RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 PPP2R5DQ14738 602 aa8.38□□□□□ -1.07
CHD1-204ENST00000505982 NBPF9Q3BBW0 867 aa8.38□□□□□ -1.07
CHD1-204ENST00000505982 SCUBE1Q8IWY4 988 aa8.38□□□□□ -1.07
CHD1-204ENST00000505982 RELTQ969Z4 430 aa8.38□□□□□ -1.07
CHD1-204ENST00000505982 VWCEQ96DN2 955 aa8.38□□□□□ -1.07
CHD1-204ENST00000505982 C20orf173Q96LM9 149 aa8.38□□□□□ -1.07
CHD1-204ENST00000505982 DSCC1Q9BVC3 393 aa8.38□□□□□ -1.07
CHD1-204ENST00000505982 KRTAP9-3Q9BYQ3 159 aa8.38□□□□□ -1.07
CHD1-204ENST00000505982 BRINP2Q9C0B6 783 aa8.38□□□□□ -1.07
CHD1-204ENST00000505982 MCOLN1Q9GZU1 580 aa8.38□□□□□ -1.07
CHD1-204ENST00000505982 NOL6Q9H6R4 1146 aaKnown RBP8.38□□□□□ -1.07
CHD1-204ENST00000505982 PARD6AQ9NPB6 346 aa8.38□□□□□ -1.07
CHD1-204ENST00000505982 SHOXO15266 292 aa8.37□□□□□ -1.07
CHD1-204ENST00000505982 SEMA7AO75326 666 aa8.37□□□□□ -1.07
CHD1-204ENST00000505982 KCNH1O95259 989 aa8.37□□□□□ -1.07
CHD1-204ENST00000505982 CBX2Q14781 532 aaPredicted RBP8.37□□□□□ -1.07
CHD1-204ENST00000505982 TMEM132EQ6IEE7 984 aa8.37□□□□□ -1.07
CHD1-204ENST00000505982 NSMFQ6X4W1 530 aa8.37□□□□□ -1.07
CHD1-204ENST00000505982 ZNF605Q86T29 641 aa8.37□□□□□ -1.07
CHD1-204ENST00000505982 TSPYL5Q86VY4 417 aaPredicted RBP8.37□□□□□ -1.07
CHD1-204ENST00000505982 DHX37Q8IY37 1157 aaKnown RBP8.37□□□□□ -1.07
CHD1-204ENST00000505982 NIM1KQ8IY84 436 aa8.37□□□□□ -1.07
CHD1-204ENST00000505982 MFSD3Q96ES6 412 aa8.37□□□□□ -1.07
CHD1-204ENST00000505982 ASCC2Q9H1I8 757 aaPredicted RBP8.37□□□□□ -1.07
CHD1-204ENST00000505982 CGGBP1Q9UFW8 167 aaPredicted RBP8.37□□□□□ -1.07
CHD1-204ENST00000505982 IRS4O14654 1257 aaPredicted RBP8.36□□□□□ -1.07
CHD1-204ENST00000505982 TBX1O43435 398 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 LRRN2O75325 713 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 PABPC1P11940 636 aaKnown RBP8.36□□□□□ -1.07
CHD1-204ENST00000505982 LTKP29376 864 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 CNGA1P29973 690 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 ZNF445P59923 1031 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 SUMO1P63165 101 aaKnown RBP8.36□□□□□ -1.07
CHD1-204ENST00000505982 PABPC4Q13310 644 aaKnown RBP eCLIP8.36□□□□□ -1.07
CHD1-204ENST00000505982 SNW1Q13573 536 aaKnown RBP8.36□□□□□ -1.07
CHD1-204ENST00000505982 NR0B2Q15466 257 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 SPPL2CQ8IUH8 684 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 TRIM59Q8IWR1 403 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 FIBCD1Q8N539 461 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 ZNF513Q8N8E2 541 aaPredicted RBP8.36□□□□□ -1.07
CHD1-204ENST00000505982 BTN2A2Q8WVV5 523 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 NINJ1Q92982 152 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 RCC1LQ96I51 464 aaKnown RBP8.36□□□□□ -1.07
CHD1-204ENST00000505982 IER2Q9BTL4 223 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 PRDM14Q9GZV8 571 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 ZCCHC4Q9H5U6 513 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 NCOA5Q9HCD5 579 aaKnown RBP8.36□□□□□ -1.07
CHD1-204ENST00000505982 GFOD1Q9NXC2 390 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 EMC9Q9Y3B6 208 aa8.36□□□□□ -1.07
CHD1-204ENST00000505982 PLD2O14939 933 aa8.35□□□□□ -1.07
CHD1-204ENST00000505982 RAPGEF3O95398 923 aa8.35□□□□□ -1.07
CHD1-204ENST00000505982 FGFR1P11362 822 aa8.35□□□□□ -1.07
CHD1-204ENST00000505982 GRIA2P42262 883 aa8.35□□□□□ -1.07
CHD1-204ENST00000505982 KCNJ6P48051 423 aa8.35□□□□□ -1.07
CHD1-204ENST00000505982 KISS1RQ969F8 398 aaPredicted RBP8.35□□□□□ -1.07
CHD1-204ENST00000505982 INTS4Q96HW7 963 aaKnown RBP8.35□□□□□ -1.07
CHD1-204ENST00000505982 ZDHHC15Q96MV8 337 aa8.35□□□□□ -1.07
CHD1-204ENST00000505982 CNOT6Q9ULM6 557 aaKnown RBP8.35□□□□□ -1.07
CHD1-204ENST00000505982 YBX2Q9Y2T7 364 aaKnown RBP8.35□□□□□ -1.07
CHD1-204ENST00000505982 FHOD1Q9Y613 1164 aa8.35□□□□□ -1.07
CHD1-204ENST00000505982 A0A087WZG4 1122 aa8.34□□□□□ -1.07
CHD1-204ENST00000505982 MYOCOSA0A1B0GUC4 107 aa8.34□□□□□ -1.07
CHD1-204ENST00000505982 MEIS1O00470 390 aa8.34□□□□□ -1.07
CHD1-204ENST00000505982 MYCLP1P12525 358 aaPredicted RBP8.34□□□□□ -1.07
CHD1-204ENST00000505982 BMP7P18075 431 aa8.34□□□□□ -1.07
CHD1-204ENST00000505982 SNX17Q15036 470 aa8.34□□□□□ -1.07
CHD1-204ENST00000505982 ARHGEF39Q8N4T4 335 aa8.34□□□□□ -1.07
CHD1-204ENST00000505982 DTWD2Q8NBA8 298 aa8.34□□□□□ -1.07
CHD1-204ENST00000505982 SYTL5Q8TDW5 730 aaPredicted RBP8.34□□□□□ -1.07
CHD1-204ENST00000505982 MRGPRX3Q96LB0 322 aa8.34□□□□□ -1.07
CHD1-204ENST00000505982 ZNF552Q9H707 407 aaPredicted RBP8.34□□□□□ -1.07
CHD1-204ENST00000505982 DIS3Q9Y2L1 958 aaKnown RBP8.34□□□□□ -1.07
CHD1-204ENST00000505982 SF3B6Q9Y3B4 125 aaKnown RBP8.34□□□□□ -1.07
CHD1-204ENST00000505982 TEX51A0A1B0GUA7 166 aa8.33□□□□□ -1.08
CHD1-204ENST00000505982 PDE6BP35913 854 aa8.33□□□□□ -1.08
CHD1-204ENST00000505982 CHRNEQ04844 493 aa8.33□□□□□ -1.08
CHD1-204ENST00000505982 FNDC3BQ53EP0 1204 aaKnown RBP8.33□□□□□ -1.08
CHD1-204ENST00000505982 TIGD5Q53EQ6 642 aa8.33□□□□□ -1.08
CHD1-204ENST00000505982 ZNF385BQ569K4 471 aa8.33□□□□□ -1.08
CHD1-204ENST00000505982 GTF2IRD2BQ6EKJ0 949 aa8.33□□□□□ -1.08
CHD1-204ENST00000505982 TMC3Q7Z5M5 1100 aa8.33□□□□□ -1.08
CHD1-204ENST00000505982 GTF2IRD2Q86UP8 949 aa8.33□□□□□ -1.08
CHD1-204ENST00000505982 PCDHA11Q9Y5I1 949 aa8.33□□□□□ -1.08
CHD1-204ENST00000505982 RFPL3O75679 317 aa8.32□□□□□ -1.08
CHD1-204ENST00000505982 SNRPB2P08579 225 aaKnown RBP8.32□□□□□ -1.08
CHD1-204ENST00000505982 AMPD2Q01433 879 aa8.32□□□□□ -1.08
CHD1-204ENST00000505982 DUSP4Q13115 394 aa8.32□□□□□ -1.08
CHD1-204ENST00000505982 CLEC16AQ2KHT3 1053 aa8.32□□□□□ -1.08
CHD1-204ENST00000505982 TM4SF20Q53R12 229 aa8.32□□□□□ -1.08
CHD1-204ENST00000505982 CT47A1Q5JQC4 288 aaPredicted RBP8.32□□□□□ -1.08
CHD1-204ENST00000505982 TCERG1LQ5VWI1 586 aa8.32□□□□□ -1.08
CHD1-204ENST00000505982 KCTD13Q8WZ19 329 aa8.32□□□□□ -1.08
CHD1-204ENST00000505982 OSBP2Q969R2 916 aa8.32□□□□□ -1.08
CHD1-204ENST00000505982 MRPL4Q9BYD3 311 aaKnown RBP8.32□□□□□ -1.08
CHD1-204ENST00000505982 PRR13Q9NZ81 148 aa8.32□□□□□ -1.08
CHD1-204ENST00000505982 SFMBT1Q9UHJ3 866 aa8.32□□□□□ -1.08
CHD1-204ENST00000505982 RFXAPO00287 272 aa8.31□□□□□ -1.08
CHD1-204ENST00000505982 RAB11FIP3O75154 756 aa8.31□□□□□ -1.08
CHD1-204ENST00000505982 AMPD3Q01432 767 aa8.31□□□□□ -1.08
CHD1-204ENST00000505982 NMIQ13287 307 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms