RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CYP3A7-CYP3A51PA0A087WV96 503 aa19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 PSMA7O14818 248 aa19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 PLA2G6O60733 806 aa19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 CYP3A7P24462 503 aa19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 POLD1P28340 1107 aa19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 TECP42680 631 aa19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 KRT79Q5XKE5 535 aa19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 C17orf53Q8N3J3 647 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 GIMAP8Q8ND71 665 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 MYRIPQ8NFW9 859 aa19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 DHTKD1Q96HY7 919 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 CDK5RAP3Q96JB5 506 aa19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 ZNF277Q9NRM2 450 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 GINM1Q9NU53 330 aa19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 DDX25Q9UHL0 483 aaKnown RBP19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 ITIH6Q6UXX5 1313 aa19.42■□□□□ 0.7
TRAPPC11-204ENST00000505676 LRRC10BA6NIK2 292 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 KLHL10Q6JEL2 608 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 FBXO11Q86XK2 927 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 ADSSL1Q8N142 457 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 MBOAT7Q96N66 472 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 TMX1Q9H3N1 280 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 SAMSN1Q9NSI8 373 aaKnown RBP19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 LIMA1Q9UHB6 759 aaKnown RBP19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 CTNND2Q9UQB3 1225 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 BICDL2A1A5D9 508 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 FAM196BA6NMK8 535 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 DYNC1I1O14576 645 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 TBX3O15119 743 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 RAD17O75943 681 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 GDF11O95390 407 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 SV2BQ7L1I2 683 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 SLFN12Q8IYM2 578 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 CCAR2Q8N163 923 aaKnown RBP19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 FBXO41Q8TF61 875 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 NELFBQ8WX92 580 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 TRIM9Q9C026 710 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 TMX2Q9Y320 296 aa19.41■□□□□ 0.7
TRAPPC11-204ENST00000505676 PVALEFA0A1B0GWK0 134 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 RPS12P25398 132 aaKnown RBP19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 CASP1P29466 404 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 CDC25AP30304 524 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 GTF2F1P35269 517 aaKnown RBP eCLIP19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 TXKP42681 527 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 TNIP1Q15025 636 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 KMT5BQ4FZB7 885 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 DEFB132Q7Z7B7 95 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 ZBED3Q96IU2 234 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 NT5C3AQ9H0P0 336 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 EXOC1Q9NV70 894 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 INTS13Q9NVM9 706 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 PP2D1A8MPX8 630 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 KLRC4O43908 158 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 MAP3K10Q02779 954 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 TRIM14Q14142 442 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 ARID5BQ14865 1188 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 DALRD3Q5D0E6 543 aaKnown RBP19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 STAMQ92783 540 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 ANO3Q9BYT9 981 aa19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 ADD3Q9UEY8 706 aaKnown RBP19.4■□□□□ 0.7
TRAPPC11-204ENST00000505676 CNTNAP1P78357 1384 aa19.39■□□□□ 0.7
TRAPPC11-204ENST00000505676 TCP10L2B9ZVM9 353 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 TDP2O95551 362 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 HYIQ5T013 277 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 KCTD17Q8N5Z5 321 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 JDP2Q8WYK2 163 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 MMTAG2Q9BU76 263 aaKnown RBP19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 TAOK3Q9H2K8 898 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 THAP9Q9H5L6 903 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 ARHGAP6O43182 974 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 SLC37A4O43826 429 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 PTPN14Q15678 1187 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 UBE2SQ16763 222 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 CIAPIN1Q6FI81 312 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 FOXR2Q6PJQ5 311 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 APTXQ7Z2E3 356 aaKnown RBP19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 FAM160B2Q86V87 743 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 CHURC1Q8WUH1 139 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 CCDC51Q96ER9 411 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 NAA15Q9BXJ9 866 aaKnown RBP19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 ZBTB21Q9ULJ3 1066 aa19.39■□□□□ 0.69
TRAPPC11-204ENST00000505676 UQCRHLA0A096LP55 91 aa19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 PIK3CDO00329 1044 aa19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 RAD21O60216 631 aa19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 MARCH6O60337 910 aa19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 STX10O60499 249 aa19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 UQCRHP07919 91 aa19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 TPM1P09493 284 aa19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 TNNT1P13805 278 aa19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 EEF1GP26641 437 aaKnown RBP19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 PRCPP42785 496 aa19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 STAT2P52630 851 aa19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 IKQ13123 557 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 TNFAIP1Q13829 316 aa19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 TMEM119Q4V9L6 283 aa19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 NYAP1Q6ZVC0 841 aa19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 MTFR1LQ9H019 292 aa19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.38■□□□□ 0.69
TRAPPC11-204ENST00000505676 GOLGA6L9A6NEM1 432 aa19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 TMEM232C9JQI7 657 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms