RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 TRIB2Q92519 343 aa10.55□□□□□ -0.72
NUP54-207ENST00000508583 TINF2Q9BSI4 451 aa10.55□□□□□ -0.72
NUP54-207ENST00000508583 BACH2Q9BYV9 841 aa10.55□□□□□ -0.72
NUP54-207ENST00000508583 HMX1Q9NP08 348 aaPredicted RBP10.55□□□□□ -0.72
NUP54-207ENST00000508583 CNPY2Q9Y2B0 182 aa10.55□□□□□ -0.72
NUP54-207ENST00000508583 CNTNAP5Q8WYK1 1306 aa10.55□□□□□ -0.72
NUP54-207ENST00000508583 CCDC85CA6NKD9 419 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 NFIBO00712 420 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 PRKAR2AP13861 404 aaKnown RBP10.54□□□□□ -0.72
NUP54-207ENST00000508583 IFNAR1P17181 557 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 CALML3P27482 149 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 MCM2P49736 904 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 AK2P54819 239 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 RPS6P62753 249 aaKnown RBP10.54□□□□□ -0.72
NUP54-207ENST00000508583 BAATQ14032 418 aaPredicted RBP10.54□□□□□ -0.72
NUP54-207ENST00000508583 MAP3K21Q5TCX8 1036 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 MAMDC4Q6UXC1 1216 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 HEATR3Q7Z4Q2 680 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 RAB11FIP4Q86YS3 637 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 FAM177A1Q8N128 213 aaPredicted RBP10.54□□□□□ -0.72
NUP54-207ENST00000508583 CCDC82Q8N4S0 544 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 FAM133AQ8N9E0 248 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 NPLOC4Q8TAT6 608 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 CLEC4DQ8WXI8 215 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 TBC1D32Q96NH3 1257 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 RNF26Q9BY78 433 aaPredicted RBP10.54□□□□□ -0.72
NUP54-207ENST00000508583 RNF208Q9H0X6 261 aa10.54□□□□□ -0.72
NUP54-207ENST00000508583 GCOM1H8Y6P7 765 aaPredicted RBP10.53□□□□□ -0.72
NUP54-207ENST00000508583 PRPF3O43395 683 aaKnown RBP10.53□□□□□ -0.72
NUP54-207ENST00000508583 CFBP00751 764 aa10.53□□□□□ -0.72
NUP54-207ENST00000508583 MYCP01106 439 aaPredicted RBP10.53□□□□□ -0.72
NUP54-207ENST00000508583 POLR2MP0CAP2 368 aa10.53□□□□□ -0.72
NUP54-207ENST00000508583 CCL5P13501 91 aa10.53□□□□□ -0.72
NUP54-207ENST00000508583 XBP1P17861 261 aa10.53□□□□□ -0.72
NUP54-207ENST00000508583 ADD1P35611 737 aaKnown RBP10.53□□□□□ -0.72
NUP54-207ENST00000508583 HSD17B4P51659 736 aa10.53□□□□□ -0.72
NUP54-207ENST00000508583 GHRHRQ02643 423 aa10.53□□□□□ -0.72
NUP54-207ENST00000508583 SSRP1Q08945 709 aaKnown RBP10.53□□□□□ -0.72
NUP54-207ENST00000508583 CCL14Q16627 93 aa10.53□□□□□ -0.72
NUP54-207ENST00000508583 MCTP2Q6DN12 878 aa10.53□□□□□ -0.72
NUP54-207ENST00000508583 CCDC148Q8NFR7 591 aa10.53□□□□□ -0.72
NUP54-207ENST00000508583 NSUN6Q8TEA1 469 aaKnown RBP10.53□□□□□ -0.72
NUP54-207ENST00000508583 PIBF1Q8WXW3 757 aa10.53□□□□□ -0.72
NUP54-207ENST00000508583 ZSCAN31Q96LW9 406 aaPredicted RBP10.53□□□□□ -0.72
NUP54-207ENST00000508583 ABHD16BQ9H3Z7 469 aa10.53□□□□□ -0.72
NUP54-207ENST00000508583 EHMT1Q9H9B1 1298 aa10.53□□□□□ -0.72
NUP54-207ENST00000508583 SH2B1Q9NRF2 756 aaPredicted RBP10.53□□□□□ -0.72
NUP54-207ENST00000508583 LIMCH1Q9UPQ0 1083 aa10.53□□□□□ -0.72
NUP54-207ENST00000508583 V9GY48 417 aaPredicted RBP10.53□□□□□ -0.72
NUP54-207ENST00000508583 PIK3CDO00329 1044 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 PFKFB2O60825 505 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 PPP1R11O60927 126 aaPredicted RBP10.52□□□□□ -0.73
NUP54-207ENST00000508583 GJB1P08034 283 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 SCG2P13521 617 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 TAL1P17542 331 aaPredicted RBP10.52□□□□□ -0.73
NUP54-207ENST00000508583 CDC27P30260 824 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 NAPAP54920 295 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 CCT2P78371 535 aaKnown RBP10.52□□□□□ -0.73
NUP54-207ENST00000508583 CACNB2Q08289 660 aaPredicted RBP10.52□□□□□ -0.73
NUP54-207ENST00000508583 FUT2Q10981 343 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 STK3Q13188 491 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 PFKFB3Q16875 520 aaPredicted RBP10.52□□□□□ -0.73
NUP54-207ENST00000508583 ARMCX2Q7L311 632 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 CMTR1Q8N1G2 835 aaKnown RBP10.52□□□□□ -0.73
NUP54-207ENST00000508583 SMARCC2Q8TAQ2 1214 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 BICD2Q8TD16 824 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 WASF1Q92558 559 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 IWS1Q96ST2 819 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 SLC26A6Q9BXS9 759 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.52□□□□□ -0.73
NUP54-207ENST00000508583 PSTPIP2Q9H939 334 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 FAM217BQ9NTX9 383 aaPredicted RBP10.52□□□□□ -0.73
NUP54-207ENST00000508583 BARHL2Q9NY43 387 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 TPCN1Q9ULQ1 816 aa10.52□□□□□ -0.73
NUP54-207ENST00000508583 KIAA0100Q14667 2235 aaKnown RBP10.52□□□□□ -0.73
NUP54-207ENST00000508583 SMCHD1A6NHR9 2005 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 SEPT4O43236 478 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 DEXIO95424 95 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 IGHA2P01877 340 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 CYBAP13498 195 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 AKR1A1P14550 325 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 CNGA1P29973 690 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 GNA11P29992 359 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 CYP2C19P33261 490 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 ALDH5A1P51649 535 aaPredicted RBP10.51□□□□□ -0.73
NUP54-207ENST00000508583 SOX10P56693 466 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 CNTN2Q02246 1040 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 PDE4DQ08499 809 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 SLC35G1Q2M3R5 365 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 ARHGEF16Q5VV41 709 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 SLC30A10Q6XR72 485 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 SYTL5Q8TDW5 730 aaPredicted RBP10.51□□□□□ -0.73
NUP54-207ENST00000508583 RMDN3Q96TC7 470 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 VTA1Q9NP79 307 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 PAK6Q9NQU5 681 aaPredicted RBP10.51□□□□□ -0.73
NUP54-207ENST00000508583 SH3GLB2Q9NR46 395 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.51□□□□□ -0.73
NUP54-207ENST00000508583 FLRT1Q9NZU1 646 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 STK36Q9NRP7 1315 aa10.51□□□□□ -0.73
NUP54-207ENST00000508583 BRCA2P51587 3418 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms