RNA–Protein interactions for RNA: ENST00000503495.5

DDR1-249, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-249ENST00000503495 CXXC1Q9P0U4 656 aaPredicted RBP17.72■□□□□ 0.43
DDR1-249ENST00000503495 MSRAQ9UJ68 235 aa17.72■□□□□ 0.43
DDR1-249ENST00000503495 MTMR7Q9Y216 660 aa17.72■□□□□ 0.43
DDR1-249ENST00000503495 ZMYM6O95789 1325 aa17.72■□□□□ 0.43
DDR1-249ENST00000503495 NFIBO00712 420 aa17.71■□□□□ 0.43
DDR1-249ENST00000503495 HSPD1P10809 573 aaKnown RBP17.71■□□□□ 0.43
DDR1-249ENST00000503495 CCL23P55773 120 aa17.71■□□□□ 0.43
DDR1-249ENST00000503495 PSMC6P62333 389 aa17.71■□□□□ 0.43
DDR1-249ENST00000503495 TJAP1Q5JTD0 557 aa17.71■□□□□ 0.43
DDR1-249ENST00000503495 RPUSD2Q8IZ73 545 aaKnown RBP17.71■□□□□ 0.43
DDR1-249ENST00000503495 WDR11Q9BZH6 1224 aa17.71■□□□□ 0.43
DDR1-249ENST00000503495 TOMM22Q9NS69 142 aa17.71■□□□□ 0.43
DDR1-249ENST00000503495 POLR3EQ9NVU0 708 aa17.71■□□□□ 0.43
DDR1-249ENST00000503495 SUPT20HL2P0C7V6 817 aa17.7■□□□□ 0.42
DDR1-249ENST00000503495 PDHBP11177 359 aa17.7■□□□□ 0.42
DDR1-249ENST00000503495 PCP11498 1178 aaKnown RBP17.7■□□□□ 0.42
DDR1-249ENST00000503495 OTOP2Q7RTS6 562 aa17.7■□□□□ 0.42
DDR1-249ENST00000503495 CLEC4DQ8WXI8 215 aa17.7■□□□□ 0.42
DDR1-249ENST00000503495 FAM227BQ96M60 508 aa17.7■□□□□ 0.42
DDR1-249ENST00000503495 WNT8AQ9H1J5 351 aa17.7■□□□□ 0.42
DDR1-249ENST00000503495 ALDH8A1Q9H2A2 487 aaPredicted RBP17.7■□□□□ 0.42
DDR1-249ENST00000503495 PRDM12Q9H4Q4 367 aa17.7■□□□□ 0.42
DDR1-249ENST00000503495 GPCPD1Q9NPB8 672 aa17.7■□□□□ 0.42
DDR1-249ENST00000503495 CHD9Q3L8U1 2897 aa17.69■□□□□ 0.42
DDR1-249ENST00000503495 A0A0D9SFI3 127 aa17.69■□□□□ 0.42
DDR1-249ENST00000503495 PTPDC1A2A3K4 754 aa17.69■□□□□ 0.42
DDR1-249ENST00000503495 SNHG28P0DPA3 235 aa17.69■□□□□ 0.42
DDR1-249ENST00000503495 CPT1AP50416 773 aa17.69■□□□□ 0.42
DDR1-249ENST00000503495 PURAQ00577 322 aaKnown RBP17.69■□□□□ 0.42
DDR1-249ENST00000503495 HDAC1Q13547 482 aaPredicted RBP17.69■□□□□ 0.42
DDR1-249ENST00000503495 RRP12Q5JTH9 1297 aaKnown RBP17.69■□□□□ 0.42
DDR1-249ENST00000503495 VWCEQ96DN2 955 aa17.69■□□□□ 0.42
DDR1-249ENST00000503495 SLC28A3Q9HAS3 691 aa17.69■□□□□ 0.42
DDR1-249ENST00000503495 FRMPD2Q68DX3 1309 aaPredicted RBP17.69■□□□□ 0.42
DDR1-249ENST00000503495 NKRFO15226 690 aaKnown RBP eCLIP17.68■□□□□ 0.42
DDR1-249ENST00000503495 EDNRBP24530 442 aa17.68■□□□□ 0.42
DDR1-249ENST00000503495 RRP1P56182 461 aaKnown RBP17.68■□□□□ 0.42
DDR1-249ENST00000503495 ZNF543Q08ER8 600 aa17.68■□□□□ 0.42
DDR1-249ENST00000503495 RNF207Q6ZRF8 634 aa17.68■□□□□ 0.42
DDR1-249ENST00000503495 DNERQ8NFT8 737 aa17.68■□□□□ 0.42
DDR1-249ENST00000503495 ATXN2LQ8WWM7 1075 aaKnown RBP17.68■□□□□ 0.42
DDR1-249ENST00000503495 GBF1Q92538 1859 aa17.68■□□□□ 0.42
DDR1-249ENST00000503495 MPHOSPH6Q99547 160 aaKnown RBP17.68■□□□□ 0.42
DDR1-249ENST00000503495 WDR19Q8NEZ3 1342 aa17.68■□□□□ 0.42
DDR1-249ENST00000503495 PFKMP08237 780 aa17.67■□□□□ 0.42
DDR1-249ENST00000503495 ADGRE1Q14246 886 aa17.67■□□□□ 0.42
DDR1-249ENST00000503495 SLC30A10Q6XR72 485 aa17.67■□□□□ 0.42
DDR1-249ENST00000503495 MFSD6Q6ZSS7 791 aa17.67■□□□□ 0.42
DDR1-249ENST00000503495 ZNF589Q86UQ0 364 aaPredicted RBP17.67■□□□□ 0.42
DDR1-249ENST00000503495 SCLYQ96I15 445 aa17.67■□□□□ 0.42
DDR1-249ENST00000503495 MTG1Q9BT17 334 aaPredicted RBP17.67■□□□□ 0.42
DDR1-249ENST00000503495 MAF1Q9H063 256 aa17.67■□□□□ 0.42
DDR1-249ENST00000503495 NKX2-4Q9H2Z4 354 aa17.67■□□□□ 0.42
DDR1-249ENST00000503495 GPHNQ9NQX3 736 aaPredicted RBP17.67■□□□□ 0.42
DDR1-249ENST00000503495 YBX2Q9Y2T7 364 aaKnown RBP17.67■□□□□ 0.42
DDR1-249ENST00000503495 SLC4A7Q9Y6M7 1214 aa17.67■□□□□ 0.42
DDR1-249ENST00000503495 MYO9BQ13459 2157 aa17.67■□□□□ 0.42
DDR1-249ENST00000503495 TNKSO95271 1327 aa17.67■□□□□ 0.42
DDR1-249ENST00000503495 A6NJR5 290 aa17.66■□□□□ 0.42
DDR1-249ENST00000503495 B4DLN1 442 aa17.66■□□□□ 0.42
DDR1-249ENST00000503495 KPNA6O60684 536 aa17.66■□□□□ 0.42
DDR1-249ENST00000503495 CALML3P27482 149 aa17.66■□□□□ 0.42
DDR1-249ENST00000503495 NT5C2P49902 561 aa17.66■□□□□ 0.42
DDR1-249ENST00000503495 MRPL12P52815 198 aaKnown RBP17.66■□□□□ 0.42
DDR1-249ENST00000503495 RPS6P62753 249 aaKnown RBP17.66■□□□□ 0.42
DDR1-249ENST00000503495 NMIQ13287 307 aaPredicted RBP17.66■□□□□ 0.42
DDR1-249ENST00000503495 BRDTQ58F21 947 aaPredicted RBP17.66■□□□□ 0.42
DDR1-249ENST00000503495 GPATCH4Q5T3I0 446 aaKnown RBP17.66■□□□□ 0.42
DDR1-249ENST00000503495 DGKHQ86XP1 1220 aa17.66■□□□□ 0.42
DDR1-249ENST00000503495 RGS22Q8NE09 1264 aa17.66■□□□□ 0.42
DDR1-249ENST00000503495 OR6J1Q8NGC5 347 aa17.66■□□□□ 0.42
DDR1-249ENST00000503495 TRMT13Q9NUP7 481 aaKnown RBP17.66■□□□□ 0.42
DDR1-249ENST00000503495 PCDHA11Q9Y5I1 949 aa17.66■□□□□ 0.42
DDR1-249ENST00000503495 MYL3P08590 195 aa17.65■□□□□ 0.42
DDR1-249ENST00000503495 CYP2C9P11712 490 aa17.65■□□□□ 0.42
DDR1-249ENST00000503495 HAND2P61296 217 aa17.65■□□□□ 0.42
DDR1-249ENST00000503495 PTPN11Q06124 597 aaPredicted RBP17.65■□□□□ 0.42
DDR1-249ENST00000503495 PDE4DQ08499 809 aa17.65■□□□□ 0.42
DDR1-249ENST00000503495 PPP2R5BQ15173 497 aa17.65■□□□□ 0.42
DDR1-249ENST00000503495 NFRKBQ6P4R8 1299 aa17.65■□□□□ 0.42
DDR1-249ENST00000503495 SCFD2Q8WU76 684 aa17.65■□□□□ 0.42
DDR1-249ENST00000503495 PPM1EQ8WY54 764 aa17.65■□□□□ 0.42
DDR1-249ENST00000503495 CRBNQ96SW2 442 aa17.65■□□□□ 0.42
DDR1-249ENST00000503495 RNF41Q9H4P4 317 aaPredicted RBP17.65■□□□□ 0.42
DDR1-249ENST00000503495 SCN10AQ9Y5Y9 1956 aa17.65■□□□□ 0.42
DDR1-249ENST00000503495 CCDC171Q6TFL3 1326 aa17.65■□□□□ 0.42
DDR1-249ENST00000503495 RAD50Q92878 1312 aa17.65■□□□□ 0.42
DDR1-249ENST00000503495 MFAP1P55081 439 aaKnown RBP17.64■□□□□ 0.41
DDR1-249ENST00000503495 NBPF20Q3BBV1 942 aa17.64■□□□□ 0.41
DDR1-249ENST00000503495 ESR2Q92731 530 aa17.64■□□□□ 0.41
DDR1-249ENST00000503495 ASB2Q96Q27 587 aa17.64■□□□□ 0.41
DDR1-249ENST00000503495 THEGQ9P2T0 379 aa17.64■□□□□ 0.41
DDR1-249ENST00000503495 TNFRSF10AO00220 468 aa17.63■□□□□ 0.41
DDR1-249ENST00000503495 PITPNM1O00562 1244 aa17.63■□□□□ 0.41
DDR1-249ENST00000503495 TXNP10599 105 aaKnown RBP17.63■□□□□ 0.41
DDR1-249ENST00000503495 ATP2A2P16615 1042 aaKnown RBP17.63■□□□□ 0.41
DDR1-249ENST00000503495 IGFBP4P22692 258 aa17.63■□□□□ 0.41
DDR1-249ENST00000503495 RFC2P35250 354 aa17.63■□□□□ 0.41
DDR1-249ENST00000503495 RABGGTBP53611 331 aa17.63■□□□□ 0.41
DDR1-249ENST00000503495 CHD7Q9P2D1 2997 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms