RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 CLK2P49760 499 aaKnown RBP11.87□□□□□ -0.51
RFC1-211ENST00000509084 GHRHRQ02643 423 aa11.87□□□□□ -0.51
RFC1-211ENST00000509084 NOGQ13253 232 aa11.87□□□□□ -0.51
RFC1-211ENST00000509084 GSE1Q14687 1217 aa11.87□□□□□ -0.51
RFC1-211ENST00000509084 NONOQ15233 471 aaKnown RBP eCLIP11.87□□□□□ -0.51
RFC1-211ENST00000509084 SNRNP48Q6IEG0 339 aaKnown RBP11.87□□□□□ -0.51
RFC1-211ENST00000509084 CHST13Q8NET6 341 aa11.87□□□□□ -0.51
RFC1-211ENST00000509084 OXER1Q8TDS5 423 aa11.87□□□□□ -0.51
RFC1-211ENST00000509084 AGBL1Q96MI9 1066 aa11.87□□□□□ -0.51
RFC1-211ENST00000509084 P2RX7Q99572 595 aaKnown RBP11.87□□□□□ -0.51
RFC1-211ENST00000509084 NAP1L4Q99733 375 aaKnown RBP11.87□□□□□ -0.51
RFC1-211ENST00000509084 SCAND2PQ9GZW5 306 aaPredicted RBP11.87□□□□□ -0.51
RFC1-211ENST00000509084 FBXO40Q9UH90 709 aa11.87□□□□□ -0.51
RFC1-211ENST00000509084 PCDHA6Q9UN73 950 aa11.87□□□□□ -0.51
RFC1-211ENST00000509084 PCDHA8Q9Y5H6 950 aa11.87□□□□□ -0.51
RFC1-211ENST00000509084 SPDYE3A6NKU9 549 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 DDX11L8A8MPP1 907 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 FAM155AB1AL88 458 aaPredicted RBP11.86□□□□□ -0.51
RFC1-211ENST00000509084 YEATS4O95619 227 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 BMP15O95972 392 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 NCLP19338 710 aaKnown RBP11.86□□□□□ -0.51
RFC1-211ENST00000509084 STAT3P40763 770 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 CCNA1P78396 465 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 ORC2Q13416 577 aaPredicted RBP11.86□□□□□ -0.51
RFC1-211ENST00000509084 TMEM132BQ14DG7 1078 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 PIK3AP1Q6ZUJ8 805 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 PAXIP1Q6ZW49 1069 aaPredicted RBP11.86□□□□□ -0.51
RFC1-211ENST00000509084 RIOX2Q8IUF8 465 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 TRERF1Q96PN7 1200 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 SPATC1LQ9H0A9 340 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 ACAD9Q9H845 621 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 RNF146Q9NTX7 359 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 POLR3EQ9NVU0 708 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 CEP131Q9UPN4 1083 aa11.86□□□□□ -0.51
RFC1-211ENST00000509084 MEIS2O14770 477 aa11.85□□□□□ -0.51
RFC1-211ENST00000509084 CFBP00751 764 aa11.85□□□□□ -0.51
RFC1-211ENST00000509084 HSD17B4P51659 736 aa11.85□□□□□ -0.51
RFC1-211ENST00000509084 DNM1Q05193 864 aaKnown RBP11.85□□□□□ -0.51
RFC1-211ENST00000509084 PLS1Q14651 629 aa11.85□□□□□ -0.51
RFC1-211ENST00000509084 DEFB115Q30KQ5 88 aa11.85□□□□□ -0.51
RFC1-211ENST00000509084 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.85□□□□□ -0.51
RFC1-211ENST00000509084 NEK8Q86SG6 692 aa11.85□□□□□ -0.51
RFC1-211ENST00000509084 FAM43AQ8N2R8 423 aa11.85□□□□□ -0.51
RFC1-211ENST00000509084 SHCBP1Q8NEM2 672 aa11.85□□□□□ -0.51
RFC1-211ENST00000509084 PAGR1Q9BTK6 254 aa11.85□□□□□ -0.51
RFC1-211ENST00000509084 ANO3Q9BYT9 981 aa11.85□□□□□ -0.51
RFC1-211ENST00000509084 OPLAHO14841 1288 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 MAP3K13O43283 966 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 ALDH1A1P00352 501 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 NASPP49321 788 aaPredicted RBP11.84□□□□□ -0.51
RFC1-211ENST00000509084 ERVK-9P63128 1117 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 ERVK-24P63145 666 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 UBE2SQ16763 222 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 FOXD4L6Q3SYB3 417 aaPredicted RBP11.84□□□□□ -0.51
RFC1-211ENST00000509084 TTC38Q5R3I4 469 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 JAKMIP3Q5VZ66 844 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 ANO1Q5XXA6 986 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 FOXD4L3Q6VB84 417 aaPredicted RBP11.84□□□□□ -0.51
RFC1-211ENST00000509084 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 TMEM87AQ8NBN3 555 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 RASGRP4Q8TDF6 673 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 CLEC4DQ8WXI8 215 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 SPATA32Q96LK8 384 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 USP28Q96RU2 1077 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 MROH8Q9H579 483 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 HOMER2Q9NSB8 354 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 RTEL1Q9NZ71 1219 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 BTBD7Q9P203 1132 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 MORF4L1Q9UBU8 362 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 BIN2Q9UBW5 565 aaPredicted RBP11.84□□□□□ -0.51
RFC1-211ENST00000509084 MORC2Q9Y6X9 1032 aaPredicted RBP11.84□□□□□ -0.51
RFC1-211ENST00000509084 PFASO15067 1338 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 ELP1O95163 1332 aa11.84□□□□□ -0.51
RFC1-211ENST00000509084 NFIBO00712 420 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 FIBPO43427 364 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 CNMDO75829 334 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 CYP2C8P10632 490 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 GCFC2P16383 781 aaKnown RBP11.83□□□□□ -0.52
RFC1-211ENST00000509084 TM4SF4P48230 202 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 TAF1CQ15572 869 aaPredicted RBP11.83□□□□□ -0.52
RFC1-211ENST00000509084 FAM110CQ1W6H9 321 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 MUM1L1Q5H9M0 696 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 CYP4F22Q6NT55 531 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 FAM173BQ6P4H8 233 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 USP17L6PQ6QN14 398 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 MOXD1Q6UVY6 613 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 RNF207Q6ZRF8 634 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 JMYQ8N9B5 988 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 GPRC5AQ8NFJ5 357 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 KCNG4Q8TDN1 519 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 TBCKQ8TEA7 893 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 CAPNS2Q96L46 248 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 PTPN18Q99952 460 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 MOV10L1Q9BXT6 1211 aaKnown RBP11.83□□□□□ -0.52
RFC1-211ENST00000509084 TMEM260Q9NX78 707 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 RBPJLQ9UBG7 517 aa11.83□□□□□ -0.52
RFC1-211ENST00000509084 IGF2BP3O00425 579 aaKnown RBP eCLIP11.82□□□□□ -0.52
RFC1-211ENST00000509084 LAD1O00515 517 aa11.82□□□□□ -0.52
RFC1-211ENST00000509084 TAL1P17542 331 aaPredicted RBP11.82□□□□□ -0.52
RFC1-211ENST00000509084 MCM4P33991 863 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms