RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 GMIPQ9P107 970 aa4□□□□□ -1.77
HMGB3P17-201ENST00000504195 POLR3KQ9Y2Y1 108 aaPredicted RBP4□□□□□ -1.77
HMGB3P17-201ENST00000504195 DNAJA2O60884 412 aa3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 ZBTB7AO95365 584 aa3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 F13A1P00488 732 aa3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 RPL13P26373 211 aaKnown RBP3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 IL12RB1P42701 662 aa3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 NOP2P46087 812 aaKnown RBP3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 CACNB2Q08289 660 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 PWP1Q13610 501 aa3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 TAF1CQ15572 869 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 HS1BP3Q53T59 392 aa3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 MIIPQ5JXC2 388 aa3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 CWF19L1Q69YN2 538 aaKnown RBP3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 ERICH6Q7L0X2 663 aa3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 LINC00482Q8N8I6 264 aa3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 NUDT5Q9UKK9 219 aa3.99□□□□□ -1.77
HMGB3P17-201ENST00000504195 ZNF623O75123 536 aa3.98□□□□□ -1.77
HMGB3P17-201ENST00000504195 PRPF40AO75400 957 aaKnown RBP3.98□□□□□ -1.77
HMGB3P17-201ENST00000504195 CTSKP43235 329 aa3.98□□□□□ -1.77
HMGB3P17-201ENST00000504195 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
HMGB3P17-201ENST00000504195 NRN1LQ496H8 165 aa3.98□□□□□ -1.77
HMGB3P17-201ENST00000504195 C9orf131Q5VYM1 1079 aa3.98□□□□□ -1.77
HMGB3P17-201ENST00000504195 REC114Q7Z4M0 266 aa3.98□□□□□ -1.77
HMGB3P17-201ENST00000504195 USP48Q86UV5 1035 aa3.98□□□□□ -1.77
HMGB3P17-201ENST00000504195 PEX11GQ96HA9 241 aa3.98□□□□□ -1.77
HMGB3P17-201ENST00000504195 SRRTQ9BXP5 876 aaKnown RBP3.98□□□□□ -1.77
HMGB3P17-201ENST00000504195 GFOD1Q9NXC2 390 aa3.98□□□□□ -1.77
HMGB3P17-201ENST00000504195 FBXL21Q9UKT6 434 aa3.98□□□□□ -1.77
HMGB3P17-201ENST00000504195 ROBO2Q9HCK4 1378 aa3.98□□□□□ -1.77
HMGB3P17-201ENST00000504195 MEIS1O00470 390 aa3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 TBC1D8O95759 1140 aa3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 PF4P02776 101 aa3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 GSTM1P09488 218 aa3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 CYP2C8P10632 490 aa3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 TACR1P25103 407 aa3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 THBS2P35442 1172 aa3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 RTP2Q5QGT7 225 aa3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 RNF207Q6ZRF8 634 aa3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 RELL1Q8IUW5 271 aa3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 TXNDC5Q8NBS9 432 aaKnown RBP3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 NETO2Q8NC67 525 aa3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 NEU4Q8WWR8 484 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 DDX11Q96FC9 970 aa3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 DSCC1Q9BVC3 393 aa3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 MKRN2Q9H000 416 aaKnown RBP3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 BCAS3Q9H6U6 928 aa3.97□□□□□ -1.77
HMGB3P17-201ENST00000504195 C9orf118A6NHY6 69 aa3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 PATE3B3GLJ2 98 aa3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 SUPT5HO00267 1087 aaKnown RBP3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 FGF10O15520 208 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 B4GALT3O60512 393 aa3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 ATE1O95260 518 aa3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 P4HBP07237 508 aaKnown RBP3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 GLI4P10075 376 aa3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 L1CAMP32004 1257 aa3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 PTH1RQ03431 593 aa3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 AUHQ13825 339 aaKnown RBP3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 PRKD1Q15139 912 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 ARHGEF18Q6ZSZ5 1173 aa3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 SLC12A9Q9BXP2 914 aa3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 CNNM2Q9H8M5 875 aa3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 MINPP1Q9UNW1 487 aa3.96□□□□□ -1.78
HMGB3P17-201ENST00000504195 USP31Q70CQ4 1352 aa3.95□□□□□ -1.78
HMGB3P17-201ENST00000504195 ERBB2P04626 1255 aa3.95□□□□□ -1.78
HMGB3P17-201ENST00000504195 CWF19L2Q2TBE0 894 aaKnown RBP3.95□□□□□ -1.78
HMGB3P17-201ENST00000504195 LSM12Q3MHD2 195 aaKnown RBP3.95□□□□□ -1.78
HMGB3P17-201ENST00000504195 MEI1Q5TIA1 1274 aa3.95□□□□□ -1.78
HMGB3P17-201ENST00000504195 IGFL4Q6B9Z1 124 aa3.95□□□□□ -1.78
HMGB3P17-201ENST00000504195 CRTC3Q6UUV7 619 aa3.95□□□□□ -1.78
HMGB3P17-201ENST00000504195 ZNF503Q96F45 646 aa3.95□□□□□ -1.78
HMGB3P17-201ENST00000504195 RHOVQ96L33 236 aa3.95□□□□□ -1.78
HMGB3P17-201ENST00000504195 TMEM74Q96NL1 305 aa3.95□□□□□ -1.78
HMGB3P17-201ENST00000504195 RSRP1Q9BUV0 290 aa3.95□□□□□ -1.78
HMGB3P17-201ENST00000504195 NARSO43776 548 aaKnown RBP3.94□□□□□ -1.78
HMGB3P17-201ENST00000504195 CYP1A1P04798 512 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P17-201ENST00000504195 ZC3H6P61129 1189 aaKnown RBP3.94□□□□□ -1.78
HMGB3P17-201ENST00000504195 PPP2CBP62714 309 aa3.94□□□□□ -1.78
HMGB3P17-201ENST00000504195 PPP2CAP67775 309 aa3.94□□□□□ -1.78
HMGB3P17-201ENST00000504195 SNAP47Q5SQN1 464 aa3.94□□□□□ -1.78
HMGB3P17-201ENST00000504195 GLCCI1Q86VQ1 547 aa3.94□□□□□ -1.78
HMGB3P17-201ENST00000504195 TTLL6Q8N841 843 aa3.94□□□□□ -1.78
HMGB3P17-201ENST00000504195 KYQ8NBH2 561 aa3.94□□□□□ -1.78
HMGB3P17-201ENST00000504195 WWC2-AS2Q96NR7 200 aa3.94□□□□□ -1.78
HMGB3P17-201ENST00000504195 C11orf84Q9BUA3 381 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P17-201ENST00000504195 DDX3XO00571 662 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 ACRP10323 421 aa3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 ITGB6P18564 788 aa3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 EPHB4P54760 987 aa3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 LRRFIP1Q32MZ4 808 aaKnown RBP3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 SLFN13Q68D06 897 aa3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 OVOS1Q6IE37 1185 aa3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 FAM196AQ6ZSG2 479 aa3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 NLRC3Q7RTR2 1065 aa3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 C7orf61Q8IZ16 206 aa3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 GOLM1Q8NBJ4 401 aa3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 ZNF512BQ96KM6 892 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 DHRS1Q96LJ7 313 aa3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 PTCHD1Q96NR3 888 aa3.93□□□□□ -1.78
HMGB3P17-201ENST00000504195 GORASP1Q9BQQ3 440 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms