RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	USP44	Q9H0E7	712 aa		11.76	□□□□□ -0.53
PTPN20-223	ENST00000509900	ASTN1	O14525	1302 aa		11.76	□□□□□ -0.53
PTPN20-223	ENST00000509900	IL16	Q14005	1332 aa		11.76	□□□□□ -0.53
PTPN20-223	ENST00000509900	ZFHX4	Q86UP3	3567 aa		11.76	□□□□□ -0.53
PTPN20-223	ENST00000509900	EP300	Q09472	2414 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900		H0Y858	1186 aa		11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	FLOT1	O75955	427 aa		11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	BAG3	O95817	575 aa		11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	ERVK-21	P61565	698 aa		11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	ACVR2B	Q13705	512 aa		11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	SEPT2	Q15019	361 aa		11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	CERKL	Q49MI3	558 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	PADI6	Q6TGC4	694 aa		11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	ATF7IP	Q6VMQ6	1270 aa		11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	SPATA5	Q8NB90	893 aa		11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	XAGE2	Q96GT9	111 aa		11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	IL21	Q9HBE4	155 aa		11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	TLR9	Q9NR96	1032 aa		11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	FAM50B	Q9Y247	325 aa		11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	DNAH14	Q0VDD8	3507 aa		11.75	□□□□□ -0.53
PTPN20-223	ENST00000509900	CYP2C9	P11712	490 aa		11.74	□□□□□ -0.53
PTPN20-223	ENST00000509900	SHMT1	P34896	483 aa		11.74	□□□□□ -0.53
PTPN20-223	ENST00000509900	IL15	P40933	162 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN20-223	ENST00000509900	PSMC6	P62333	389 aa		11.74	□□□□□ -0.53
PTPN20-223	ENST00000509900	COL19A1	Q14993	1142 aa		11.74	□□□□□ -0.53
PTPN20-223	ENST00000509900	CCDC27	Q2M243	656 aa		11.74	□□□□□ -0.53
PTPN20-223	ENST00000509900	CNTNAP3B	Q96NU0	1288 aa		11.74	□□□□□ -0.53
PTPN20-223	ENST00000509900	FSD1	Q9BTV5	496 aa		11.74	□□□□□ -0.53
PTPN20-223	ENST00000509900	CNTNAP3	Q9BZ76	1288 aa		11.74	□□□□□ -0.53
PTPN20-223	ENST00000509900	IRF2BPL	Q9H1B7	796 aa		11.74	□□□□□ -0.53
PTPN20-223	ENST00000509900	SERPINB13	Q9UIV8	391 aa		11.74	□□□□□ -0.53
PTPN20-223	ENST00000509900	ADAMTS5	Q9UNA0	930 aa		11.74	□□□□□ -0.53
PTPN20-223	ENST00000509900	DNAJC25-GNG10	A0A024R161	153 aa		11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900		A0A1B0GUL7	405 aa		11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900	CABYR	O75952	493 aa		11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900	NAA16	Q6N069	864 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900	MICAL3	Q7RTP6	2002 aa		11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900	PABPC5	Q96DU9	382 aa	Known RBP	11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900	TGS1	Q96RS0	853 aa	Known RBP	11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900	EHD4	Q9H223	541 aa		11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900	ABHD16B	Q9H3Z7	469 aa		11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900	CABP5	Q9NP86	173 aa		11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900	TRMT13	Q9NUP7	481 aa	Known RBP	11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900	LRP2BP	Q9P2M1	347 aa		11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900	PA2G4	Q9UQ80	394 aa	Known RBP	11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900	SCN10A	Q9Y5Y9	1956 aa		11.73	□□□□□ -0.53
PTPN20-223	ENST00000509900	CEP250	Q9BV73	2442 aa		11.72	□□□□□ -0.53
PTPN20-223	ENST00000509900	LINC01553	A4QN01	128 aa		11.72	□□□□□ -0.53
PTPN20-223	ENST00000509900	PTGS1	P23219	599 aa		11.72	□□□□□ -0.53
PTPN20-223	ENST00000509900	STAT3	P40763	770 aa		11.72	□□□□□ -0.53
PTPN20-223	ENST00000509900	MVP	Q14764	893 aa	Known RBP	11.72	□□□□□ -0.53
PTPN20-223	ENST00000509900	SMAD2	Q15796	467 aa	Known RBP	11.72	□□□□□ -0.53
PTPN20-223	ENST00000509900	SPICE1	Q8N0Z3	855 aa		11.72	□□□□□ -0.53
PTPN20-223	ENST00000509900	MRPL38	Q96DV4	380 aa	Known RBP	11.72	□□□□□ -0.53
PTPN20-223	ENST00000509900	FGD4	Q96M96	766 aa		11.72	□□□□□ -0.53
PTPN20-223	ENST00000509900	SEZ6L	Q9BYH1	1024 aa		11.72	□□□□□ -0.53
PTPN20-223	ENST00000509900	KATNBL1	Q9H079	304 aa		11.72	□□□□□ -0.53
PTPN20-223	ENST00000509900	ZNF214	Q9UL59	606 aa	Predicted RBP	11.72	□□□□□ -0.53
PTPN20-223	ENST00000509900	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.72	□□□□□ -0.53
PTPN20-223	ENST00000509900	SPTBN2	O15020	2390 aa		11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	AVPR2	P30518	371 aa		11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	RFC2	P35250	354 aa		11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	LTBR	P36941	435 aa		11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	NBL1	P41271	181 aa		11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	MCAM	P43121	646 aa		11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	WDR5	P61964	334 aa	Known RBP	11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	DYNLL1	P63167	89 aa	Known RBP	11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	FSCN1	Q16658	493 aa	Known RBP	11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	SWT1	Q5T5J6	900 aa	Known RBP	11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	EP400NL	Q6ZTU2	488 aa		11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	REPS2	Q8NFH8	660 aa		11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	POP1	Q99575	1024 aa	Known RBP	11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	FBXO28	Q9NVF7	368 aa		11.71	□□□□□ -0.53
PTPN20-223	ENST00000509900	TNKS	O95271	1327 aa		11.7	□□□□□ -0.54
PTPN20-223	ENST00000509900	VWA5A	O00534	786 aa		11.7	□□□□□ -0.54
PTPN20-223	ENST00000509900	BAIAP3	O94812	1187 aa		11.7	□□□□□ -0.54
PTPN20-223	ENST00000509900	IQCF3	P0C7M6	154 aa		11.7	□□□□□ -0.54
PTPN20-223	ENST00000509900	ARID4A	P29374	1257 aa	Predicted RBP	11.7	□□□□□ -0.54
PTPN20-223	ENST00000509900	KCNJ6	P48051	423 aa		11.7	□□□□□ -0.54
PTPN20-223	ENST00000509900	DEFB103A	P81534	67 aa		11.7	□□□□□ -0.54
PTPN20-223	ENST00000509900	ZXDA	P98168	799 aa		11.7	□□□□□ -0.54
PTPN20-223	ENST00000509900	TCEAL5	Q5H9L2	206 aa		11.7	□□□□□ -0.54
PTPN20-223	ENST00000509900	TTC13	Q8NBP0	860 aa		11.7	□□□□□ -0.54
PTPN20-223	ENST00000509900	ZNF516	Q92618	1163 aa		11.7	□□□□□ -0.54
PTPN20-223	ENST00000509900	C17orf80	Q9BSJ5	609 aa		11.7	□□□□□ -0.54
PTPN20-223	ENST00000509900	GNE	Q9Y223	722 aa	Known RBP	11.7	□□□□□ -0.54
PTPN20-223	ENST00000509900	MBTPS2	O43462	519 aa		11.69	□□□□□ -0.54
PTPN20-223	ENST00000509900	COPB2	P35606	906 aa		11.69	□□□□□ -0.54
PTPN20-223	ENST00000509900	TIGD5	Q53EQ6	642 aa		11.69	□□□□□ -0.54
PTPN20-223	ENST00000509900	ARMCX2	Q7L311	632 aa		11.69	□□□□□ -0.54
PTPN20-223	ENST00000509900	TLK2	Q86UE8	772 aa		11.69	□□□□□ -0.54
PTPN20-223	ENST00000509900	CLEC10A	Q8IUN9	316 aa		11.69	□□□□□ -0.54
PTPN20-223	ENST00000509900	SIAH1	Q8IUQ4	282 aa		11.69	□□□□□ -0.54
PTPN20-223	ENST00000509900	MAGEB6	Q8N7X4	407 aa		11.69	□□□□□ -0.54
PTPN20-223	ENST00000509900	BANK1	Q8NDB2	785 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms