RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 RNF207Q6ZRF8 634 aa12.96□□□□□ -0.33
LSAMP-206ENST00000498645 TMEM199Q8N511 208 aa12.96□□□□□ -0.33
LSAMP-206ENST00000498645 TTC14Q96N46 770 aa12.96□□□□□ -0.33
LSAMP-206ENST00000498645 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.96□□□□□ -0.33
LSAMP-206ENST00000498645 CPVLQ9H3G5 476 aa12.96□□□□□ -0.33
LSAMP-206ENST00000498645 KDM4AO75164 1064 aa12.95□□□□□ -0.34
LSAMP-206ENST00000498645 CABYRO75952 493 aa12.95□□□□□ -0.34
LSAMP-206ENST00000498645 FOSL2P15408 326 aa12.95□□□□□ -0.34
LSAMP-206ENST00000498645 DNAJB2P25686 324 aa12.95□□□□□ -0.34
LSAMP-206ENST00000498645 CYP2C18P33260 490 aa12.95□□□□□ -0.34
LSAMP-206ENST00000498645 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.95□□□□□ -0.34
LSAMP-206ENST00000498645 CLEC4DQ8WXI8 215 aa12.95□□□□□ -0.34
LSAMP-206ENST00000498645 UBA5Q9GZZ9 404 aa12.95□□□□□ -0.34
LSAMP-206ENST00000498645 CDH23Q9H251 3354 aa12.95□□□□□ -0.34
LSAMP-206ENST00000498645 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.94□□□□□ -0.34
LSAMP-206ENST00000498645 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.94□□□□□ -0.34
LSAMP-206ENST00000498645 B4E1Z4 1266 aa12.94□□□□□ -0.34
LSAMP-206ENST00000498645 DHX16O60231 1041 aaKnown RBP12.94□□□□□ -0.34
LSAMP-206ENST00000498645 MYL3P08590 195 aa12.94□□□□□ -0.34
LSAMP-206ENST00000498645 RPS6P62753 249 aaKnown RBP12.94□□□□□ -0.34
LSAMP-206ENST00000498645 NKX3-2P78367 333 aa12.94□□□□□ -0.34
LSAMP-206ENST00000498645 PDE4DQ08499 809 aa12.94□□□□□ -0.34
LSAMP-206ENST00000498645 IQCA1Q86XH1 822 aa12.94□□□□□ -0.34
LSAMP-206ENST00000498645 PNMA1Q8ND90 353 aa12.94□□□□□ -0.34
LSAMP-206ENST00000498645 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
LSAMP-206ENST00000498645 MAFAQ8NHW3 353 aaPredicted RBP12.94□□□□□ -0.34
LSAMP-206ENST00000498645 MORC4Q8TE76 937 aa12.94□□□□□ -0.34
LSAMP-206ENST00000498645 MPHOSPH6Q99547 160 aaKnown RBP12.94□□□□□ -0.34
LSAMP-206ENST00000498645 WDR11Q9BZH6 1224 aa12.94□□□□□ -0.34
LSAMP-206ENST00000498645 TRPV6Q9H1D0 765 aa12.94□□□□□ -0.34
LSAMP-206ENST00000498645 HIPK3Q9H422 1215 aa12.94□□□□□ -0.34
LSAMP-206ENST00000498645 OSBPL3Q9H4L5 887 aa12.94□□□□□ -0.34
LSAMP-206ENST00000498645 KAT14Q9H8E8 782 aa12.94□□□□□ -0.34
LSAMP-206ENST00000498645 PNMA2Q9UL42 364 aa12.94□□□□□ -0.34
LSAMP-206ENST00000498645 GBF1Q92538 1859 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 GRIN2DO15399 1336 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 UMODL1Q5DID0 1318 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 GRXCR1A8MXD5 290 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 HIP1O00291 1037 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 CD4P01730 458 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 SNHG28P0DPA3 235 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 CCL23P55773 120 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 CDC37Q16543 378 aaPredicted RBP12.93□□□□□ -0.34
LSAMP-206ENST00000498645 IMMTQ16891 758 aaKnown RBP12.93□□□□□ -0.34
LSAMP-206ENST00000498645 DUSP28Q4G0W2 176 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 TMEM240Q5SV17 173 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 GPATCH4Q5T3I0 446 aaKnown RBP12.93□□□□□ -0.34
LSAMP-206ENST00000498645 PSRC1Q6PGN9 363 aaPredicted RBP12.93□□□□□ -0.34
LSAMP-206ENST00000498645 ZNF365Q70YC5 407 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 C16orf59Q7L2K0 433 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 DGKHQ86XP1 1220 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 Q9Y3F1 56 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 MYO9BQ13459 2157 aa12.93□□□□□ -0.34
LSAMP-206ENST00000498645 WDR19Q8NEZ3 1342 aa12.92□□□□□ -0.34
LSAMP-206ENST00000498645 B4GALT4O60513 344 aa12.92□□□□□ -0.34
LSAMP-206ENST00000498645 CPT1AP50416 773 aa12.92□□□□□ -0.34
LSAMP-206ENST00000498645 PPP2R5BQ15173 497 aa12.92□□□□□ -0.34
LSAMP-206ENST00000498645 CCDC178Q5BJE1 867 aa12.92□□□□□ -0.34
LSAMP-206ENST00000498645 SLC43A3Q8NBI5 491 aa12.92□□□□□ -0.34
LSAMP-206ENST00000498645 PPP1R13LQ8WUF5 828 aa12.92□□□□□ -0.34
LSAMP-206ENST00000498645 TIFAQ96CG3 184 aa12.92□□□□□ -0.34
LSAMP-206ENST00000498645 ZSCAN10Q96SZ4 725 aaPredicted RBP12.92□□□□□ -0.34
LSAMP-206ENST00000498645 GPHNQ9NQX3 736 aaPredicted RBP12.92□□□□□ -0.34
LSAMP-206ENST00000498645 TNKSO95271 1327 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 RAD50Q92878 1312 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 TMEM265A0A087WTH1 108 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 PBX2P40425 430 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 CHMP4BP1P59074 171 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 GRIN2CQ14957 1233 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 BRDTQ58F21 947 aaPredicted RBP12.91□□□□□ -0.34
LSAMP-206ENST00000498645 FAM47CQ5HY64 1035 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 ADGRF4Q8IZF3 695 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 ENAHQ8N8S7 591 aaPredicted RBP12.91□□□□□ -0.34
LSAMP-206ENST00000498645 COPS5Q92905 334 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 UBAC1Q9BSL1 405 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 DSCC1Q9BVC3 393 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 NOC4LQ9BVI4 516 aaKnown RBP12.91□□□□□ -0.34
LSAMP-206ENST00000498645 PBX4Q9BYU1 374 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 ZNF576Q9H609 170 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 VAT1LQ9HCJ6 419 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 IL23AQ9NPF7 189 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 TRMT13Q9NUP7 481 aaKnown RBP12.91□□□□□ -0.34
LSAMP-206ENST00000498645 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 ZSWIM5Q9P217 1185 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 CTNNA3Q9UI47 895 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 CHD9Q3L8U1 2897 aa12.91□□□□□ -0.34
LSAMP-206ENST00000498645 KIAA1217Q5T5P2 1943 aa12.9□□□□□ -0.34
LSAMP-206ENST00000498645 SCN5AQ14524 2016 aa12.9□□□□□ -0.34
LSAMP-206ENST00000498645 LOC102724159A0A0B4J2E5 919 aa12.9□□□□□ -0.34
LSAMP-206ENST00000498645 B4DLN1 442 aa12.9□□□□□ -0.34
LSAMP-206ENST00000498645 FGBP02675 491 aa12.9□□□□□ -0.34
LSAMP-206ENST00000498645 PARP1P09874 1014 aaKnown RBP12.9□□□□□ -0.34
LSAMP-206ENST00000498645 TXNP10599 105 aaKnown RBP12.9□□□□□ -0.34
LSAMP-206ENST00000498645 CYP2C9P11712 490 aa12.9□□□□□ -0.34
LSAMP-206ENST00000498645 MRPL12P52815 198 aaKnown RBP12.9□□□□□ -0.34
LSAMP-206ENST00000498645 PURAQ00577 322 aaKnown RBP12.9□□□□□ -0.34
LSAMP-206ENST00000498645 PWP2Q15269 919 aaKnown RBP12.9□□□□□ -0.34
LSAMP-206ENST00000498645 ASPRV1Q53RT3 343 aa12.9□□□□□ -0.34
LSAMP-206ENST00000498645 OTOP2Q7RTS6 562 aa12.9□□□□□ -0.34
LSAMP-206ENST00000498645 DNERQ8NFT8 737 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms