RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 SURF1Q15526 300 aa5.69□□□□□ -1.5
NIPBL-206ENST00000509429 HSP90AB3PQ58FF7 597 aa5.69□□□□□ -1.5
NIPBL-206ENST00000509429 NXPE4Q6UWF7 544 aa5.69□□□□□ -1.5
NIPBL-206ENST00000509429 SLCO6A1Q86UG4 719 aa5.69□□□□□ -1.5
NIPBL-206ENST00000509429 MSL3Q8N5Y2 521 aaKnown RBP5.69□□□□□ -1.5
NIPBL-206ENST00000509429 DAGLBQ8NCG7 672 aa5.69□□□□□ -1.5
NIPBL-206ENST00000509429 MRRFQ96E11 262 aaKnown RBP5.69□□□□□ -1.5
NIPBL-206ENST00000509429 ASPNQ9BXN1 380 aa5.69□□□□□ -1.5
NIPBL-206ENST00000509429 HDAC8Q9BY41 377 aa5.69□□□□□ -1.5
NIPBL-206ENST00000509429 GOLGA6CA6NDK9 693 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 GOLGA6BA6NDN3 693 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 LAMTOR5O43504 91 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 FKTNO75072 461 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 GOLGA6DP0CG33 693 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 NMIQ13287 307 aaPredicted RBP5.68□□□□□ -1.5
NIPBL-206ENST00000509429 C4orf46Q504U0 113 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 MIIPQ5JXC2 388 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 CC2D1BQ5T0F9 858 aaKnown RBP5.68□□□□□ -1.5
NIPBL-206ENST00000509429 IGFL4Q6B9Z1 124 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 PAQR3Q6TCH7 311 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 DDX46Q7L014 1031 aaKnown RBP5.68□□□□□ -1.5
NIPBL-206ENST00000509429 SNRNP27Q8WVK2 155 aaKnown RBP5.68□□□□□ -1.5
NIPBL-206ENST00000509429 TCTN2Q96GX1 697 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 NIF3L1Q9GZT8 377 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 ANO2Q9NQ90 1003 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 GOLGA6AQ9NYA3 693 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 FRMD4BQ9Y2L6 1034 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 HCFC2Q9Y5Z7 792 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 COMMD10Q9Y6G5 202 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 MYO15BQ96JP2 1530 aa5.68□□□□□ -1.5
NIPBL-206ENST00000509429 MROH6A6NGR9 719 aa5.67□□□□□ -1.5
NIPBL-206ENST00000509429 U2SURPO15042 1029 aaKnown RBP5.67□□□□□ -1.5
NIPBL-206ENST00000509429 DHX16O60231 1041 aaKnown RBP5.67□□□□□ -1.5
NIPBL-206ENST00000509429 FBXO24O75426 580 aa5.67□□□□□ -1.5
NIPBL-206ENST00000509429 ZNF202O95125 648 aa5.67□□□□□ -1.5
NIPBL-206ENST00000509429 SCP2P22307 547 aa5.67□□□□□ -1.5
NIPBL-206ENST00000509429 HSP90AA2PQ14568 343 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-206ENST00000509429 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.67□□□□□ -1.5
NIPBL-206ENST00000509429 ZNF655Q8N720 491 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-206ENST00000509429 PMM1Q92871 262 aa5.67□□□□□ -1.5
NIPBL-206ENST00000509429 ACSF2Q96CM8 615 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-206ENST00000509429 PPM1HQ9ULR3 514 aa5.67□□□□□ -1.5
NIPBL-206ENST00000509429 NPEPPSL1A6NEC2 478 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 GPR42O15529 346 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 NDUFB5O43674 189 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 PPP1R15AO75807 674 aaPredicted RBP5.66□□□□□ -1.5
NIPBL-206ENST00000509429 ABL1P00519 1130 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 CYBBP04839 570 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 COPB2P35606 906 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 ANP32AP39687 249 aaKnown RBP5.66□□□□□ -1.5
NIPBL-206ENST00000509429 BBS9Q3SYG4 887 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 ZKSCAN2Q63HK3 967 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 ANKRD23Q86SG2 305 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 CIR1Q86X95 450 aaPredicted RBP5.66□□□□□ -1.5
NIPBL-206ENST00000509429 AMOTL1Q8IY63 956 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 PNISRQ8TF01 805 aaKnown RBP5.66□□□□□ -1.5
NIPBL-206ENST00000509429 GPATCH3Q96I76 525 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 KREMEN1Q96MU8 473 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 WWC2-AS2Q96NR7 200 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 SENP7Q9BQF6 1050 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 ADAM30Q9UKF2 790 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 IVNS1ABPQ9Y6Y0 642 aa5.66□□□□□ -1.5
NIPBL-206ENST00000509429 ZNF500O60304 480 aaPredicted RBP5.65□□□□□ -1.5
NIPBL-206ENST00000509429 PARNO95453 639 aaKnown RBP5.65□□□□□ -1.5
NIPBL-206ENST00000509429 ASGR2P07307 311 aa5.65□□□□□ -1.5
NIPBL-206ENST00000509429 SYPP08247 313 aa5.65□□□□□ -1.5
NIPBL-206ENST00000509429 BDNFP23560 247 aa5.65□□□□□ -1.5
NIPBL-206ENST00000509429 MCM7P33993 719 aa5.65□□□□□ -1.5
NIPBL-206ENST00000509429 PDE4BQ07343 736 aa5.65□□□□□ -1.5
NIPBL-206ENST00000509429 MTA1Q13330 715 aa5.65□□□□□ -1.5
NIPBL-206ENST00000509429 GET4Q7L5D6 327 aaPredicted RBP5.65□□□□□ -1.5
NIPBL-206ENST00000509429 USP33Q8TEY7 942 aa5.65□□□□□ -1.5
NIPBL-206ENST00000509429 NOX5Q96PH1 765 aa5.65□□□□□ -1.5
NIPBL-206ENST00000509429 GNL3LQ9NVN8 582 aaKnown RBP5.65□□□□□ -1.5
NIPBL-206ENST00000509429 IMPACTQ9P2X3 320 aa5.65□□□□□ -1.5
NIPBL-206ENST00000509429 RPGRIP1LQ68CZ1 1315 aa5.65□□□□□ -1.51
NIPBL-206ENST00000509429 SRGAP3O43295 1099 aa5.64□□□□□ -1.51
NIPBL-206ENST00000509429 STK10O94804 968 aaKnown RBP5.64□□□□□ -1.51
NIPBL-206ENST00000509429 ERBB2P04626 1255 aa5.64□□□□□ -1.51
NIPBL-206ENST00000509429 ZC3H6P61129 1189 aaKnown RBP5.64□□□□□ -1.51
NIPBL-206ENST00000509429 ZNF211Q13398 564 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-206ENST00000509429 SF3A1Q15459 793 aaKnown RBP5.64□□□□□ -1.51
NIPBL-206ENST00000509429 FAM26FQ5R3K3 315 aa5.64□□□□□ -1.51
NIPBL-206ENST00000509429 DNAJC14Q6Y2X3 702 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-206ENST00000509429 CITED4Q96RK1 184 aa5.64□□□□□ -1.51
NIPBL-206ENST00000509429 CFAP69A5D8W1 941 aa5.63□□□□□ -1.51
NIPBL-206ENST00000509429 GPR182O15218 404 aa5.63□□□□□ -1.51
NIPBL-206ENST00000509429 DBHP09172 617 aa5.63□□□□□ -1.51
NIPBL-206ENST00000509429 GSTT1P30711 240 aa5.63□□□□□ -1.51
NIPBL-206ENST00000509429 PRR5P85299 388 aa5.63□□□□□ -1.51
NIPBL-206ENST00000509429 HSP90AB2PQ58FF8 381 aa5.63□□□□□ -1.51
NIPBL-206ENST00000509429 NBPF6Q5VWK0 638 aa5.63□□□□□ -1.51
NIPBL-206ENST00000509429 TXNDC2Q86VQ3 553 aa5.63□□□□□ -1.51
NIPBL-206ENST00000509429 NBPF5PQ86XG9 351 aaPredicted RBP5.63□□□□□ -1.51
NIPBL-206ENST00000509429 ATL2Q8NHH9 583 aa5.63□□□□□ -1.51
NIPBL-206ENST00000509429 ZNF503Q96F45 646 aa5.63□□□□□ -1.51
NIPBL-206ENST00000509429 NBPF4Q96M43 638 aa5.63□□□□□ -1.51
NIPBL-206ENST00000509429 PPP1R1BQ9UD71 204 aaPredicted RBP5.63□□□□□ -1.51
NIPBL-206ENST00000509429 NARSO43776 548 aaKnown RBP5.62□□□□□ -1.51
NIPBL-206ENST00000509429 CELA3AP09093 270 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms