RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 FBXO2Q9UK22 296 aaPredicted RBP15.37■□□□□ 0.05
SGCA-203ENST00000502555 SRPRBQ9Y5M8 271 aaKnown RBP15.37■□□□□ 0.05
SGCA-203ENST00000502555 PTPRFP10586 1907 aa15.37■□□□□ 0.05
SGCA-203ENST00000502555 CETPP11597 493 aa15.36■□□□□ 0.05
SGCA-203ENST00000502555 TAL1P17542 331 aaPredicted RBP15.36■□□□□ 0.05
SGCA-203ENST00000502555 HSD17B4P51659 736 aa15.36■□□□□ 0.05
SGCA-203ENST00000502555 GTF2A2P52657 109 aa15.36■□□□□ 0.05
SGCA-203ENST00000502555 PTGDRQ13258 359 aa15.36■□□□□ 0.05
SGCA-203ENST00000502555 LETM2Q2VYF4 491 aa15.36■□□□□ 0.05
SGCA-203ENST00000502555 ARL6IP4Q66PJ3 421 aaKnown RBP15.36■□□□□ 0.05
SGCA-203ENST00000502555 CCDC73Q6ZRK6 1079 aa15.36■□□□□ 0.05
SGCA-203ENST00000502555 CLEC4DQ8WXI8 215 aa15.36■□□□□ 0.05
SGCA-203ENST00000502555 EHMT1Q9H9B1 1298 aa15.36■□□□□ 0.05
SGCA-203ENST00000502555 ZNF214Q9UL59 606 aaPredicted RBP15.36■□□□□ 0.05
SGCA-203ENST00000502555 PARP14Q460N5 1801 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 PASKQ96RG2 1323 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 CFBP00751 764 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 ALAS1P13196 640 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 OSBPP22059 807 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 CMA1P23946 247 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 SREBF1P36956 1147 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 PRPHP41219 470 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 USP11P51784 963 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 TMEM132BQ14DG7 1078 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 SNRNP48Q6IEG0 339 aaKnown RBP15.35■□□□□ 0.05
SGCA-203ENST00000502555 PPP4R3AQ6IN85 833 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 CAVIN1Q6NZI2 390 aaKnown RBP15.35■□□□□ 0.05
SGCA-203ENST00000502555 MOXD1Q6UVY6 613 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 CCAR1Q8IX12 1150 aaKnown RBP15.35■□□□□ 0.05
SGCA-203ENST00000502555 FSIP1Q8NA03 581 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 ASCC2Q9H1I8 757 aaPredicted RBP15.35■□□□□ 0.05
SGCA-203ENST00000502555 DDX19AQ9NUU7 478 aaKnown RBP15.35■□□□□ 0.05
SGCA-203ENST00000502555 SLC45A1Q9Y2W3 748 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 RLFQ13129 1914 aa15.35■□□□□ 0.05
SGCA-203ENST00000502555 FAM237AA0A1B0GTK4 181 aa15.34■□□□□ 0.05
SGCA-203ENST00000502555 KIF3CO14782 793 aa15.34■□□□□ 0.05
SGCA-203ENST00000502555 NEMFO60524 1076 aa15.34■□□□□ 0.05
SGCA-203ENST00000502555 CCNT1O60563 726 aaKnown RBP15.34■□□□□ 0.05
SGCA-203ENST00000502555 LIG1P18858 919 aa15.34■□□□□ 0.05
SGCA-203ENST00000502555 HUNKP57058 714 aa15.34■□□□□ 0.05
SGCA-203ENST00000502555 FAM160A1Q05DH4 1040 aa15.34■□□□□ 0.05
SGCA-203ENST00000502555 SPRYD7Q5W111 196 aa15.34■□□□□ 0.05
SGCA-203ENST00000502555 GPAT2Q6NUI2 795 aa15.34■□□□□ 0.05
SGCA-203ENST00000502555 C4orf32Q8N8J7 132 aa15.34■□□□□ 0.05
SGCA-203ENST00000502555 SMC1BQ8NDV3 1235 aa15.34■□□□□ 0.05
SGCA-203ENST00000502555 GTF3C2Q8WUA4 911 aaPredicted RBP15.34■□□□□ 0.05
SGCA-203ENST00000502555 CRYGNQ8WXF5 182 aa15.34■□□□□ 0.05
SGCA-203ENST00000502555 RNF146Q9NTX7 359 aa15.34■□□□□ 0.05
SGCA-203ENST00000502555 PNMA3Q9UL41 463 aa15.34■□□□□ 0.05
SGCA-203ENST00000502555 A0A0G2JMZ2 1700 aa15.33■□□□□ 0.05
SGCA-203ENST00000502555 CYP3A7-CYP3A51PA0A087WV96 503 aa15.33■□□□□ 0.04
SGCA-203ENST00000502555 NFIBO00712 420 aa15.33■□□□□ 0.04
SGCA-203ENST00000502555 CYP3A7P24462 503 aa15.33■□□□□ 0.04
SGCA-203ENST00000502555 HOXA13P31271 388 aaPredicted RBP15.33■□□□□ 0.04
SGCA-203ENST00000502555 STAT3P40763 770 aa15.33■□□□□ 0.04
SGCA-203ENST00000502555 HERVK_113P62684 666 aa15.33■□□□□ 0.04
SGCA-203ENST00000502555 ARHGAP4P98171 946 aa15.33■□□□□ 0.04
SGCA-203ENST00000502555 CCDC183Q5T5S1 534 aa15.33■□□□□ 0.04
SGCA-203ENST00000502555 RESP18Q5W5W9 173 aa15.33■□□□□ 0.04
SGCA-203ENST00000502555 MS4A4AQ96JQ5 239 aa15.33■□□□□ 0.04
SGCA-203ENST00000502555 TRERF1Q96PN7 1200 aa15.33■□□□□ 0.04
SGCA-203ENST00000502555 P2RX7Q99572 595 aaKnown RBP15.33■□□□□ 0.04
SGCA-203ENST00000502555 RABGAP1Q9Y3P9 1069 aa15.33■□□□□ 0.04
SGCA-203ENST00000502555 CCL15-CCL14A0A0B4J2E2 113 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 EDIL3O43854 480 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 CYP3A4P08684 503 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 OR52Z1P0C646 297 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 COPB2P35606 906 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 CCL15Q16663 113 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 TPRNQ4KMQ1 711 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 MUM1L1Q5H9M0 696 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 SHC4Q6S5L8 630 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 ANKRD23Q86SG2 305 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 CHST13Q8NET6 341 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 MBOAT7Q96N66 472 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 CLIC6Q96NY7 704 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 GOLPH3LQ9H4A5 285 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 ACAD9Q9H845 621 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 HOMER2Q9NSB8 354 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 DACT1Q9NYF0 836 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 FAM13BQ9NYF5 915 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 TMEM63CQ9P1W3 806 aa15.32■□□□□ 0.04
SGCA-203ENST00000502555 TRPM7Q96QT4 1865 aa15.31■□□□□ 0.04
SGCA-203ENST00000502555 TDP2O95551 362 aa15.31■□□□□ 0.04
SGCA-203ENST00000502555 PFKFB1P16118 471 aa15.31■□□□□ 0.04
SGCA-203ENST00000502555 CIITAP33076 1130 aa15.31■□□□□ 0.04
SGCA-203ENST00000502555 LONP1P36776 959 aaKnown RBP15.31■□□□□ 0.04
SGCA-203ENST00000502555 DTHD1Q6ZMT9 781 aa15.31■□□□□ 0.04
SGCA-203ENST00000502555 FCHSD1Q86WN1 690 aa15.31■□□□□ 0.04
SGCA-203ENST00000502555 RIOX2Q8IUF8 465 aa15.31■□□□□ 0.04
SGCA-203ENST00000502555 ENGASEQ8NFI3 743 aa15.31■□□□□ 0.04
SGCA-203ENST00000502555 SYTL5Q8TDW5 730 aaPredicted RBP15.31■□□□□ 0.04
SGCA-203ENST00000502555 TBC1D5Q92609 795 aa15.31■□□□□ 0.04
SGCA-203ENST00000502555 CSRNP2Q9H175 543 aa15.31■□□□□ 0.04
SGCA-203ENST00000502555 TMEM60Q9H2L4 133 aa15.31■□□□□ 0.04
SGCA-203ENST00000502555 FBXO40Q9UH90 709 aa15.31■□□□□ 0.04
SGCA-203ENST00000502555 DDX25Q9UHL0 483 aaKnown RBP15.31■□□□□ 0.04
SGCA-203ENST00000502555 HPSEQ9Y251 543 aa15.31■□□□□ 0.04
SGCA-203ENST00000502555 RIPK3Q9Y572 518 aa15.31■□□□□ 0.04
SGCA-203ENST00000502555 MRVI1Q9Y6F6 885 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms