RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 RAG1P15918 1043 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 VCAM1P19320 739 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 ADORA2AP29274 412 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 BACE1P56817 501 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 FPGSQ05932 587 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 CTDSPL2Q05D32 466 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 POU4F2Q12837 409 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 PLS1Q14651 629 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 RAB3GAP1Q15042 981 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 LRRC41Q15345 812 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 SH3D19Q5HYK7 790 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 KRT40Q6A162 431 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 ERICH6Q7L0X2 663 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 ADGRA1Q86SQ6 560 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 ACER1Q8TDN7 264 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 TGFBRAP1Q8WUH2 860 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 EDC3Q96F86 508 aaKnown RBP4.48□□□□□ -1.69
USP46-205ENST00000504078 ASB2Q96Q27 587 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.48□□□□□ -1.69
USP46-205ENST00000504078 MRIQ9BWK5 157 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 CHMP4AQ9BY43 222 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 PBX4Q9BYU1 374 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 SNRKQ9NRH2 765 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 GNL3LQ9NVN8 582 aaKnown RBP4.48□□□□□ -1.69
USP46-205ENST00000504078 PALD1Q9ULE6 856 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 IVNS1ABPQ9Y6Y0 642 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 IL16Q14005 1332 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 REV3LO60673 3130 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 COL11A1P12107 1806 aaPredicted RBP4.47□□□□□ -1.69
USP46-205ENST00000504078 GPR75-ASB3A0A0A6YYF3 556 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 A0A1B0GUL7 405 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 A0A1W2PQ45 241 aaPredicted RBP4.47□□□□□ -1.69
USP46-205ENST00000504078 A0A1W2PQY0 241 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 MYADML2A6NDP7 307 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 USP17L10C9JJH3 530 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 ERVH48-1M5A8F1 160 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 MEN1O00255 615 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 RFXAPO00287 272 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 COBLO75128 1261 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 MYOGP15173 224 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 TAL1P17542 331 aaPredicted RBP4.47□□□□□ -1.69
USP46-205ENST00000504078 PTGS1P23219 599 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 RABGGTBP53611 331 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 TIMM10P62072 90 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 DYNLL1P63167 89 aaKnown RBP4.47□□□□□ -1.69
USP46-205ENST00000504078 TFCP2Q12800 502 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 GRB14Q14449 540 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 SNX17Q15036 470 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 SLCO4C1Q6ZQN7 724 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 DPP9Q86TI2 863 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 ZGPATQ8N5A5 531 aaKnown RBP4.47□□□□□ -1.69
USP46-205ENST00000504078 MIGA1Q8NAN2 632 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 LRRN4Q8WUT4 740 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 NSUN4Q96CB9 384 aaKnown RBP4.47□□□□□ -1.69
USP46-205ENST00000504078 XAGE2Q96GT9 111 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 TANGO6Q9C0B7 1094 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 USP44Q9H0E7 712 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 EPHX3Q9H6B9 360 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 RPAP3Q9H6T3 665 aaPredicted RBP4.47□□□□□ -1.69
USP46-205ENST00000504078 CERS4Q9HA82 394 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 CYLDQ9NQC7 956 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 XPNPEP3Q9NQH7 507 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 HMG20BQ9P0W2 317 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 CEP126Q9P2H0 1117 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 YBX2Q9Y2T7 364 aaKnown RBP4.47□□□□□ -1.69
USP46-205ENST00000504078 HCN4Q9Y3Q4 1203 aa4.47□□□□□ -1.69
USP46-205ENST00000504078 UMODL1Q5DID0 1318 aa4.46□□□□□ -1.69
USP46-205ENST00000504078 MYH1P12882 1939 aa4.46□□□□□ -1.69
USP46-205ENST00000504078 SLC15A5A6NIM6 579 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 SPATA31C2B4DYI2 1134 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 SEPT4O43236 478 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 MSCO60682 206 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 PGK2P07205 417 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 ASNSP08243 561 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 UBTFL1P0CB47 393 aaPredicted RBP4.46□□□□□ -1.7
USP46-205ENST00000504078 CSF2RAP15509 400 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 CAPN2P17655 700 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 ERCC3P19447 782 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 HOXA7P31268 230 aaPredicted RBP4.46□□□□□ -1.7
USP46-205ENST00000504078 MCAMP43121 646 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 DGKGP49619 791 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 CCNA1P78396 465 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 MRPS5P82675 430 aaKnown RBP4.46□□□□□ -1.7
USP46-205ENST00000504078 LBRQ14739 615 aaKnown RBP4.46□□□□□ -1.7
USP46-205ENST00000504078 NR6A1Q15406 480 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 PPP2R2DQ66LE6 453 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 NAA16Q6N069 864 aaPredicted RBP4.46□□□□□ -1.7
USP46-205ENST00000504078 USP17L2Q6R6M4 530 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 SPRED2Q7Z698 418 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 NCAPG2Q86XI2 1143 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 ATG4CQ96DT6 458 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 NEUROD6Q96NK8 337 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 MEIS3Q99687 375 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 NOL10Q9BSC4 688 aaKnown RBP4.46□□□□□ -1.7
USP46-205ENST00000504078 LRFN3Q9BTN0 628 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 WDR18Q9BV38 432 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 MOV10L1Q9BXT6 1211 aaKnown RBP4.46□□□□□ -1.7
USP46-205ENST00000504078 MRS2Q9HD23 443 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 TIMMDC1Q9NPL8 285 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms