RNA–Protein interactions for RNA: ENST00000509055.1

AP3S1-206, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-206ENST00000509055 CRTAC1Q9NQ79 661 aa3.92□□□□□ -1.78
AP3S1-206ENST00000509055 RNF114Q9Y508 228 aa3.92□□□□□ -1.78
AP3S1-206ENST00000509055 ADAMTS20P59510 1910 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 BLACEA4D250 179 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 WTIPA6NIX2 430 aaPredicted RBP3.91□□□□□ -1.78
AP3S1-206ENST00000509055 CCDC85CA6NKD9 419 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 MSCO60682 206 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 GLI4P10075 376 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 FGFR1P11362 822 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 RAC2P15153 192 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 SEPHS1P49903 392 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 YBX1P67809 324 aaKnown RBP3.91□□□□□ -1.78
AP3S1-206ENST00000509055 MLANAQ16655 118 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 HLA-DQA1Q5Y7H0 255 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 GALNT18Q6P9A2 607 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 POMZP3Q6PJE2 187 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 CYP2R1Q6VVX0 501 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 ASXL2Q76L83 1435 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 LRP10Q7Z4F1 713 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 Q8N1Y9 231 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 RCBTB1Q8NDN9 531 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 PPP1R14AQ96A00 147 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 IER2Q9BTL4 223 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 SPATA9Q9BWV2 254 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 ZNF552Q9H707 407 aaPredicted RBP3.91□□□□□ -1.78
AP3S1-206ENST00000509055 KLHL14Q9P2G3 628 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 PFDN2Q9UHV9 154 aa3.91□□□□□ -1.78
AP3S1-206ENST00000509055 NPHP3-ACAD11A0A0J9YXS1 232 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 LRRC10BA6NIK2 292 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 NOP56O00567 594 aaKnown RBP3.9□□□□□ -1.79
AP3S1-206ENST00000509055 SNRPB2P08579 225 aaKnown RBP3.9□□□□□ -1.79
AP3S1-206ENST00000509055 NAT2P11245 290 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 PABPC1P11940 636 aaKnown RBP3.9□□□□□ -1.79
AP3S1-206ENST00000509055 PAMP19021 973 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 ENDOUP21128 410 aaKnown RBP3.9□□□□□ -1.79
AP3S1-206ENST00000509055 FBLN1P23142 703 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 L1CAMP32004 1257 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 ECI1P42126 302 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 CCDC144BQ3MJ40 725 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 FAM209AQ5JX71 171 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 ZNF648Q5T619 568 aaPredicted RBP3.9□□□□□ -1.79
AP3S1-206ENST00000509055 ACBD5Q5T8D3 534 aaPredicted RBP3.9□□□□□ -1.79
AP3S1-206ENST00000509055 RPTNQ6XPR3 784 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 IRF2BP1Q8IU81 584 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 ZBTB38Q8NAP3 1195 aaPredicted RBP3.9□□□□□ -1.79
AP3S1-206ENST00000509055 NUP43Q8NFH3 380 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 KISS1RQ969F8 398 aaPredicted RBP3.9□□□□□ -1.79
AP3S1-206ENST00000509055 MCOLN1Q9GZU1 580 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 OSBPL2Q9H1P3 480 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 GULP1Q9UBP9 304 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 PPP1R1BQ9UD71 204 aaPredicted RBP3.9□□□□□ -1.79
AP3S1-206ENST00000509055 CDK11AQ9UQ88 783 aaPredicted RBP3.9□□□□□ -1.79
AP3S1-206ENST00000509055 R3HCC1Q9Y3T6 440 aaKnown RBP3.9□□□□□ -1.79
AP3S1-206ENST00000509055 RWDD3Q9Y3V2 267 aa3.9□□□□□ -1.79
AP3S1-206ENST00000509055 PRODHO43272 600 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 TBC1D8O95759 1140 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 DBHP09172 617 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 TACR1P25103 407 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 CORO7P57737 925 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 CYP4F8P98187 520 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 MAP4K2Q12851 820 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 SQSTM1Q13501 440 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 LAPTM5Q13571 262 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 CBX2Q14781 532 aaPredicted RBP3.89□□□□□ -1.79
AP3S1-206ENST00000509055 SLC14A2Q15849 920 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 ADGRF1Q5T601 910 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 KCNT2Q6UVM3 1135 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 DPH6Q7L8W6 267 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 NAT16Q8N8M0 369 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 UBXN4Q92575 508 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 CCDC140Q96MF4 163 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 DIRC2Q96SL1 478 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 AARSD1Q9BTE6 412 aaKnown RBP3.89□□□□□ -1.79
AP3S1-206ENST00000509055 NSUN3Q9H649 340 aaKnown RBP3.89□□□□□ -1.79
AP3S1-206ENST00000509055 RXFP1Q9HBX9 757 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 EPB41L4AQ9HCS5 686 aaPredicted RBP3.89□□□□□ -1.79
AP3S1-206ENST00000509055 PDLIM7Q9NR12 457 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 LRP2BPQ9P2M1 347 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 PPARGC1AQ9UBK2 798 aaKnown RBP3.89□□□□□ -1.79
AP3S1-206ENST00000509055 MBD1Q9UIS9 605 aaPredicted RBP3.89□□□□□ -1.79
AP3S1-206ENST00000509055 TAF6LQ9Y6J9 622 aa3.89□□□□□ -1.79
AP3S1-206ENST00000509055 SRGAP3O43295 1099 aa3.88□□□□□ -1.79
AP3S1-206ENST00000509055 FPR2P25090 351 aa3.88□□□□□ -1.79
AP3S1-206ENST00000509055 VIPR1P32241 457 aa3.88□□□□□ -1.79
AP3S1-206ENST00000509055 SSRP1Q08945 709 aaKnown RBP3.88□□□□□ -1.79
AP3S1-206ENST00000509055 HSP90AA2PQ14568 343 aaPredicted RBP3.88□□□□□ -1.79
AP3S1-206ENST00000509055 BMS1Q14692 1282 aaKnown RBP3.88□□□□□ -1.79
AP3S1-206ENST00000509055 MTERF2Q49AM1 385 aa3.88□□□□□ -1.79
AP3S1-206ENST00000509055 E4F1Q66K89 784 aaPredicted RBP3.88□□□□□ -1.79
AP3S1-206ENST00000509055 PPIL6Q8IXY8 311 aa3.88□□□□□ -1.79
AP3S1-206ENST00000509055 CRACR2BQ8N4Y2 399 aaPredicted RBP3.88□□□□□ -1.79
AP3S1-206ENST00000509055 SRPK1Q96SB4 655 aaKnown RBP3.88□□□□□ -1.79
AP3S1-206ENST00000509055 SGPP1Q9BX95 441 aa3.88□□□□□ -1.79
AP3S1-206ENST00000509055 SLC6A17Q9H1V8 727 aa3.88□□□□□ -1.79
AP3S1-206ENST00000509055 CNTD2Q9H8S5 307 aa3.88□□□□□ -1.79
AP3S1-206ENST00000509055 SIT1Q9Y3P8 196 aa3.88□□□□□ -1.79
AP3S1-206ENST00000509055 KDM2BQ8NHM5 1336 aa3.88□□□□□ -1.79
AP3S1-206ENST00000509055 IRS2Q9Y4H2 1338 aa3.88□□□□□ -1.79
AP3S1-206ENST00000509055 CPP00450 1065 aa3.87□□□□□ -1.79
AP3S1-206ENST00000509055 C8AP07357 584 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms