RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 LSG1Q9H089 658 aaKnown RBP17.11■□□□□ 0.33
HMGCL-208ENST00000509389 DYNC1LI2O43237 492 aaPredicted RBP17.1■□□□□ 0.33
HMGCL-208ENST00000509389 PDHBP11177 359 aa17.1■□□□□ 0.33
HMGCL-208ENST00000509389 BAATQ14032 418 aaPredicted RBP17.1■□□□□ 0.33
HMGCL-208ENST00000509389 TMEM63BQ5T3F8 832 aa17.1■□□□□ 0.33
HMGCL-208ENST00000509389 MFSD6Q6ZSS7 791 aa17.1■□□□□ 0.33
HMGCL-208ENST00000509389 TBC1D10CQ8IV04 446 aa17.1■□□□□ 0.33
HMGCL-208ENST00000509389 TTC14Q96N46 770 aa17.1■□□□□ 0.33
HMGCL-208ENST00000509389 KIF2CQ99661 725 aa17.1■□□□□ 0.33
HMGCL-208ENST00000509389 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.1■□□□□ 0.33
HMGCL-208ENST00000509389 AP5M1Q9H0R1 490 aa17.1■□□□□ 0.33
HMGCL-208ENST00000509389 NFIBO00712 420 aa17.09■□□□□ 0.33
HMGCL-208ENST00000509389 TLR3O15455 904 aaKnown RBP17.09■□□□□ 0.33
HMGCL-208ENST00000509389 PCP11498 1178 aaKnown RBP17.09■□□□□ 0.33
HMGCL-208ENST00000509389 FSCN1Q16658 493 aaKnown RBP17.09■□□□□ 0.33
HMGCL-208ENST00000509389 CWC27Q6UX04 472 aaKnown RBP17.09■□□□□ 0.33
HMGCL-208ENST00000509389 C16orf59Q7L2K0 433 aa17.09■□□□□ 0.33
HMGCL-208ENST00000509389 SLC43A3Q8NBI5 491 aa17.09■□□□□ 0.33
HMGCL-208ENST00000509389 VTA1Q9NP79 307 aa17.09■□□□□ 0.33
HMGCL-208ENST00000509389 Q9Y3F1 56 aa17.09■□□□□ 0.33
HMGCL-208ENST00000509389 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.08■□□□□ 0.32
HMGCL-208ENST00000509389 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.08■□□□□ 0.32
HMGCL-208ENST00000509389 CABYRO75952 493 aa17.08■□□□□ 0.32
HMGCL-208ENST00000509389 CD4P01730 458 aa17.08■□□□□ 0.32
HMGCL-208ENST00000509389 ZNF543Q08ER8 600 aa17.08■□□□□ 0.32
HMGCL-208ENST00000509389 PPIGQ13427 754 aaKnown RBP eCLIP17.08■□□□□ 0.32
HMGCL-208ENST00000509389 KIAA1211Q6ZU35 1233 aa17.08■□□□□ 0.32
HMGCL-208ENST00000509389 CLEC4DQ8WXI8 215 aa17.08■□□□□ 0.32
HMGCL-208ENST00000509389 MYLIPQ8WY64 445 aa17.08■□□□□ 0.32
HMGCL-208ENST00000509389 PPP1R12CQ9BZL4 782 aa17.08■□□□□ 0.32
HMGCL-208ENST00000509389 ADD3Q9UEY8 706 aaKnown RBP17.08■□□□□ 0.32
HMGCL-208ENST00000509389 TMEM265A0A087WTH1 108 aa17.07■□□□□ 0.32
HMGCL-208ENST00000509389 PTPDC1A2A3K4 754 aa17.07■□□□□ 0.32
HMGCL-208ENST00000509389 ZEB2O60315 1214 aa17.07■□□□□ 0.32
HMGCL-208ENST00000509389 SNHG28P0DPA3 235 aa17.07■□□□□ 0.32
HMGCL-208ENST00000509389 CSF2RAP15509 400 aa17.07■□□□□ 0.32
HMGCL-208ENST00000509389 ALDH5A1P51649 535 aaPredicted RBP17.07■□□□□ 0.32
HMGCL-208ENST00000509389 ITGA7Q13683 1181 aa17.07■□□□□ 0.32
HMGCL-208ENST00000509389 TMEM240Q5SV17 173 aa17.07■□□□□ 0.32
HMGCL-208ENST00000509389 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.07■□□□□ 0.32
HMGCL-208ENST00000509389 TMEM199Q8N511 208 aa17.07■□□□□ 0.32
HMGCL-208ENST00000509389 RNF41Q9H4P4 317 aaPredicted RBP17.07■□□□□ 0.32
HMGCL-208ENST00000509389 GRIN2DO15399 1336 aa17.07■□□□□ 0.32
HMGCL-208ENST00000509389 NEDD4P46934 1319 aa17.07■□□□□ 0.32
HMGCL-208ENST00000509389 LOC102724159A0A0B4J2E5 919 aa17.06■□□□□ 0.32
HMGCL-208ENST00000509389 PWP2Q15269 919 aaKnown RBP17.06■□□□□ 0.32
HMGCL-208ENST00000509389 SLC30A10Q6XR72 485 aa17.06■□□□□ 0.32
HMGCL-208ENST00000509389 ESR2Q92731 530 aa17.06■□□□□ 0.32
HMGCL-208ENST00000509389 KCNB2Q92953 911 aa17.06■□□□□ 0.32
HMGCL-208ENST00000509389 ZKSCAN3Q9BRR0 538 aa17.06■□□□□ 0.32
HMGCL-208ENST00000509389 ANO2Q9NQ90 1003 aa17.06■□□□□ 0.32
HMGCL-208ENST00000509389 UNC80Q8N2C7 3258 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 ZNF213O14771 459 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 ACRP10323 421 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 DNAJB2P25686 324 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 CALML3P27482 149 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 CYP2C18P33260 490 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 HSPA4P34932 840 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 ANP32AP39687 249 aaKnown RBP17.05■□□□□ 0.32
HMGCL-208ENST00000509389 ANAPC15P60006 121 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 PSMC6P62333 389 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 DUSP28Q4G0W2 176 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 RASIP1Q5U651 963 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 RNF207Q6ZRF8 634 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 MAFAQ8NHW3 353 aaPredicted RBP17.05■□□□□ 0.32
HMGCL-208ENST00000509389 SEZ6LQ9BYH1 1024 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 WDR11Q9BZH6 1224 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 PNMA2Q9UL42 364 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 WDR19Q8NEZ3 1342 aa17.05■□□□□ 0.32
HMGCL-208ENST00000509389 RBM47A0AV96 593 aaKnown RBP17.04■□□□□ 0.32
HMGCL-208ENST00000509389 GOLGA8HP0CJ92 632 aa17.04■□□□□ 0.32
HMGCL-208ENST00000509389 ZNF365Q70YC5 407 aa17.04■□□□□ 0.32
HMGCL-208ENST00000509389 DGKHQ86XP1 1220 aa17.04■□□□□ 0.32
HMGCL-208ENST00000509389 MAP4K1Q92918 833 aa17.04■□□□□ 0.32
HMGCL-208ENST00000509389 CDH23Q9H251 3354 aa17.04■□□□□ 0.32
HMGCL-208ENST00000509389 FOSL2P15408 326 aa17.03■□□□□ 0.32
HMGCL-208ENST00000509389 RPS6P62753 249 aaKnown RBP17.03■□□□□ 0.32
HMGCL-208ENST00000509389 GPATCH4Q5T3I0 446 aaKnown RBP17.03■□□□□ 0.32
HMGCL-208ENST00000509389 PSRC1Q6PGN9 363 aaPredicted RBP17.03■□□□□ 0.32
HMGCL-208ENST00000509389 UBA5Q9GZZ9 404 aa17.03■□□□□ 0.32
HMGCL-208ENST00000509389 TRPV6Q9H1D0 765 aa17.03■□□□□ 0.32
HMGCL-208ENST00000509389 CPVLQ9H3G5 476 aa17.03■□□□□ 0.32
HMGCL-208ENST00000509389 HIPK3Q9H422 1215 aa17.03■□□□□ 0.32
HMGCL-208ENST00000509389 IL23AQ9NPF7 189 aa17.03■□□□□ 0.32
HMGCL-208ENST00000509389 UMODL1Q5DID0 1318 aa17.03■□□□□ 0.32
HMGCL-208ENST00000509389 GRXCR1A8MXD5 290 aa17.02■□□□□ 0.32
HMGCL-208ENST00000509389 B4GALT4O60513 344 aa17.02■□□□□ 0.32
HMGCL-208ENST00000509389 KDM4AO75164 1064 aa17.02■□□□□ 0.32
HMGCL-208ENST00000509389 NT5C2P49902 561 aa17.02■□□□□ 0.32
HMGCL-208ENST00000509389 PTH1RQ03431 593 aa17.02■□□□□ 0.32
HMGCL-208ENST00000509389 GRIN2CQ14957 1233 aa17.02■□□□□ 0.32
HMGCL-208ENST00000509389 CCDC178Q5BJE1 867 aa17.02■□□□□ 0.32
HMGCL-208ENST00000509389 PNMA1Q8ND90 353 aa17.02■□□□□ 0.32
HMGCL-208ENST00000509389 TIFAQ96CG3 184 aa17.02■□□□□ 0.32
HMGCL-208ENST00000509389 COL25A1Q9BXS0 654 aaPredicted RBP17.02■□□□□ 0.32
HMGCL-208ENST00000509389 EDNRBP24530 442 aa17.02■□□□□ 0.31
HMGCL-208ENST00000509389 PDE4DQ08499 809 aa17.02■□□□□ 0.31
HMGCL-208ENST00000509389 NECTIN1Q15223 517 aa17.02■□□□□ 0.31
HMGCL-208ENST00000509389 USH1GQ495M9 461 aa17.02■□□□□ 0.31
HMGCL-208ENST00000509389 IQCA1Q86XH1 822 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms