RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 C1orf122Q6ZSJ8 110 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 SP8Q8IXZ3 490 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 PI4K2BQ8TCG2 481 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 CNKSR1Q969H4 720 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 NUDT12Q9BQG2 462 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 HERPUD2Q9BSE4 406 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 TSPYL1Q9H0U9 437 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 RBSNQ9H1K0 784 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 EGFL7Q9UHF1 273 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 PCSK1NQ9UHG2 260 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 ATP6V0A2Q9Y487 856 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 AOX1Q06278 1338 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 LINC00854A0A1B0GVQ3 168 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 GSPT1P15170 499 aaKnown RBP10.92□□□□□ -0.66
USP53-207ENST00000510852 TGFB2P61812 414 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 DACT2Q5SW24 774 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 PRPF40BQ6NWY9 871 aaKnown RBP10.92□□□□□ -0.66
USP53-207ENST00000510852 VPS37DQ86XT2 251 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 ATP6V1E2Q96A05 226 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 ANKIB1Q9P2G1 1089 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 RASA4BC9J798 803 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 PIK3CDO00329 1044 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 RASA4O43374 803 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 IFIT1P09914 478 aaKnown RBP10.92□□□□□ -0.66
USP53-207ENST00000510852 KCNA3P22001 575 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 OSBPP22059 807 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 CAP2P40123 477 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 PRPHP41219 470 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 MRE11P49959 708 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 APBA1Q02410 837 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 CFAP58Q5T655 872 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 RSAD2Q8WXG1 361 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 NACC2Q96BF6 587 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 ZBTB10Q96DT7 871 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 DBNDD1Q9H9R9 158 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 NEUROD4Q9HD90 331 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 PCDH10Q9P2E7 1040 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 CD2APQ9Y5K6 639 aa10.92□□□□□ -0.66
USP53-207ENST00000510852 XDHP47989 1333 aa10.91□□□□□ -0.66
USP53-207ENST00000510852 GOLGB1Q14789 3259 aaKnown RBP10.91□□□□□ -0.66
USP53-207ENST00000510852 BHMG1C9JSJ3 638 aaPredicted RBP10.91□□□□□ -0.66
USP53-207ENST00000510852 ERC2O15083 957 aa10.91□□□□□ -0.66
USP53-207ENST00000510852 GLRX3O76003 335 aaKnown RBP10.91□□□□□ -0.66
USP53-207ENST00000510852 KCNJ4P48050 445 aa10.91□□□□□ -0.66
USP53-207ENST00000510852 MRPL28Q13084 256 aaKnown RBP10.91□□□□□ -0.66
USP53-207ENST00000510852 WTAPQ15007 396 aa10.91□□□□□ -0.66
USP53-207ENST00000510852 MUM1Q2TAK8 710 aa10.91□□□□□ -0.66
USP53-207ENST00000510852 BMP2KLQ5H9B9 411 aa10.91□□□□□ -0.66
USP53-207ENST00000510852 OLFM4Q6UX06 510 aa10.91□□□□□ -0.66
USP53-207ENST00000510852 RSRC2Q7L4I2 434 aaKnown RBP10.91□□□□□ -0.66
USP53-207ENST00000510852 TMC7Q7Z402 723 aa10.91□□□□□ -0.66
USP53-207ENST00000510852 MYOCDQ8IZQ8 938 aa10.91□□□□□ -0.66
USP53-207ENST00000510852 HAUS7Q99871 368 aa10.91□□□□□ -0.66
USP53-207ENST00000510852 SRA1Q9HD15 236 aaKnown RBP10.91□□□□□ -0.66
USP53-207ENST00000510852 PIH1D1Q9NWS0 290 aaKnown RBP10.91□□□□□ -0.66
USP53-207ENST00000510852 NSFL1CQ9UNZ2 370 aaKnown RBP10.91□□□□□ -0.66
USP53-207ENST00000510852 USP17L15C9J2P7 530 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 USP17L10C9JJH3 530 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 USP17L13C9JLJ4 530 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 USP17L12C9JPN9 530 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 USP17L11C9JVI0 530 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 USP17L21D6R901 530 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 USP17L18D6R9N7 530 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 USP17L22D6RA61 530 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 USP17L17D6RBQ6 530 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 USP17L19D6RCP7 530 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 USP17L20D6RJB6 530 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 PGRP06401 933 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 HTR3AP46098 478 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 RXRGP48443 463 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 USP17L24Q0WX57 530 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 PREPLQ4J6C6 727 aaPredicted RBP10.9□□□□□ -0.66
USP53-207ENST00000510852 FAAH2Q6GMR7 532 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 TRIM74Q86UV6 250 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 TRIM73Q86UV7 250 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 JAKMIP2Q96AA8 810 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 SLC39A3Q9BRY0 314 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 LEMD3Q9Y2U8 911 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 ZNF804BA4D1E1 1349 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 ATP5JP18859 108 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 SESN3P58005 492 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 PFKPQ01813 784 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 SEPT7Q16181 437 aaKnown RBP10.9□□□□□ -0.66
USP53-207ENST00000510852 MZT2BQ6NZ67 158 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 KRT26Q7Z3Y9 468 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 TTLL6Q8N841 843 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 STON2Q8WXE9 905 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 ZMAT2Q96NC0 199 aaKnown RBP10.9□□□□□ -0.66
USP53-207ENST00000510852 BOLA2Q9H3K6 86 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 PNMA8BQ9ULN7 279 aaPredicted RBP10.9□□□□□ -0.66
USP53-207ENST00000510852 TMX2Q9Y320 296 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 KIF13BQ9NQT8 1826 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 SRCAPQ6ZRS2 3230 aa10.9□□□□□ -0.66
USP53-207ENST00000510852 DAB2P98082 770 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 PAK2Q13177 524 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 SMC1AQ14683 1233 aaKnown RBP10.89□□□□□ -0.67
USP53-207ENST00000510852 RILPL1Q5EBL4 403 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 TTC39AQ5SRH9 613 aa10.89□□□□□ -0.67
USP53-207ENST00000510852 EEPD1Q7L9B9 569 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms