RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 CCDC42Q96M95 316 aa16.76■□□□□ 0.27
HERC6-206ENST00000506714 C7orf25Q9BPX7 421 aa16.76■□□□□ 0.27
HERC6-206ENST00000506714 NOC4LQ9BVI4 516 aaKnown RBP16.76■□□□□ 0.27
HERC6-206ENST00000506714 TMEM60Q9H2L4 133 aa16.76■□□□□ 0.27
HERC6-206ENST00000506714 LY75O60449 1722 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 RCCD1A6NED2 376 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 HNRNPH3P31942 346 aaKnown RBP16.75■□□□□ 0.27
HERC6-206ENST00000506714 PDE4DQ08499 809 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 GRM4Q14833 912 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 PNMA1Q8ND90 353 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 GPKOWQ92917 476 aaPredicted RBP eCLIP16.75■□□□□ 0.27
HERC6-206ENST00000506714 SNX12Q9UMY4 172 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 TFR2Q9UP52 801 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 BRWD3Q6RI45 1802 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 PP2D1A8MPX8 630 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 GGCXP38435 758 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 CORO7P57737 925 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 ANKRD40Q6AI12 368 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 FOXR1Q6PIV2 292 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 CABP7Q86V35 215 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 FAM76AQ8TAV0 307 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 FAM107BQ9H098 131 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 MINPP1Q9UNW1 487 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 TAF1P21675 1872 aa16.75■□□□□ 0.27
HERC6-206ENST00000506714 MYH10P35580 1976 aa16.74■□□□□ 0.27
HERC6-206ENST00000506714 COL4A1P02462 1669 aa16.74■□□□□ 0.27
HERC6-206ENST00000506714 SHOX2O60902 331 aaPredicted RBP16.74■□□□□ 0.27
HERC6-206ENST00000506714 INF2Q27J81 1249 aa16.74■□□□□ 0.27
HERC6-206ENST00000506714 DNAJC21Q5F1R6 531 aaKnown RBP16.74■□□□□ 0.27
HERC6-206ENST00000506714 RASGRP4Q8TDF6 673 aa16.74■□□□□ 0.27
HERC6-206ENST00000506714 AENQ8WTP8 325 aaKnown RBP16.74■□□□□ 0.27
HERC6-206ENST00000506714 TRIM9Q9C026 710 aa16.74■□□□□ 0.27
HERC6-206ENST00000506714 PLAGL2Q9UPG8 496 aa16.74■□□□□ 0.27
HERC6-206ENST00000506714 TAF1LQ8IZX4 1826 aa16.74■□□□□ 0.27
HERC6-206ENST00000506714 MACROD2A1Z1Q3 448 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 GOLGA6BA6NDN3 693 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 PDE2AO00408 941 aaPredicted RBP16.73■□□□□ 0.27
HERC6-206ENST00000506714 SF3B2Q13435 895 aaKnown RBP16.73■□□□□ 0.27
HERC6-206ENST00000506714 MIIPQ5JXC2 388 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 CNNM4Q6P4Q7 775 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 ZBTB9Q96C00 473 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 LZTS2Q9BRK4 669 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 BARHL2Q9NY43 387 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 ZNF185O15231 689 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 TCP1P17987 556 aaKnown RBP16.73■□□□□ 0.27
HERC6-206ENST00000506714 PLCG1P19174 1290 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 TFAP4Q01664 338 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 CCDC96Q2M329 555 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 CLEC4GQ6UXB4 293 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 PPM1EQ8WY54 764 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 FLT1P17948 1338 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 CNTNAP4Q9C0A0 1308 aa16.73■□□□□ 0.27
HERC6-206ENST00000506714 GOLGA6CA6NDK9 693 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 AGPSO00116 658 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 LCA5LO95447 670 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 FGFR1OPO95684 399 aaKnown RBP16.72■□□□□ 0.27
HERC6-206ENST00000506714 GOLGA6DP0CG33 693 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 CYP2D6P10635 497 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 HOXA7P31268 230 aaPredicted RBP16.72■□□□□ 0.27
HERC6-206ENST00000506714 ASIC1P78348 528 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 CYP27A1Q02318 531 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 GBP6Q6ZN66 633 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 CREG2Q8IUH2 290 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 ALS2CR12Q96Q35 445 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 PLIN2Q99541 437 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 IFIH1Q9BYX4 1025 aaKnown RBP16.72■□□□□ 0.27
HERC6-206ENST00000506714 SH2D4AQ9H788 454 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 GOLGA6AQ9NYA3 693 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 MAD2L2Q9UI95 211 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 CCNL1Q9UK58 526 aaPredicted RBP16.72■□□□□ 0.27
HERC6-206ENST00000506714 DUSP10Q9Y6W6 482 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 ABCB11O95342 1321 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 VGLL3A8MV65 326 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 ZMYND10O75800 440 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 OR52Z1P0C646 297 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 KLK7P49862 253 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 EVX2Q03828 476 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 C2orf54Q08AI8 447 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 TYW1BQ6NUM6 668 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 KRT25Q7Z3Z0 450 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 CCDC84Q86UT8 332 aaPredicted RBP16.72■□□□□ 0.27
HERC6-206ENST00000506714 STAG2Q8N3U4 1231 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 MCM9Q9NXL9 1143 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 LRWD1Q9UFC0 647 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 PCDHA13Q9Y5I0 950 aa16.72■□□□□ 0.27
HERC6-206ENST00000506714 A6NNZ2 444 aa16.71■□□□□ 0.27
HERC6-206ENST00000506714 GOLGA8KD6RF30 607 aa16.71■□□□□ 0.27
HERC6-206ENST00000506714 STXBP3O00186 592 aa16.71■□□□□ 0.27
HERC6-206ENST00000506714 OPA1O60313 960 aa16.71■□□□□ 0.27
HERC6-206ENST00000506714 MYBL2P10244 700 aa16.71■□□□□ 0.27
HERC6-206ENST00000506714 STK4Q13043 487 aa16.71■□□□□ 0.27
HERC6-206ENST00000506714 PPFIA1Q13136 1202 aa16.71■□□□□ 0.27
HERC6-206ENST00000506714 TUBB8Q3ZCM7 444 aa16.71■□□□□ 0.27
HERC6-206ENST00000506714 HEATR3Q7Z4Q2 680 aa16.71■□□□□ 0.27
HERC6-206ENST00000506714 EFCAB13Q8IY85 973 aa16.71■□□□□ 0.27
HERC6-206ENST00000506714 IL17RBQ9NRM6 502 aa16.71■□□□□ 0.27
HERC6-206ENST00000506714 WTIPA6NIX2 430 aaPredicted RBP16.71■□□□□ 0.27
HERC6-206ENST00000506714 HIBADHP31937 336 aaKnown RBP16.71■□□□□ 0.27
HERC6-206ENST00000506714 ORC2Q13416 577 aaPredicted RBP16.71■□□□□ 0.27
HERC6-206ENST00000506714 C12orf60Q5U649 245 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms