RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 CYP39A1Q9NYL5 469 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 FBXO40Q9UH90 709 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 PRR12Q9ULL5 1215 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 ISY1Q9ULR0 285 aaKnown RBP6.95□□□□□ -1.3
GYPB-205ENST00000505583 SYNPO2Q9UMS6 1093 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 STX8Q9UNK0 236 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 MTMR7Q9Y216 660 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 YBX2Q9Y2T7 364 aaKnown RBP6.95□□□□□ -1.3
GYPB-205ENST00000505583 CTDP1Q9Y5B0 961 aaPredicted RBP6.95□□□□□ -1.3
GYPB-205ENST00000505583 MROH7Q68CQ1 1323 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 TTC41PQ6P2S7 1318 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 PTPRSQ13332 1948 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 NFIBO00712 420 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 DYNC1LI2O43237 492 aaPredicted RBP6.94□□□□□ -1.3
GYPB-205ENST00000505583 B4GALT4O60513 344 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 MYOGP15173 224 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 NOVP48745 357 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 CCL23P55773 120 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 PDE4BQ07343 736 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 IKQ13123 557 aaPredicted RBP6.94□□□□□ -1.3
GYPB-205ENST00000505583 PPIGQ13427 754 aaKnown RBP eCLIP6.94□□□□□ -1.3
GYPB-205ENST00000505583 ITGA7Q13683 1181 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 FSCN1Q16658 493 aaKnown RBP6.94□□□□□ -1.3
GYPB-205ENST00000505583 RCSD1Q6JBY9 416 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 NOL8Q76FK4 1167 aaKnown RBP6.94□□□□□ -1.3
GYPB-205ENST00000505583 FAM160B2Q86V87 743 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 CHURC1Q8WUH1 139 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 PPM1EQ8WY54 764 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 NOC4LQ9BVI4 516 aaKnown RBP6.94□□□□□ -1.3
GYPB-205ENST00000505583 NACAP1Q9BZK3 213 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 WNT8AQ9H1J5 351 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 SPC25Q9HBM1 224 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 ZNF287Q9HBT7 754 aa6.94□□□□□ -1.3
GYPB-205ENST00000505583 CHD9Q3L8U1 2897 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 ASB14A6NK59 587 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 TSPY2A6NKD2 308 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 TTLL13PA6NNM8 815 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 RANBP6O60518 1105 aaKnown RBP6.93□□□□□ -1.3
GYPB-205ENST00000505583 PLA2G6O60733 806 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 FGRP09769 529 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 FDX1P10109 184 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 MX1P20591 662 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 RABGGTBP53611 331 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 BAATQ14032 418 aaPredicted RBP6.93□□□□□ -1.3
GYPB-205ENST00000505583 CCDC85BQ15834 202 aaPredicted RBP6.93□□□□□ -1.3
GYPB-205ENST00000505583 NSMFQ6X4W1 530 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 OTOP2Q7RTS6 562 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 TMEM199Q8N511 208 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 MORC4Q8TE76 937 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 HERVK_113Q902F9 699 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 SCLYQ96I15 445 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 FAM227BQ96M60 508 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 RANBP17Q9H2T7 1088 aaKnown RBP6.93□□□□□ -1.3
GYPB-205ENST00000505583 NKX2-4Q9H2Z4 354 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 HIPK3Q9H422 1215 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 IL23AQ9NPF7 189 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 PLSCR2Q9NRY7 297 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 BMP2KQ9NSY1 1161 aaPredicted RBP6.93□□□□□ -1.3
GYPB-205ENST00000505583 ANAPC4Q9UJX5 808 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 CCPG1Q9ULG6 757 aa6.93□□□□□ -1.3
GYPB-205ENST00000505583 FRMPD2Q68DX3 1309 aaPredicted RBP6.93□□□□□ -1.3
GYPB-205ENST00000505583 TANC1Q9C0D5 1861 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 TCF20Q9UGU0 1960 aaKnown RBP6.92□□□□□ -1.3
GYPB-205ENST00000505583 SCN10AQ9Y5Y9 1956 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 A0A0D9SFI3 127 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 ERC2O15083 957 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 TLR3O15455 904 aaKnown RBP6.92□□□□□ -1.3
GYPB-205ENST00000505583 FGBP02675 491 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 ICAM1P05362 532 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 SLC3A2P08195 630 aaKnown RBP6.92□□□□□ -1.3
GYPB-205ENST00000505583 CYP2C9P11712 490 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 TIE1P35590 1138 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 CCDC96Q2M329 555 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 TKFCQ3LXA3 575 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 IQSEC1Q6DN90 963 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 PSRC1Q6PGN9 363 aaPredicted RBP6.92□□□□□ -1.3
GYPB-205ENST00000505583 BTNL9Q6UXG8 535 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 SLC30A10Q6XR72 485 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 KIAA1211Q6ZU35 1233 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 ZNF589Q86UQ0 364 aaPredicted RBP6.92□□□□□ -1.3
GYPB-205ENST00000505583 CLEC4DQ8WXI8 215 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 TMEM47Q9BQJ4 181 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 AP5M1Q9H0R1 490 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 ALDH8A1Q9H2A2 487 aaPredicted RBP6.92□□□□□ -1.3
GYPB-205ENST00000505583 CPVLQ9H3G5 476 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 GPCPD1Q9NPB8 672 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 TRMT13Q9NUP7 481 aaKnown RBP6.92□□□□□ -1.3
GYPB-205ENST00000505583 REV3LO60673 3130 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 MUC3AQ02505 3323 aa6.92□□□□□ -1.3
GYPB-205ENST00000505583 MYO9BQ13459 2157 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 RBM47A0AV96 593 aaKnown RBP6.91□□□□□ -1.3
GYPB-205ENST00000505583 RFXAPO00287 272 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 ORC4O43929 436 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 CABYRO75952 493 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 ARHGEF15O94989 841 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 FGAP02671 866 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 PDHBP11177 359 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 IGFBP4P22692 258 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 ALDH5A1P51649 535 aaPredicted RBP6.91□□□□□ -1.3
GYPB-205ENST00000505583 PDE1AP54750 535 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms