RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ADAMTS2O95450 1211 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 CAVIN4Q5BKX8 364 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 FKBP15Q5T1M5 1219 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 CCDC42Q96M95 316 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 SH2D4AQ9H788 454 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 EFCC1Q9HA90 598 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 SH3GLB2Q9NR46 395 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 PLAGL2Q9UPG8 496 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 KIAA1551Q9HCM1 1747 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 GOLGA6CA6NDK9 693 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 STXBP3O00186 592 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 EXOC5O00471 708 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 GOLGA6DP0CG33 693 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 ATP6V1AP38606 617 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 CDK17Q00537 523 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 HEATR3Q7Z4Q2 680 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 FBXO33Q7Z6M2 555 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 CABP7Q86V35 215 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 C2CD5Q86YS7 1000 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 ANKRD18AQ8IVF6 992 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 MMTAG2Q9BU76 263 aaKnown RBP13.24□□□□□ -0.29
UBE3D-206ENST00000505226 FAM207AQ9NSI2 230 aaPredicted RBP13.24□□□□□ -0.29
UBE3D-206ENST00000505226 GOLGA6AQ9NYA3 693 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 SIK3Q9Y2K2 1263 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 JRKLQ9Y4A0 524 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 RREB1Q92766 1687 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 GRIN2DO15399 1336 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 GOLGA8HP0CJ92 632 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 KIF5BP33176 963 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 ATP2B2Q01814 1243 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 ANKRD13CQ8N6S4 541 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 FAM76AQ8TAV0 307 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 IPO4Q8TEX9 1081 aaKnown RBP13.24□□□□□ -0.29
UBE3D-206ENST00000505226 NOC3LQ8WTT2 800 aaKnown RBP13.24□□□□□ -0.29
UBE3D-206ENST00000505226 IFIH1Q9BYX4 1025 aaKnown RBP13.24□□□□□ -0.29
UBE3D-206ENST00000505226 BSDC1Q9NW68 430 aaPredicted RBP13.24□□□□□ -0.29
UBE3D-206ENST00000505226 A0A0G2JS52 829 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 A0A1W2PQJ5 194 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 MYL1P05976 194 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 EIF4A3P38919 411 aaKnown RBP13.24□□□□□ -0.29
UBE3D-206ENST00000505226 CCT5P48643 541 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 ASIC1P78348 528 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 DNAJC21Q5F1R6 531 aaKnown RBP13.24□□□□□ -0.29
UBE3D-206ENST00000505226 ZNF572Q7Z3I7 529 aaPredicted RBP13.24□□□□□ -0.29
UBE3D-206ENST00000505226 CERS3Q8IU89 383 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 ARL8AQ96BM9 186 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 OSBPL9Q96SU4 736 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 SLC39A2Q9NP94 309 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 MCM9Q9NXL9 1143 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 MYH1P12882 1939 aa13.24□□□□□ -0.29
UBE3D-206ENST00000505226 LAMB1P07942 1786 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 IPO7O95373 1038 aaKnown RBP13.23□□□□□ -0.29
UBE3D-206ENST00000505226 HNRNPH3P31942 346 aaKnown RBP13.23□□□□□ -0.29
UBE3D-206ENST00000505226 KIF11P52732 1056 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 TTC31Q49AM3 519 aaPredicted RBP13.23□□□□□ -0.29
UBE3D-206ENST00000505226 FIGNQ5HY92 759 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 HAUS3Q68CZ6 603 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 SLC51AQ86UW1 340 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 SH3GL2Q99962 352 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 C7orf25Q9BPX7 421 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 CRNKL1Q9BZJ0 848 aaKnown RBP13.23□□□□□ -0.29
UBE3D-206ENST00000505226 ATP8A2Q9NTI2 1148 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 GRM4Q14833 912 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 SBK1Q52WX2 424 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 TTMPQ5BVD1 217 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 SMIM5Q71RC9 77 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 TXNRD3Q86VQ6 643 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 FNBP4Q8N3X1 1017 aaPredicted RBP13.23□□□□□ -0.29
UBE3D-206ENST00000505226 CCDC155Q8N6L0 562 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 BARHL2Q9NY43 387 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 TECP42680 631 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 SPA17Q15506 151 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 SLC44A5Q8NCS7 719 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 TRIM58Q8NG06 486 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 ACSBG1Q96GR2 724 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 MS4A14Q96JA4 679 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 POLD4Q9HCU8 107 aa13.23□□□□□ -0.29
UBE3D-206ENST00000505226 LAMB2P55268 1798 aa13.22□□□□□ -0.29
UBE3D-206ENST00000505226 PDE4CQ08493 712 aa13.22□□□□□ -0.29
UBE3D-206ENST00000505226 DAGLBQ8NCG7 672 aa13.22□□□□□ -0.29
UBE3D-206ENST00000505226 GLIS3Q8NEA6 775 aa13.22□□□□□ -0.29
UBE3D-206ENST00000505226 MTMR8Q96EF0 704 aa13.22□□□□□ -0.29
UBE3D-206ENST00000505226 ARPP21Q9UBL0 812 aaPredicted RBP13.22□□□□□ -0.29
UBE3D-206ENST00000505226 BICDL2A1A5D9 508 aa13.22□□□□□ -0.29
UBE3D-206ENST00000505226 CCNT1O60563 726 aaKnown RBP13.22□□□□□ -0.29
UBE3D-206ENST00000505226 LCA5LO95447 670 aa13.22□□□□□ -0.29
UBE3D-206ENST00000505226 PRPHP41219 470 aa13.22□□□□□ -0.29
UBE3D-206ENST00000505226 LETM2Q2VYF4 491 aa13.22□□□□□ -0.29
UBE3D-206ENST00000505226 VWA3BQ502W6 1294 aa13.22□□□□□ -0.29
UBE3D-206ENST00000505226 AMOTL1Q8IY63 956 aa13.22□□□□□ -0.29
UBE3D-206ENST00000505226 TLR10Q9BXR5 811 aa13.22□□□□□ -0.29
UBE3D-206ENST00000505226 RBM12Q9NTZ6 932 aaKnown RBP13.22□□□□□ -0.29
UBE3D-206ENST00000505226 LRRC53A6NM62 1247 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 CENPPQ6IPU0 288 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 TMC4Q7Z404 712 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 DGKHQ86XP1 1220 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 PPM1EQ8WY54 764 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 BAP1Q92560 729 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 KAT2BQ92831 832 aa13.21□□□□□ -0.29
UBE3D-206ENST00000505226 NDST4Q9H3R1 872 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms