RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 LIMA1Q9UHB6 759 aaKnown RBP11.03□□□□□ -0.64
COL1A1-210ENST00000504289 PCDHA1Q9Y5I3 950 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 ITIH6Q6UXX5 1313 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 BICDL2A1A5D9 508 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 GOLGA6L9A6NEM1 432 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 PIK3CDO00329 1044 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 DYNC1I1O14576 645 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 PSMA7O14818 248 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 PPP1R11O60927 126 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-210ENST00000504289 NDUFB10O96000 172 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 POLD1P28340 1107 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 TNNI2P48788 182 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 PSMD2Q13200 908 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 TRIM14Q14142 442 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 CDC37Q16543 378 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-210ENST00000504289 HYIQ5T013 277 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 SYDE2Q5VT97 1194 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 KRT79Q5XKE5 535 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 TTBK2Q6IQ55 1244 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 KCTD1Q719H9 257 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 SV2BQ7L1I2 683 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 FBXO11Q86XK2 927 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 ADSSL1Q8N142 457 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 MYRIPQ8NFW9 859 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 CHURC1Q8WUH1 139 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 CCDC51Q96ER9 411 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 MED15Q96RN5 788 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 NAA15Q9BXJ9 866 aaKnown RBP11.02□□□□□ -0.65
COL1A1-210ENST00000504289 NT5C3AQ9H0P0 336 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 PNMA2Q9UL42 364 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 TMX2Q9Y320 296 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 R3HCC1Q9Y3T6 440 aaKnown RBP11.02□□□□□ -0.65
COL1A1-210ENST00000504289 LTBP3Q9NS15 1303 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 KDM3AQ9Y4C1 1321 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 ARFGEF1Q9Y6D6 1849 aa11.02□□□□□ -0.65
COL1A1-210ENST00000504289 ARHGAP6O43182 974 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 KLRC4O43908 158 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 STX10O60499 249 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 GH2P01242 217 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 CD44P16070 742 aaKnown RBP11.01□□□□□ -0.65
COL1A1-210ENST00000504289 PLCG1P19174 1290 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 EEF1GP26641 437 aaKnown RBP11.01□□□□□ -0.65
COL1A1-210ENST00000504289 CACNB3P54284 484 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 TNFAIP1Q13829 316 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 TPD52L1Q16890 204 aaPredicted RBP11.01□□□□□ -0.65
COL1A1-210ENST00000504289 DALRD3Q5D0E6 543 aaKnown RBP11.01□□□□□ -0.65
COL1A1-210ENST00000504289 ARMCX5Q6P1M9 558 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 RASGRP2Q7LDG7 609 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 APTXQ7Z2E3 356 aaKnown RBP11.01□□□□□ -0.65
COL1A1-210ENST00000504289 FAM160B2Q86V87 743 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 CCAR2Q8N163 923 aaKnown RBP11.01□□□□□ -0.65
COL1A1-210ENST00000504289 CRYGNQ8WXF5 182 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 IQCDQ96DY2 449 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 CDK5RAP3Q96JB5 506 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 PANX2Q96RD6 677 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 TRIM9Q9C026 710 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 THAP9Q9H5L6 903 aa11.01□□□□□ -0.65
COL1A1-210ENST00000504289 ADD3Q9UEY8 706 aaKnown RBP11.01□□□□□ -0.65
COL1A1-210ENST00000504289 DDX25Q9UHL0 483 aaKnown RBP11.01□□□□□ -0.65
COL1A1-210ENST00000504289 ZSCAN12O43309 604 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 ASNSP08243 561 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 CYP3A4P08684 503 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 TPM1P09493 284 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 CIITAP33076 1130 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 SLC16A2P36021 539 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 PBX1P40424 430 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 TECP42680 631 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 TXKP42681 527 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 ZNF280AP59817 542 aaPredicted RBP11□□□□□ -0.65
COL1A1-210ENST00000504289 Q4G0T1 1027 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 TMEM119Q4V9L6 283 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 CIAPIN1Q6FI81 312 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 NYAP1Q6ZVC0 841 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 POTEDQ86YR6 584 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 CLEC10AQ8IUN9 316 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 FAM114A1Q8IWE2 563 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 SAMD3Q8N6K7 520 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 NELFBQ8WX92 580 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 JDP2Q8WYK2 163 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 DPF2Q92785 391 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 FAM20AQ96MK3 541 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 MMTAG2Q9BU76 263 aaKnown RBP11□□□□□ -0.65
COL1A1-210ENST00000504289 MTFR1LQ9H019 292 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 DEFB129Q9H1M3 183 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 KCNMB3Q9NPA1 279 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 ZNF277Q9NRM2 450 aaPredicted RBP11□□□□□ -0.65
COL1A1-210ENST00000504289 SAMSN1Q9NSI8 373 aaKnown RBP11□□□□□ -0.65
COL1A1-210ENST00000504289 EXOC1Q9NV70 894 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 TMEM260Q9NX78 707 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 ZBTB21Q9ULJ3 1066 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 PCDHA12Q9UN75 941 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 RABGAP1Q9Y3P9 1069 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 PCDHAC2Q9Y5I4 1007 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11□□□□□ -0.65
COL1A1-210ENST00000504289 CD2APQ9Y5K6 639 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 CNTNAP1P78357 1384 aa11□□□□□ -0.65
COL1A1-210ENST00000504289 TMEM232C9JQI7 657 aa10.99□□□□□ -0.65
COL1A1-210ENST00000504289 MEIS2O14770 477 aa10.99□□□□□ -0.65
COL1A1-210ENST00000504289 EDIL3O43854 480 aa10.99□□□□□ -0.65
COL1A1-210ENST00000504289 RAD17O75943 681 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms