RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 CALML4Q96GE6 196 aa21.88■■□□□ 1.09
SDHA-206ENST00000505555 DUSP9Q99956 384 aaKnown RBP21.88■■□□□ 1.09
SDHA-206ENST00000505555 CARD6Q9BX69 1037 aa21.88■■□□□ 1.09
SDHA-206ENST00000505555 ABHD10Q9NUJ1 306 aa21.88■■□□□ 1.09
SDHA-206ENST00000505555 POTEMA6NI47 508 aa21.88■■□□□ 1.09
SDHA-206ENST00000505555 ERVK-24P63145 666 aa21.88■■□□□ 1.09
SDHA-206ENST00000505555 KIFC2Q96AC6 838 aa21.88■■□□□ 1.09
SDHA-206ENST00000505555 MAGEF1Q9HAY2 307 aa21.88■■□□□ 1.09
SDHA-206ENST00000505555 RIC8AQ9NPQ8 531 aa21.88■■□□□ 1.09
SDHA-206ENST00000505555 DDTLA6NHG4 134 aaPredicted RBP21.87■■□□□ 1.09
SDHA-206ENST00000505555 ZSCAN20P17040 1043 aaPredicted RBP21.87■■□□□ 1.09
SDHA-206ENST00000505555 ANKRD40Q6AI12 368 aa21.87■■□□□ 1.09
SDHA-206ENST00000505555 PNMA5Q96PV4 448 aa21.87■■□□□ 1.09
SDHA-206ENST00000505555 UIMC1Q96RL1 719 aa21.87■■□□□ 1.09
SDHA-206ENST00000505555 NUDT12Q9BQG2 462 aa21.87■■□□□ 1.09
SDHA-206ENST00000505555 MCM6Q14566 821 aa21.87■■□□□ 1.09
SDHA-206ENST00000505555 PODNQ7Z5L7 613 aa21.87■■□□□ 1.09
SDHA-206ENST00000505555 C2CD5Q86YS7 1000 aa21.87■■□□□ 1.09
SDHA-206ENST00000505555 CSGALNACT2Q8N6G5 542 aa21.87■■□□□ 1.09
SDHA-206ENST00000505555 MB21D1Q8N884 522 aa21.87■■□□□ 1.09
SDHA-206ENST00000505555 ACRBPQ8NEB7 543 aa21.87■■□□□ 1.09
SDHA-206ENST00000505555 CCDC51Q96ER9 411 aa21.87■■□□□ 1.09
SDHA-206ENST00000505555 ZDHHC15Q96MV8 337 aa21.87■■□□□ 1.09
SDHA-206ENST00000505555 THAP9Q9H5L6 903 aa21.87■■□□□ 1.09
SDHA-206ENST00000505555 BLOC1S4Q9NUP1 217 aa21.87■■□□□ 1.09
SDHA-206ENST00000505555 QSER1Q2KHR3 1735 aa21.86■■□□□ 1.09
SDHA-206ENST00000505555 PLSCR1O15162 318 aa21.86■■□□□ 1.09
SDHA-206ENST00000505555 KRT9P35527 623 aa21.86■■□□□ 1.09
SDHA-206ENST00000505555 MNS1Q8NEH6 495 aa21.86■■□□□ 1.09
SDHA-206ENST00000505555 DHTKD1Q96HY7 919 aaPredicted RBP21.86■■□□□ 1.09
SDHA-206ENST00000505555 COL11A2P13942 1736 aaPredicted RBP21.86■■□□□ 1.09
SDHA-206ENST00000505555 MYO3BQ8WXR4 1341 aa21.86■■□□□ 1.09
SDHA-206ENST00000505555 ZBTB5O15062 677 aa21.86■■□□□ 1.09
SDHA-206ENST00000505555 ABL1P00519 1130 aa21.86■■□□□ 1.09
SDHA-206ENST00000505555 FXR2P51116 673 aaKnown RBP eCLIP21.86■■□□□ 1.091e-6■■□□□ 12.1
SDHA-206ENST00000505555 ORC2Q13416 577 aaPredicted RBP21.86■■□□□ 1.09
SDHA-206ENST00000505555 ZSCAN29Q8IWY8 852 aaPredicted RBP21.86■■□□□ 1.09
SDHA-206ENST00000505555 P2RX5Q93086 422 aa21.86■■□□□ 1.09
SDHA-206ENST00000505555 SLC39A2Q9NP94 309 aa21.86■■□□□ 1.09
SDHA-206ENST00000505555 PRDM4Q9UKN5 801 aa21.86■■□□□ 1.09
SDHA-206ENST00000505555 MYH8P13535 1937 aa21.85■■□□□ 1.09
SDHA-206ENST00000505555 MYMKA6NI61 221 aa21.85■■□□□ 1.09
SDHA-206ENST00000505555 LGALS16A8MUM7 142 aa21.85■■□□□ 1.09
SDHA-206ENST00000505555 EEF1GP26641 437 aaKnown RBP21.85■■□□□ 1.09
SDHA-206ENST00000505555 MAP3K9P80192 1104 aa21.85■■□□□ 1.09
SDHA-206ENST00000505555 AMPD3Q01432 767 aa21.85■■□□□ 1.09
SDHA-206ENST00000505555 ARHGAP29Q52LW3 1261 aa21.85■■□□□ 1.09
SDHA-206ENST00000505555 GPATCH4Q5T3I0 446 aaKnown RBP21.85■■□□□ 1.09
SDHA-206ENST00000505555 SV2BQ7L1I2 683 aa21.85■■□□□ 1.09
SDHA-206ENST00000505555 DYMQ7RTS9 669 aa21.85■■□□□ 1.09
SDHA-206ENST00000505555 ZNF507Q8TCN5 953 aa21.85■■□□□ 1.09
SDHA-206ENST00000505555 CCDC47Q96A33 483 aaKnown RBP21.85■■□□□ 1.09
SDHA-206ENST00000505555 PRDM10Q9NQV6 1147 aa21.85■■□□□ 1.09
SDHA-206ENST00000505555 MAGEC2Q9UBF1 373 aaPredicted RBP21.85■■□□□ 1.09
SDHA-206ENST00000505555 FAM198AQ9UFP1 575 aa21.85■■□□□ 1.09
SDHA-206ENST00000505555 NRXN2Q9P2S2 1712 aa21.85■■□□□ 1.09
SDHA-206ENST00000505555 TTC26A0AVF1 554 aa21.84■■□□□ 1.09
SDHA-206ENST00000505555 B4DLN1 442 aa21.84■■□□□ 1.09
SDHA-206ENST00000505555 EEF2P13639 858 aaKnown RBP21.84■■□□□ 1.09
SDHA-206ENST00000505555 FECHP22830 423 aa21.84■■□□□ 1.09
SDHA-206ENST00000505555 CLK2P49760 499 aaKnown RBP21.84■■□□□ 1.09
SDHA-206ENST00000505555 TMEM266Q2M3C6 531 aa21.84■■□□□ 1.09
SDHA-206ENST00000505555 SH3BP5LQ7L8J4 393 aa21.84■■□□□ 1.09
SDHA-206ENST00000505555 KIAA0895Q8NCT3 520 aa21.84■■□□□ 1.09
SDHA-206ENST00000505555 CUL5Q93034 780 aa21.84■■□□□ 1.09
SDHA-206ENST00000505555 PSTPIP2Q9H939 334 aa21.84■■□□□ 1.09
SDHA-206ENST00000505555 OGFRQ9NZT2 677 aa21.84■■□□□ 1.09
SDHA-206ENST00000505555 CCNE1P24864 410 aa21.84■■□□□ 1.09
SDHA-206ENST00000505555 TMTC1Q8IUR5 882 aa21.84■■□□□ 1.09
SDHA-206ENST00000505555 CDK5RAP3Q96JB5 506 aa21.84■■□□□ 1.09
SDHA-206ENST00000505555 CHP1Q99653 195 aa21.84■■□□□ 1.09
SDHA-206ENST00000505555 EHD4Q9H223 541 aa21.84■■□□□ 1.09
SDHA-206ENST00000505555 NKRFO15226 690 aaKnown RBP eCLIP21.83■■□□□ 1.09
SDHA-206ENST00000505555 ECE2O60344 883 aa21.83■■□□□ 1.09
SDHA-206ENST00000505555 CERKLQ49MI3 558 aaPredicted RBP21.83■■□□□ 1.09
SDHA-206ENST00000505555 DACT2Q5SW24 774 aa21.83■■□□□ 1.09
SDHA-206ENST00000505555 KCNK18Q7Z418 384 aa21.83■■□□□ 1.09
SDHA-206ENST00000505555 UBXN4Q92575 508 aa21.83■■□□□ 1.09
SDHA-206ENST00000505555 TUBGCP2Q9BSJ2 902 aa21.83■■□□□ 1.09
SDHA-206ENST00000505555 USP17L15C9J2P7 530 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 USP17L13C9JLJ4 530 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 USP17L11C9JVI0 530 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 USP17L18D6R9N7 530 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 USP17L22D6RA61 530 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 USP17L17D6RBQ6 530 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 USP17L19D6RCP7 530 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 USP17L20D6RJB6 530 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 TADA3O75528 432 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 CHRNA5P30532 468 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 MRPL12P52815 198 aaKnown RBP21.83■■□□□ 1.08
SDHA-206ENST00000505555 USP17L24Q0WX57 530 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 SEMA3FQ13275 785 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 TRIM14Q14142 442 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 PPP1R18Q6NYC8 613 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 USP17L6PQ6QN14 398 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 CYP26C1Q6V0L0 522 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 SNX29Q8TEQ0 813 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 CCDC17Q96LX7 622 aa21.83■■□□□ 1.08
SDHA-206ENST00000505555 DDX25Q9UHL0 483 aaKnown RBP21.83■■□□□ 1.08
SDHA-206ENST00000505555 DDX41Q9UJV9 622 aaKnown RBP21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms