RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 NUP88Q99567 741 aaPredicted RBP16.28■□□□□ 0.2
DDX41-208ENST00000507955 PYM1Q9BRP8 204 aaKnown RBP16.28■□□□□ 0.2
DDX41-208ENST00000507955 FHOD1Q9Y613 1164 aa16.28■□□□□ 0.2
DDX41-208ENST00000507955 TERF2Q15554 542 aa16.27■□□□□ 0.2
DDX41-208ENST00000507955 ASPRV1Q53RT3 343 aa16.27■□□□□ 0.2
DDX41-208ENST00000507955 CT47A1Q5JQC4 288 aaPredicted RBP16.27■□□□□ 0.2
DDX41-208ENST00000507955 ZNF771Q7L3S4 317 aaPredicted RBP16.27■□□□□ 0.2
DDX41-208ENST00000507955 SLC39A2Q9NP94 309 aa16.27■□□□□ 0.2
DDX41-208ENST00000507955 FAM198AQ9UFP1 575 aa16.27■□□□□ 0.2
DDX41-208ENST00000507955 COL11A2P13942 1736 aaPredicted RBP16.27■□□□□ 0.2
DDX41-208ENST00000507955 MYH8P13535 1937 aa16.27■□□□□ 0.19
DDX41-208ENST00000507955 LRRC10BA6NIK2 292 aa16.27■□□□□ 0.19
DDX41-208ENST00000507955 LAD1O00515 517 aa16.27■□□□□ 0.19
DDX41-208ENST00000507955 TADA3O75528 432 aa16.27■□□□□ 0.19
DDX41-208ENST00000507955 KLK7P49862 253 aa16.27■□□□□ 0.19
DDX41-208ENST00000507955 MCM6Q14566 821 aa16.27■□□□□ 0.19
DDX41-208ENST00000507955 AOC3Q16853 763 aa16.27■□□□□ 0.19
DDX41-208ENST00000507955 KCNK18Q7Z418 384 aa16.27■□□□□ 0.19
DDX41-208ENST00000507955 GIMAP8Q8ND71 665 aaPredicted RBP16.27■□□□□ 0.19
DDX41-208ENST00000507955 MTMR9Q96QG7 549 aa16.27■□□□□ 0.19
DDX41-208ENST00000507955 CARD6Q9BX69 1037 aa16.27■□□□□ 0.19
DDX41-208ENST00000507955 TMX4Q9H1E5 349 aaPredicted RBP16.27■□□□□ 0.19
DDX41-208ENST00000507955 LRWD1Q9UFC0 647 aa16.27■□□□□ 0.19
DDX41-208ENST00000507955 FOCADQ5VW36 1801 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 ECE2O60344 883 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 RHOBTB3O94955 611 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 EEF2P13639 858 aaKnown RBP16.26■□□□□ 0.19
DDX41-208ENST00000507955 ERVK-24P63145 666 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 GRB10Q13322 594 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 ECM1Q16610 540 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 HHIPL2Q6UWX4 724 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 TFRCP02786 760 aaKnown RBP16.26■□□□□ 0.19
DDX41-208ENST00000507955 TUBB4AP04350 444 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 HLA-DOAP06340 250 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 JAG1P78504 1218 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 ANKRD40Q6AI12 368 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 GPIHBP1Q8IV16 184 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 GLIS3Q8NEA6 775 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 PNMA5Q96PV4 448 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 PANX2Q96RD6 677 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 CHP1Q99653 195 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 DUSP9Q99956 384 aaKnown RBP16.26■□□□□ 0.19
DDX41-208ENST00000507955 BLOC1S4Q9NUP1 217 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 ADGRG1Q9Y653 693 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 SCN9AQ15858 1988 aa16.26■□□□□ 0.19
DDX41-208ENST00000507955 PLIN4Q96Q06 1357 aa16.25■□□□□ 0.19
DDX41-208ENST00000507955 PNMA6FA0A0J9YX94 578 aa16.25■□□□□ 0.19
DDX41-208ENST00000507955 CCP110O43303 1012 aa16.25■□□□□ 0.19
DDX41-208ENST00000507955 SEPT2Q15019 361 aa16.25■□□□□ 0.19
DDX41-208ENST00000507955 PDGFDQ9GZP0 370 aaPredicted RBP16.25■□□□□ 0.19
DDX41-208ENST00000507955 TDRD3Q9H7E2 651 aaKnown RBP16.25■□□□□ 0.19
DDX41-208ENST00000507955 TFR2Q9UP52 801 aa16.25■□□□□ 0.19
DDX41-208ENST00000507955 SUGT1Q9Y2Z0 365 aa16.25■□□□□ 0.19
DDX41-208ENST00000507955 B4DLN1 442 aa16.25■□□□□ 0.19
DDX41-208ENST00000507955 SMARCA1P28370 1054 aa16.25■□□□□ 0.19
DDX41-208ENST00000507955 TTI2Q6NXR4 508 aa16.25■□□□□ 0.19
DDX41-208ENST00000507955 FCHSD1Q86WN1 690 aa16.25■□□□□ 0.19
DDX41-208ENST00000507955 SIAH1Q8IUQ4 282 aa16.25■□□□□ 0.19
DDX41-208ENST00000507955 MYMKA6NI61 221 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 KRT9P35527 623 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 KCNB1Q14721 858 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 DACT2Q5SW24 774 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 CSGALNACT2Q8N6G5 542 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 KIAA0895Q8NCT3 520 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 ABHD10Q9NUJ1 306 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 EXOC1Q9NV70 894 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 SWAP70Q9UH65 585 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 H7C1D1 291 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 PLSCR1O15162 318 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 PNMA6AP0CW24 399 aaPredicted RBP16.24■□□□□ 0.19
DDX41-208ENST00000507955 CASQ1P31415 396 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 CERKLQ49MI3 558 aaPredicted RBP16.24■□□□□ 0.19
DDX41-208ENST00000507955 PODNQ7Z5L7 613 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 AK8Q96MA6 479 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 ZSWIM4Q9H7M6 989 aa16.24■□□□□ 0.19
DDX41-208ENST00000507955 TTC26A0AVF1 554 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 ESYT2A0FGR8 921 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 PSMA7O14818 248 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 ZBTB5O15062 677 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 ZRANB2O95218 330 aaKnown RBP eCLIP16.23■□□□□ 0.19
DDX41-208ENST00000507955 CCDC175P0C221 793 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 PLA2G4AP47712 749 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 LRRC41Q15345 812 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 UBXN4Q92575 508 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 HAS1Q92839 578 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 CALML4Q96GE6 196 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 ZDHHC15Q96MV8 337 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 PSTPIP2Q9H939 334 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 H0YIN7 160 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 SEC31AO94979 1220 aaKnown RBP16.23■□□□□ 0.19
DDX41-208ENST00000507955 IDEP14735 1019 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 SLC1A4P43007 532 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 QRICH1Q2TAL8 776 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 SNX29Q8TEQ0 813 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 KIFC2Q96AC6 838 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 P2RX7Q99572 595 aaKnown RBP16.23■□□□□ 0.19
DDX41-208ENST00000507955 SLF1Q9BQI6 1058 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 RIC8AQ9NPQ8 531 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 SLX4Q8IY92 1834 aa16.23■□□□□ 0.19
DDX41-208ENST00000507955 NRXN2Q9P2S2 1712 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms