RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 OSBPL3Q9H4L5 887 aa14.36□□□□□ -0.11
SNHG4-202ENST00000505522 ADD3Q9UEY8 706 aaKnown RBP14.36□□□□□ -0.11
SNHG4-202ENST00000505522 Q9Y3F1 56 aa14.36□□□□□ -0.11
SNHG4-202ENST00000505522 PRUNE2Q8WUY3 3088 aa14.35□□□□□ -0.11
SNHG4-202ENST00000505522 DNAJB2P25686 324 aa14.35□□□□□ -0.11
SNHG4-202ENST00000505522 CALML3P27482 149 aa14.35□□□□□ -0.11
SNHG4-202ENST00000505522 CYP2C18P33260 490 aa14.35□□□□□ -0.11
SNHG4-202ENST00000505522 MFAP1P55081 439 aaKnown RBP14.35□□□□□ -0.11
SNHG4-202ENST00000505522 PSMC6P62333 389 aa14.35□□□□□ -0.11
SNHG4-202ENST00000505522 DUSP28Q4G0W2 176 aa14.35□□□□□ -0.11
SNHG4-202ENST00000505522 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
SNHG4-202ENST00000505522 TMEM199Q8N511 208 aa14.35□□□□□ -0.11
SNHG4-202ENST00000505522 MAFAQ8NHW3 353 aaPredicted RBP14.35□□□□□ -0.11
SNHG4-202ENST00000505522 CPVLQ9H3G5 476 aa14.35□□□□□ -0.11
SNHG4-202ENST00000505522 RNF41Q9H4P4 317 aaPredicted RBP14.35□□□□□ -0.11
SNHG4-202ENST00000505522 UMODL1Q5DID0 1318 aa14.35□□□□□ -0.11
SNHG4-202ENST00000505522 LAMA4Q16363 1823 aa14.34□□□□□ -0.11
SNHG4-202ENST00000505522 TMEM265A0A087WTH1 108 aa14.34□□□□□ -0.11
SNHG4-202ENST00000505522 ZNF213O14771 459 aa14.34□□□□□ -0.11
SNHG4-202ENST00000505522 ZEB2O60315 1214 aa14.34□□□□□ -0.11
SNHG4-202ENST00000505522 GOLGA8HP0CJ92 632 aa14.34□□□□□ -0.11
SNHG4-202ENST00000505522 RASIP1Q5U651 963 aa14.34□□□□□ -0.11
SNHG4-202ENST00000505522 RNF207Q6ZRF8 634 aa14.34□□□□□ -0.11
SNHG4-202ENST00000505522 ZNF365Q70YC5 407 aa14.34□□□□□ -0.11
SNHG4-202ENST00000505522 ESR2Q92731 530 aa14.34□□□□□ -0.11
SNHG4-202ENST00000505522 WDR11Q9BZH6 1224 aa14.34□□□□□ -0.11
SNHG4-202ENST00000505522 TRPV6Q9H1D0 765 aa14.34□□□□□ -0.11
SNHG4-202ENST00000505522 LOC102724159A0A0B4J2E5 919 aa14.33□□□□□ -0.12
SNHG4-202ENST00000505522 RBM47A0AV96 593 aaKnown RBP14.33□□□□□ -0.12
SNHG4-202ENST00000505522 GRXCR1A8MXD5 290 aa14.33□□□□□ -0.12
SNHG4-202ENST00000505522 B4GALT4O60513 344 aa14.33□□□□□ -0.12
SNHG4-202ENST00000505522 KDM4AO75164 1064 aa14.33□□□□□ -0.12
SNHG4-202ENST00000505522 PBX2P40425 430 aa14.33□□□□□ -0.12
SNHG4-202ENST00000505522 RPS6P62753 249 aaKnown RBP14.33□□□□□ -0.12
SNHG4-202ENST00000505522 GRIN2CQ14957 1233 aa14.33□□□□□ -0.12
SNHG4-202ENST00000505522 PWP2Q15269 919 aaKnown RBP14.33□□□□□ -0.12
SNHG4-202ENST00000505522 DGKHQ86XP1 1220 aa14.33□□□□□ -0.12
SNHG4-202ENST00000505522 COL25A1Q9BXS0 654 aaPredicted RBP14.33□□□□□ -0.12
SNHG4-202ENST00000505522 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
SNHG4-202ENST00000505522 HIPK3Q9H422 1215 aa14.33□□□□□ -0.12
SNHG4-202ENST00000505522 IL23AQ9NPF7 189 aa14.33□□□□□ -0.12
SNHG4-202ENST00000505522 DIAPH3Q9NSV4 1193 aa14.33□□□□□ -0.12
SNHG4-202ENST00000505522 WDR19Q8NEZ3 1342 aa14.33□□□□□ -0.12
SNHG4-202ENST00000505522 B4E1Z4 1266 aa14.32□□□□□ -0.12
SNHG4-202ENST00000505522 FOSL2P15408 326 aa14.32□□□□□ -0.12
SNHG4-202ENST00000505522 PDE4DQ08499 809 aa14.32□□□□□ -0.12
SNHG4-202ENST00000505522 USH1GQ495M9 461 aa14.32□□□□□ -0.12
SNHG4-202ENST00000505522 GPATCH4Q5T3I0 446 aaKnown RBP14.32□□□□□ -0.12
SNHG4-202ENST00000505522 PSRC1Q6PGN9 363 aaPredicted RBP14.32□□□□□ -0.12
SNHG4-202ENST00000505522 PNMA1Q8ND90 353 aa14.32□□□□□ -0.12
SNHG4-202ENST00000505522 NOC4LQ9BVI4 516 aaKnown RBP14.32□□□□□ -0.12
SNHG4-202ENST00000505522 PBX4Q9BYU1 374 aa14.32□□□□□ -0.12
SNHG4-202ENST00000505522 ZNF576Q9H609 170 aa14.32□□□□□ -0.12
SNHG4-202ENST00000505522 PNMA2Q9UL42 364 aa14.32□□□□□ -0.12
SNHG4-202ENST00000505522 MYL3P08590 195 aa14.31□□□□□ -0.12
SNHG4-202ENST00000505522 EDNRBP24530 442 aa14.31□□□□□ -0.12
SNHG4-202ENST00000505522 CCL23P55773 120 aa14.31□□□□□ -0.12
SNHG4-202ENST00000505522 PURAQ00577 322 aaKnown RBP14.31□□□□□ -0.12
SNHG4-202ENST00000505522 DNERQ8NFT8 737 aa14.31□□□□□ -0.12
SNHG4-202ENST00000505522 OR6J1Q8NGC5 347 aa14.31□□□□□ -0.12
SNHG4-202ENST00000505522 HERVK_113Q902F9 699 aa14.31□□□□□ -0.12
SNHG4-202ENST00000505522 ANKS1AQ92625 1134 aa14.31□□□□□ -0.12
SNHG4-202ENST00000505522 TIFAQ96CG3 184 aa14.31□□□□□ -0.12
SNHG4-202ENST00000505522 SEZ6LQ9BYH1 1024 aa14.31□□□□□ -0.12
SNHG4-202ENST00000505522 WNT8AQ9H1J5 351 aa14.31□□□□□ -0.12
SNHG4-202ENST00000505522 ALDH8A1Q9H2A2 487 aaPredicted RBP14.31□□□□□ -0.12
SNHG4-202ENST00000505522 CXXC1Q9P0U4 656 aaPredicted RBP14.31□□□□□ -0.12
SNHG4-202ENST00000505522 CHD9Q3L8U1 2897 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 HIP1O00291 1037 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 FGBP02675 491 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 CPT1AP50416 773 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 CDC37Q16543 378 aaPredicted RBP14.3□□□□□ -0.12
SNHG4-202ENST00000505522 CCDC178Q5BJE1 867 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 IQCA1Q86XH1 822 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 ENAHQ8N8S7 591 aaPredicted RBP14.3□□□□□ -0.12
SNHG4-202ENST00000505522 RGS22Q8NE09 1264 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 PPP1R13LQ8WUF5 828 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 TBC1D5Q92609 795 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 COPS5Q92905 334 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 VWCEQ96DN2 955 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 ZSCAN10Q96SZ4 725 aaPredicted RBP14.3□□□□□ -0.12
SNHG4-202ENST00000505522 DSCC1Q9BVC3 393 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 IL25Q9H293 177 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 KAT14Q9H8E8 782 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 TRMT13Q9NUP7 481 aaKnown RBP14.3□□□□□ -0.12
SNHG4-202ENST00000505522 POLR3EQ9NVU0 708 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 ZSWIM5Q9P217 1185 aa14.3□□□□□ -0.12
SNHG4-202ENST00000505522 PPP2R5BQ15173 497 aa14.29□□□□□ -0.12
SNHG4-202ENST00000505522 IMMTQ16891 758 aaKnown RBP14.29□□□□□ -0.12
SNHG4-202ENST00000505522 OTOP2Q7RTS6 562 aa14.29□□□□□ -0.12
SNHG4-202ENST00000505522 ADGRF4Q8IZF3 695 aa14.29□□□□□ -0.12
SNHG4-202ENST00000505522 SCFD2Q8WU76 684 aa14.29□□□□□ -0.12
SNHG4-202ENST00000505522 SCLYQ96I15 445 aa14.29□□□□□ -0.12
SNHG4-202ENST00000505522 MPHOSPH6Q99547 160 aaKnown RBP14.29□□□□□ -0.12
SNHG4-202ENST00000505522 MTG1Q9BT17 334 aaPredicted RBP14.29□□□□□ -0.12
SNHG4-202ENST00000505522 COL20A1Q9P218 1284 aa14.29□□□□□ -0.12
SNHG4-202ENST00000505522 VCANP13611 3396 aa14.29□□□□□ -0.12
SNHG4-202ENST00000505522 NKRFO15226 690 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNHG4-202ENST00000505522 TNKSO95271 1327 aa14.28□□□□□ -0.12
SNHG4-202ENST00000505522 ARIH2O95376 493 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms