS9 605 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 TAF6LQ9Y6J9 622 aa5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 SHPRHQ149N8 1683 aa5.5□□□□□ -1.53
TOPBP1-208ENST00000511439 ADAMTS20P59510 1910 aa5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 FKTNO75072 461 aa5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 MPOP05164 745 aa5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 BMP7P18075 431 aa5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 BMP8BP34820 402 aa5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 GALK1P51570 392 aa5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 ERVFRD-1P60508 538 aa5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 YBX1P67809 324 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 SF3A1Q15459 793 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 TAB3Q8N5C8 712 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 OR6P1Q8NGX9 317 aa5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 SREK1Q8WXA9 508 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 RELTQ969Z4 430 aa5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 PRDM14Q9GZV8 571 aa5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 MKRN2Q9H000 416 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 PCDHB12Q9Y5F1 795 aa5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 EP400Q96L91 3159 aa5.49□□□□□ -1.53
TOPBP1-208ENST00000511439 CEP350Q5VT06 3117 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 CLTCQ00610 1675 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 ITSN2Q9NZM3 1697 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 MLH3Q9UHC1 1453 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 A0A1W2PQ45 241 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 A0A1W2PQY0 241 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 FADS2P1A8MWK0 482 aa5.48□□□□□ -1.53
TOPBP1-208ENST00000511439 N4BP3O15049 544 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms