RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 NLRC3Q7RTR2 1065 aa6.89□□□□□ -1.31
UBE3D-205ENST00000503942 REXO1Q8N1G1 1221 aaKnown RBP6.89□□□□□ -1.31
UBE3D-205ENST00000503942 DDX1Q92499 740 aaKnown RBP6.89□□□□□ -1.31
UBE3D-205ENST00000503942 RBM15Q96T37 977 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBE3D-205ENST00000503942 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBE3D-205ENST00000503942 SRRDQ9UH36 339 aa6.89□□□□□ -1.31
UBE3D-205ENST00000503942 PPT2Q9UMR5 302 aa6.89□□□□□ -1.31
UBE3D-205ENST00000503942 GSNP06396 782 aa6.88□□□□□ -1.31
UBE3D-205ENST00000503942 MCM4P33991 863 aa6.88□□□□□ -1.31
UBE3D-205ENST00000503942 GJA9P57773 515 aa6.88□□□□□ -1.31
UBE3D-205ENST00000503942 HLA-DQA1Q5Y7H0 255 aa6.88□□□□□ -1.31
UBE3D-205ENST00000503942 GK5Q6ZS86 529 aa6.88□□□□□ -1.31
UBE3D-205ENST00000503942 TMEM192Q8IY95 271 aa6.88□□□□□ -1.31
UBE3D-205ENST00000503942 CARFQ8N187 725 aa6.88□□□□□ -1.31
UBE3D-205ENST00000503942 NAT16Q8N8M0 369 aa6.88□□□□□ -1.31
UBE3D-205ENST00000503942 EHMT1Q9H9B1 1298 aa6.88□□□□□ -1.31
UBE3D-205ENST00000503942 PPP1R1BQ9UD71 204 aaPredicted RBP6.88□□□□□ -1.31
UBE3D-205ENST00000503942 ATP2B1P20020 1258 aa6.87□□□□□ -1.31
UBE3D-205ENST00000503942 PRR5P85299 388 aa6.87□□□□□ -1.31
UBE3D-205ENST00000503942 AUHQ13825 339 aaKnown RBP6.87□□□□□ -1.31
UBE3D-205ENST00000503942 CPZQ66K79 652 aa6.87□□□□□ -1.31
UBE3D-205ENST00000503942 BICRALQ6AI39 1079 aa6.87□□□□□ -1.31
UBE3D-205ENST00000503942 CCDC81Q6ZN84 652 aa6.87□□□□□ -1.31
UBE3D-205ENST00000503942 JAMLQ86YT9 394 aa6.87□□□□□ -1.31
UBE3D-205ENST00000503942 SLC16A11Q8NCK7 471 aa6.87□□□□□ -1.31
UBE3D-205ENST00000503942 SLC6A18Q96N87 628 aa6.87□□□□□ -1.31
UBE3D-205ENST00000503942 C1QTNF3Q9BXJ4 246 aa6.87□□□□□ -1.31
UBE3D-205ENST00000503942 SLC12A9Q9BXP2 914 aa6.87□□□□□ -1.31
UBE3D-205ENST00000503942 PDLIM7Q9NR12 457 aa6.87□□□□□ -1.31
UBE3D-205ENST00000503942 FBXL21Q9UKT6 434 aa6.87□□□□□ -1.31
UBE3D-205ENST00000503942 NCAM1P13591 858 aa6.86□□□□□ -1.31
UBE3D-205ENST00000503942 MC3RP41968 323 aa6.86□□□□□ -1.31
UBE3D-205ENST00000503942 ZNF165P49910 485 aa6.86□□□□□ -1.31
UBE3D-205ENST00000503942 CYP2R1Q6VVX0 501 aa6.86□□□□□ -1.31
UBE3D-205ENST00000503942 B3GNT8Q7Z7M8 397 aa6.86□□□□□ -1.31
UBE3D-205ENST00000503942 TTC9BQ8N6N2 239 aa6.86□□□□□ -1.31
UBE3D-205ENST00000503942 SHDQ96IW2 340 aa6.86□□□□□ -1.31
UBE3D-205ENST00000503942 SRRTQ9BXP5 876 aaKnown RBP6.86□□□□□ -1.31
UBE3D-205ENST00000503942 ZNRF3Q9ULT6 936 aa6.86□□□□□ -1.31
UBE3D-205ENST00000503942 A0A1W2PQJ5 194 aa6.85□□□□□ -1.31
UBE3D-205ENST00000503942 ASGR2P07307 311 aa6.85□□□□□ -1.31
UBE3D-205ENST00000503942 GSTM1P09488 218 aa6.85□□□□□ -1.31
UBE3D-205ENST00000503942 GTF2F1P35269 517 aaKnown RBP eCLIP6.85□□□□□ -1.31
UBE3D-205ENST00000503942 CORO7P57737 925 aa6.85□□□□□ -1.31
UBE3D-205ENST00000503942 UBXN4Q92575 508 aa6.85□□□□□ -1.31
UBE3D-205ENST00000503942 ANTXR1Q9H6X2 564 aa6.85□□□□□ -1.31
UBE3D-205ENST00000503942 ZNF408Q9H9D4 720 aa6.85□□□□□ -1.31
UBE3D-205ENST00000503942 STRIP2Q9ULQ0 834 aa6.85□□□□□ -1.31
UBE3D-205ENST00000503942 MRVI1Q9Y6F6 885 aa6.85□□□□□ -1.31
UBE3D-205ENST00000503942 F8W031 263 aaPredicted RBP6.84□□□□□ -1.31
UBE3D-205ENST00000503942 TNFRSF10CO14798 259 aa6.84□□□□□ -1.31
UBE3D-205ENST00000503942 ZNF20P17024 532 aa6.84□□□□□ -1.31
UBE3D-205ENST00000503942 ETFBP38117 255 aa6.84□□□□□ -1.31
UBE3D-205ENST00000503942 RBL2Q08999 1139 aa6.84□□□□□ -1.31
UBE3D-205ENST00000503942 ARMC5Q96C12 935 aa6.84□□□□□ -1.31
UBE3D-205ENST00000503942 SAMD11Q96NU1 681 aa6.84□□□□□ -1.31
UBE3D-205ENST00000503942 SORCS2Q96PQ0 1159 aa6.84□□□□□ -1.31
UBE3D-205ENST00000503942 DSCC1Q9BVC3 393 aa6.84□□□□□ -1.31
UBE3D-205ENST00000503942 MEIS3P2A8K0S8 358 aa6.83□□□□□ -1.32
UBE3D-205ENST00000503942 SHOXO15266 292 aa6.83□□□□□ -1.32
UBE3D-205ENST00000503942 FGF10O15520 208 aaPredicted RBP6.83□□□□□ -1.32
UBE3D-205ENST00000503942 FSHBP01225 129 aa6.83□□□□□ -1.32
UBE3D-205ENST00000503942 SSBP05455 408 aaKnown RBP eCLIP6.83□□□□□ -1.32
UBE3D-205ENST00000503942 NME1P15531 152 aaKnown RBP6.83□□□□□ -1.32
UBE3D-205ENST00000503942 GIPRP48546 466 aa6.83□□□□□ -1.32
UBE3D-205ENST00000503942 ZNF761Q86XN6 746 aaPredicted RBP6.83□□□□□ -1.32
UBE3D-205ENST00000503942 FAM169BQ8N8A8 192 aa6.83□□□□□ -1.32
UBE3D-205ENST00000503942 FERD3LQ96RJ6 166 aa6.83□□□□□ -1.32
UBE3D-205ENST00000503942 TACR1P25103 407 aa6.82□□□□□ -1.32
UBE3D-205ENST00000503942 CWF19L1Q69YN2 538 aaKnown RBP6.82□□□□□ -1.32
UBE3D-205ENST00000503942 RBBP8NLQ8NC74 664 aaPredicted RBP6.82□□□□□ -1.32
UBE3D-205ENST00000503942 CPLX3Q8WVH0 158 aa6.82□□□□□ -1.32
UBE3D-205ENST00000503942 ALG3Q92685 438 aa6.82□□□□□ -1.32
UBE3D-205ENST00000503942 C8orf49Q96NF6 230 aa6.82□□□□□ -1.32
UBE3D-205ENST00000503942 DNAJC2Q99543 621 aaKnown RBP6.82□□□□□ -1.32
UBE3D-205ENST00000503942 NTMQ9P121 344 aa6.82□□□□□ -1.32
UBE3D-205ENST00000503942 DBR1Q9UK59 544 aaKnown RBP6.82□□□□□ -1.32
UBE3D-205ENST00000503942 H0Y8X5 98 aa6.81□□□□□ -1.32
UBE3D-205ENST00000503942 STK10O94804 968 aaKnown RBP6.81□□□□□ -1.32
UBE3D-205ENST00000503942 IMPDH2P12268 514 aa6.81□□□□□ -1.32
UBE3D-205ENST00000503942 PMLP29590 882 aa6.81□□□□□ -1.32
UBE3D-205ENST00000503942 EIF6P56537 245 aaKnown RBP6.81□□□□□ -1.32
UBE3D-205ENST00000503942 LRRFIP1Q32MZ4 808 aaKnown RBP6.81□□□□□ -1.32
UBE3D-205ENST00000503942 FBXW10Q5XX13 1052 aa6.81□□□□□ -1.32
UBE3D-205ENST00000503942 C7orf61Q8IZ16 206 aa6.81□□□□□ -1.32
UBE3D-205ENST00000503942 ANAPC16Q96DE5 110 aa6.81□□□□□ -1.32
UBE3D-205ENST00000503942 SUCOQ9UBS9 1254 aaKnown RBP6.81□□□□□ -1.32
UBE3D-205ENST00000503942 OVOL3O00110 214 aa6.8□□□□□ -1.32
UBE3D-205ENST00000503942 PLATP00750 562 aa6.8□□□□□ -1.32
UBE3D-205ENST00000503942 GLI4P10075 376 aa6.8□□□□□ -1.32
UBE3D-205ENST00000503942 SARSP49591 514 aaKnown RBP6.8□□□□□ -1.32
UBE3D-205ENST00000503942 RUFY4Q6ZNE9 571 aa6.8□□□□□ -1.32
UBE3D-205ENST00000503942 NLGN2Q8NFZ4 835 aa6.8□□□□□ -1.32
UBE3D-205ENST00000503942 TSPAN17Q96FV3 270 aa6.8□□□□□ -1.32
UBE3D-205ENST00000503942 LOXL4Q96JB6 756 aa6.8□□□□□ -1.32
UBE3D-205ENST00000503942 SLC9A7Q96T83 725 aa6.8□□□□□ -1.32
UBE3D-205ENST00000503942 SPATA6Q9NWH7 488 aaPredicted RBP6.8□□□□□ -1.32
UBE3D-205ENST00000503942 SMAD7O15105 426 aaKnown RBP6.79□□□□□ -1.32
UBE3D-205ENST00000503942 KLF4O43474 513 aa6.79□□□□□ -1.32
UBE3D-205ENST00000503942 KRTAP1-1Q07627 177 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms