RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 UHRF1Q96T88 793 aaPredicted RBP17.37■□□□□ 0.37
SEC61A1-207ENST00000498837 ALDH8A1Q9H2A2 487 aaPredicted RBP17.37■□□□□ 0.37
SEC61A1-207ENST00000498837 VTA1Q9NP79 307 aa17.37■□□□□ 0.37
SEC61A1-207ENST00000498837 CCPG1Q9ULG6 757 aa17.37■□□□□ 0.37
SEC61A1-207ENST00000498837 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.37■□□□□ 0.37
SEC61A1-207ENST00000498837 MYH7BA7E2Y1 1941 aa17.37■□□□□ 0.37
SEC61A1-207ENST00000498837 TSPY2A6NKD2 308 aa17.36■□□□□ 0.37
SEC61A1-207ENST00000498837 CYP2C9P11712 490 aa17.36■□□□□ 0.37
SEC61A1-207ENST00000498837 TTLL4Q14679 1199 aa17.36■□□□□ 0.37
SEC61A1-207ENST00000498837 LRRFIP1Q32MZ4 808 aaKnown RBP17.36■□□□□ 0.37
SEC61A1-207ENST00000498837 PPP2R2DQ66LE6 453 aa17.36■□□□□ 0.37
SEC61A1-207ENST00000498837 MICALL1Q8N3F8 863 aa17.36■□□□□ 0.37
SEC61A1-207ENST00000498837 PI4K2BQ8TCG2 481 aa17.36■□□□□ 0.37
SEC61A1-207ENST00000498837 TRMT13Q9NUP7 481 aaKnown RBP17.36■□□□□ 0.37
SEC61A1-207ENST00000498837 PCDHA11Q9Y5I1 949 aa17.36■□□□□ 0.37
SEC61A1-207ENST00000498837 XIRP2A4UGR9 3374 aa17.36■□□□□ 0.37
SEC61A1-207ENST00000498837 BRWD1Q9NSI6 2320 aa17.36■□□□□ 0.37
SEC61A1-207ENST00000498837 KIAA1217Q5T5P2 1943 aa17.35■□□□□ 0.37
SEC61A1-207ENST00000498837 BAATQ14032 418 aaPredicted RBP17.35■□□□□ 0.37
SEC61A1-207ENST00000498837 DUSP28Q4G0W2 176 aa17.35■□□□□ 0.37
SEC61A1-207ENST00000498837 TTBK2Q6IQ55 1244 aa17.35■□□□□ 0.37
SEC61A1-207ENST00000498837 DEFB128Q7Z7B8 93 aa17.35■□□□□ 0.37
SEC61A1-207ENST00000498837 OTUD7AQ8TE49 926 aaPredicted RBP17.35■□□□□ 0.37
SEC61A1-207ENST00000498837 PPP1R13LQ8WUF5 828 aa17.35■□□□□ 0.37
SEC61A1-207ENST00000498837 NECAB3Q96P71 396 aaPredicted RBP17.35■□□□□ 0.37
SEC61A1-207ENST00000498837 FSD1Q9BTV5 496 aa17.35■□□□□ 0.37
SEC61A1-207ENST00000498837 RFXAPO00287 272 aa17.34■□□□□ 0.37
SEC61A1-207ENST00000498837 ICAM1P05362 532 aa17.34■□□□□ 0.37
SEC61A1-207ENST00000498837 ATP2A2P16615 1042 aaKnown RBP17.34■□□□□ 0.37
SEC61A1-207ENST00000498837 SLC16A2P36021 539 aa17.34■□□□□ 0.37
SEC61A1-207ENST00000498837 ALDH5A1P51649 535 aaPredicted RBP17.34■□□□□ 0.37
SEC61A1-207ENST00000498837 TFF2Q03403 129 aa17.34■□□□□ 0.37
SEC61A1-207ENST00000498837 PPP4R3BQ5MIZ7 849 aa17.34■□□□□ 0.37
SEC61A1-207ENST00000498837 TTC41PQ6P2S7 1318 aa17.34■□□□□ 0.37
SEC61A1-207ENST00000498837 IL27Q8NEV9 243 aa17.34■□□□□ 0.37
SEC61A1-207ENST00000498837 WDR11Q9BZH6 1224 aa17.34■□□□□ 0.37
SEC61A1-207ENST00000498837 TNKSO95271 1327 aa17.33■□□□□ 0.36
SEC61A1-207ENST00000498837 NFIBO00712 420 aa17.33■□□□□ 0.36
SEC61A1-207ENST00000498837 RANBP6O60518 1105 aaKnown RBP17.33■□□□□ 0.36
SEC61A1-207ENST00000498837 MYL3P08590 195 aa17.33■□□□□ 0.36
SEC61A1-207ENST00000498837 PURAQ00577 322 aaKnown RBP17.33■□□□□ 0.36
SEC61A1-207ENST00000498837 CCDC96Q2M329 555 aa17.33■□□□□ 0.36
SEC61A1-207ENST00000498837 DIEXFQ68CQ4 756 aaKnown RBP17.33■□□□□ 0.36
SEC61A1-207ENST00000498837 RANBP17Q9H2T7 1088 aaKnown RBP17.33■□□□□ 0.36
SEC61A1-207ENST00000498837 CERS4Q9HA82 394 aa17.33■□□□□ 0.36
SEC61A1-207ENST00000498837 POLR3EQ9NVU0 708 aa17.33■□□□□ 0.36
SEC61A1-207ENST00000498837 ERC2O15083 957 aa17.32■□□□□ 0.36
SEC61A1-207ENST00000498837 SUPT20HL2P0C7V6 817 aa17.32■□□□□ 0.36
SEC61A1-207ENST00000498837 BMP1P13497 986 aa17.32■□□□□ 0.36
SEC61A1-207ENST00000498837 NOVP48745 357 aa17.32■□□□□ 0.36
SEC61A1-207ENST00000498837 VPS53Q5VIR6 699 aa17.32■□□□□ 0.36
SEC61A1-207ENST00000498837 DCAF4Q8WV16 495 aa17.32■□□□□ 0.36
SEC61A1-207ENST00000498837 TSPYL2Q9H2G4 693 aaPredicted RBP17.32■□□□□ 0.36
SEC61A1-207ENST00000498837 ADD3Q9UEY8 706 aaKnown RBP17.32■□□□□ 0.36
SEC61A1-207ENST00000498837 RBM47A0AV96 593 aaKnown RBP17.31■□□□□ 0.36
SEC61A1-207ENST00000498837 PTPDC1A2A3K4 754 aa17.31■□□□□ 0.36
SEC61A1-207ENST00000498837 CA3P07451 260 aa17.31■□□□□ 0.36
SEC61A1-207ENST00000498837 PFKMP08237 780 aa17.31■□□□□ 0.36
SEC61A1-207ENST00000498837 KCNQ1P51787 676 aa17.31■□□□□ 0.36
SEC61A1-207ENST00000498837 NBPF20Q3BBV1 942 aa17.31■□□□□ 0.36
SEC61A1-207ENST00000498837 FAM47CQ5HY64 1035 aa17.31■□□□□ 0.36
SEC61A1-207ENST00000498837 TMEM67Q5HYA8 995 aa17.31■□□□□ 0.36
SEC61A1-207ENST00000498837 SYDE2Q5VT97 1194 aa17.31■□□□□ 0.36
SEC61A1-207ENST00000498837 BTNL9Q6UXG8 535 aa17.31■□□□□ 0.36
SEC61A1-207ENST00000498837 OR6J1Q8NGC5 347 aa17.31■□□□□ 0.36
SEC61A1-207ENST00000498837 GPCPD1Q9NPB8 672 aa17.31■□□□□ 0.36
SEC61A1-207ENST00000498837 MTCH2Q9Y6C9 303 aa17.31■□□□□ 0.36
SEC61A1-207ENST00000498837 COL4A4P53420 1690 aaPredicted RBP17.31■□□□□ 0.36
SEC61A1-207ENST00000498837 FRMPD2Q68DX3 1309 aaPredicted RBP17.3■□□□□ 0.36
SEC61A1-207ENST00000498837 EPOPA6NHQ4 379 aa17.3■□□□□ 0.36
SEC61A1-207ENST00000498837 CALML3P27482 149 aa17.3■□□□□ 0.36
SEC61A1-207ENST00000498837 CPT1AP50416 773 aa17.3■□□□□ 0.36
SEC61A1-207ENST00000498837 SKIV2LQ15477 1246 aaKnown RBP17.3■□□□□ 0.36
SEC61A1-207ENST00000498837 KRT40Q6A162 431 aa17.3■□□□□ 0.36
SEC61A1-207ENST00000498837 SLC30A10Q6XR72 485 aa17.3■□□□□ 0.36
SEC61A1-207ENST00000498837 CLEC4DQ8WXI8 215 aa17.3■□□□□ 0.36
SEC61A1-207ENST00000498837 COPS5Q92905 334 aa17.3■□□□□ 0.36
SEC61A1-207ENST00000498837 MTG1Q9BT17 334 aaPredicted RBP17.3■□□□□ 0.36
SEC61A1-207ENST00000498837 GPHNQ9NQX3 736 aaPredicted RBP17.3■□□□□ 0.36
SEC61A1-207ENST00000498837 ANAPC4Q9UJX5 808 aa17.3■□□□□ 0.36
SEC61A1-207ENST00000498837 ORC4O43929 436 aa17.29■□□□□ 0.36
SEC61A1-207ENST00000498837 ARHGEF15O94989 841 aa17.29■□□□□ 0.36
SEC61A1-207ENST00000498837 POU3F3P20264 500 aaPredicted RBP17.29■□□□□ 0.36
SEC61A1-207ENST00000498837 TMEM47Q9BQJ4 181 aa17.29■□□□□ 0.36
SEC61A1-207ENST00000498837 LOC102724159A0A0B4J2E5 919 aa17.28■□□□□ 0.36
SEC61A1-207ENST00000498837 FGRP09769 529 aa17.28■□□□□ 0.36
SEC61A1-207ENST00000498837 ACTN1P12814 892 aa17.28■□□□□ 0.36
SEC61A1-207ENST00000498837 PWP2Q15269 919 aaKnown RBP17.28■□□□□ 0.36
SEC61A1-207ENST00000498837 RNF207Q6ZRF8 634 aa17.28■□□□□ 0.36
SEC61A1-207ENST00000498837 TOMM22Q9NS69 142 aa17.28■□□□□ 0.36
SEC61A1-207ENST00000498837 PCDHB15Q9Y5E8 787 aa17.28■□□□□ 0.36
SEC61A1-207ENST00000498837 A6NJR5 290 aa17.27■□□□□ 0.36
SEC61A1-207ENST00000498837 GTPBP6O43824 516 aaPredicted RBP17.27■□□□□ 0.36
SEC61A1-207ENST00000498837 IQCF3P0C7M6 154 aa17.27■□□□□ 0.36
SEC61A1-207ENST00000498837 TOP1P11387 765 aaKnown RBP17.27■□□□□ 0.36
SEC61A1-207ENST00000498837 MX1P20591 662 aa17.27■□□□□ 0.36
SEC61A1-207ENST00000498837 RPS6P62753 249 aaKnown RBP17.27■□□□□ 0.36
SEC61A1-207ENST00000498837 TAP1Q03518 808 aa17.27■□□□□ 0.36
SEC61A1-207ENST00000498837 PDE4DQ08499 809 aa17.27■□□□□ 0.36
SEC61A1-207ENST00000498837 PPP2R5BQ15173 497 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms