RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TTLL4Q14679 1199 aa17.42■□□□□ 0.38
TRAF4-212ENST00000498540 ZMYM1Q5SVZ6 1142 aa17.42■□□□□ 0.38
TRAF4-212ENST00000498540 RPUSD2Q8IZ73 545 aaKnown RBP17.42■□□□□ 0.38
TRAF4-212ENST00000498540 PI4K2BQ8TCG2 481 aa17.42■□□□□ 0.38
TRAF4-212ENST00000498540 NECAB3Q96P71 396 aaPredicted RBP17.42■□□□□ 0.38
TRAF4-212ENST00000498540 PCDHA11Q9Y5I1 949 aa17.42■□□□□ 0.38
TRAF4-212ENST00000498540 XIRP2A4UGR9 3374 aa17.41■□□□□ 0.38
TRAF4-212ENST00000498540 TSPY2A6NKD2 308 aa17.41■□□□□ 0.38
TRAF4-212ENST00000498540 ICAM1P05362 532 aa17.41■□□□□ 0.38
TRAF4-212ENST00000498540 ATP2A2P16615 1042 aaKnown RBP17.41■□□□□ 0.38
TRAF4-212ENST00000498540 TFF2Q03403 129 aa17.41■□□□□ 0.38
TRAF4-212ENST00000498540 CTDSPL2Q05D32 466 aa17.41■□□□□ 0.38
TRAF4-212ENST00000498540 LRRFIP1Q32MZ4 808 aaKnown RBP17.41■□□□□ 0.38
TRAF4-212ENST00000498540 DUSP28Q4G0W2 176 aa17.41■□□□□ 0.38
TRAF4-212ENST00000498540 IL27Q8NEV9 243 aa17.41■□□□□ 0.38
TRAF4-212ENST00000498540 FSD1Q9BTV5 496 aa17.41■□□□□ 0.38
TRAF4-212ENST00000498540 TNKSO95271 1327 aa17.41■□□□□ 0.38
TRAF4-212ENST00000498540 SCN10AQ9Y5Y9 1956 aa17.4■□□□□ 0.38
TRAF4-212ENST00000498540 NFIBO00712 420 aa17.4■□□□□ 0.38
TRAF4-212ENST00000498540 ALDH5A1P51649 535 aaPredicted RBP17.4■□□□□ 0.38
TRAF4-212ENST00000498540 PURAQ00577 322 aaKnown RBP17.4■□□□□ 0.38
TRAF4-212ENST00000498540 BAATQ14032 418 aaPredicted RBP17.4■□□□□ 0.38
TRAF4-212ENST00000498540 CCDC96Q2M329 555 aa17.4■□□□□ 0.38
TRAF4-212ENST00000498540 PPP4R3BQ5MIZ7 849 aa17.4■□□□□ 0.38
TRAF4-212ENST00000498540 TTBK2Q6IQ55 1244 aa17.4■□□□□ 0.38
TRAF4-212ENST00000498540 DEFB128Q7Z7B8 93 aa17.4■□□□□ 0.38
TRAF4-212ENST00000498540 OTUD7AQ8TE49 926 aaPredicted RBP17.4■□□□□ 0.38
TRAF4-212ENST00000498540 RANBP17Q9H2T7 1088 aaKnown RBP17.4■□□□□ 0.38
TRAF4-212ENST00000498540 TTC41PQ6P2S7 1318 aa17.4■□□□□ 0.38
TRAF4-212ENST00000498540 PRRC2BQ5JSZ5 2229 aaKnown RBP17.4■□□□□ 0.38
TRAF4-212ENST00000498540 RFXAPO00287 272 aa17.39■□□□□ 0.37
TRAF4-212ENST00000498540 CA3P07451 260 aa17.39■□□□□ 0.37
TRAF4-212ENST00000498540 MYL3P08590 195 aa17.39■□□□□ 0.37
TRAF4-212ENST00000498540 SLC16A2P36021 539 aa17.39■□□□□ 0.37
TRAF4-212ENST00000498540 PPP1R13LQ8WUF5 828 aa17.39■□□□□ 0.37
TRAF4-212ENST00000498540 WDR11Q9BZH6 1224 aa17.39■□□□□ 0.37
TRAF4-212ENST00000498540 POLR3EQ9NVU0 708 aa17.39■□□□□ 0.37
TRAF4-212ENST00000498540 PFKMP08237 780 aa17.38■□□□□ 0.37
TRAF4-212ENST00000498540 BMP1P13497 986 aa17.38■□□□□ 0.37
TRAF4-212ENST00000498540 NOVP48745 357 aa17.38■□□□□ 0.37
TRAF4-212ENST00000498540 KCNQ1P51787 676 aa17.38■□□□□ 0.37
TRAF4-212ENST00000498540 SLC30A10Q6XR72 485 aa17.38■□□□□ 0.37
TRAF4-212ENST00000498540 DCAF4Q8WV16 495 aa17.38■□□□□ 0.37
TRAF4-212ENST00000498540 TSPYL2Q9H2G4 693 aaPredicted RBP17.38■□□□□ 0.37
TRAF4-212ENST00000498540 CERS4Q9HA82 394 aa17.38■□□□□ 0.37
TRAF4-212ENST00000498540 ADD3Q9UEY8 706 aaKnown RBP17.38■□□□□ 0.37
TRAF4-212ENST00000498540 PTPRSQ13332 1948 aa17.37■□□□□ 0.37
TRAF4-212ENST00000498540 RBM47A0AV96 593 aaKnown RBP17.37■□□□□ 0.37
TRAF4-212ENST00000498540 PTPDC1A2A3K4 754 aa17.37■□□□□ 0.37
TRAF4-212ENST00000498540 EPOPA6NHQ4 379 aa17.37■□□□□ 0.37
TRAF4-212ENST00000498540 ERC2O15083 957 aa17.37■□□□□ 0.37
TRAF4-212ENST00000498540 RANBP6O60518 1105 aaKnown RBP17.37■□□□□ 0.37
TRAF4-212ENST00000498540 SUPT20HL2P0C7V6 817 aa17.37■□□□□ 0.37
TRAF4-212ENST00000498540 CPT1AP50416 773 aa17.37■□□□□ 0.37
TRAF4-212ENST00000498540 TMEM67Q5HYA8 995 aa17.37■□□□□ 0.37
TRAF4-212ENST00000498540 VPS53Q5VIR6 699 aa17.37■□□□□ 0.37
TRAF4-212ENST00000498540 BTNL9Q6UXG8 535 aa17.37■□□□□ 0.37
TRAF4-212ENST00000498540 OR6J1Q8NGC5 347 aa17.37■□□□□ 0.37
TRAF4-212ENST00000498540 MTCH2Q9Y6C9 303 aa17.37■□□□□ 0.37
TRAF4-212ENST00000498540 FRMPD2Q68DX3 1309 aaPredicted RBP17.37■□□□□ 0.37
TRAF4-212ENST00000498540 TET1Q8NFU7 2136 aa17.36■□□□□ 0.37
TRAF4-212ENST00000498540 COL4A4P53420 1690 aaPredicted RBP17.36■□□□□ 0.37
TRAF4-212ENST00000498540 ARHGEF15O94989 841 aa17.36■□□□□ 0.37
TRAF4-212ENST00000498540 SKIV2LQ15477 1246 aaKnown RBP17.36■□□□□ 0.37
TRAF4-212ENST00000498540 NBPF20Q3BBV1 942 aa17.36■□□□□ 0.37
TRAF4-212ENST00000498540 FAM47CQ5HY64 1035 aa17.36■□□□□ 0.37
TRAF4-212ENST00000498540 SYDE2Q5VT97 1194 aa17.36■□□□□ 0.37
TRAF4-212ENST00000498540 KRT40Q6A162 431 aa17.36■□□□□ 0.37
TRAF4-212ENST00000498540 MTG1Q9BT17 334 aaPredicted RBP17.36■□□□□ 0.37
TRAF4-212ENST00000498540 LOC102724159A0A0B4J2E5 919 aa17.35■□□□□ 0.37
TRAF4-212ENST00000498540 ORC4O43929 436 aa17.35■□□□□ 0.37
TRAF4-212ENST00000498540 CALML3P27482 149 aa17.35■□□□□ 0.37
TRAF4-212ENST00000498540 PWP2Q15269 919 aaKnown RBP17.35■□□□□ 0.37
TRAF4-212ENST00000498540 DIEXFQ68CQ4 756 aaKnown RBP17.35■□□□□ 0.37
TRAF4-212ENST00000498540 CLEC4DQ8WXI8 215 aa17.35■□□□□ 0.37
TRAF4-212ENST00000498540 COPS5Q92905 334 aa17.35■□□□□ 0.37
TRAF4-212ENST00000498540 SLC9A7Q96T83 725 aa17.35■□□□□ 0.37
TRAF4-212ENST00000498540 GPCPD1Q9NPB8 672 aa17.35■□□□□ 0.37
TRAF4-212ENST00000498540 GPHNQ9NQX3 736 aaPredicted RBP17.35■□□□□ 0.37
TRAF4-212ENST00000498540 ANAPC4Q9UJX5 808 aa17.35■□□□□ 0.37
TRAF4-212ENST00000498540 IQCF3P0C7M6 154 aa17.34■□□□□ 0.37
TRAF4-212ENST00000498540 ACTN1P12814 892 aa17.34■□□□□ 0.37
TRAF4-212ENST00000498540 POU3F3P20264 500 aaPredicted RBP17.34■□□□□ 0.37
TRAF4-212ENST00000498540 TRIP12Q14669 1992 aaPredicted RBP17.34■□□□□ 0.37
TRAF4-212ENST00000498540 PPP2R5BQ15173 497 aa17.34■□□□□ 0.37
TRAF4-212ENST00000498540 TMEM47Q9BQJ4 181 aa17.34■□□□□ 0.37
TRAF4-212ENST00000498540 PITPNM1O00562 1244 aa17.33■□□□□ 0.36
TRAF4-212ENST00000498540 GTPBP6O43824 516 aaPredicted RBP17.33■□□□□ 0.36
TRAF4-212ENST00000498540 FGRP09769 529 aa17.33■□□□□ 0.36
TRAF4-212ENST00000498540 MX1P20591 662 aa17.33■□□□□ 0.36
TRAF4-212ENST00000498540 EDNRBP24530 442 aa17.33■□□□□ 0.36
TRAF4-212ENST00000498540 RFC2P35250 354 aa17.33■□□□□ 0.36
TRAF4-212ENST00000498540 PLA2G5P39877 138 aa17.33■□□□□ 0.36
TRAF4-212ENST00000498540 TAP1Q03518 808 aa17.33■□□□□ 0.36
TRAF4-212ENST00000498540 PDE4DQ08499 809 aa17.33■□□□□ 0.36
TRAF4-212ENST00000498540 AAK1Q2M2I8 961 aa17.33■□□□□ 0.36
TRAF4-212ENST00000498540 NFRKBQ6P4R8 1299 aa17.33■□□□□ 0.36
TRAF4-212ENST00000498540 RNF207Q6ZRF8 634 aa17.33■□□□□ 0.36
TRAF4-212ENST00000498540 SPRED2Q7Z698 418 aa17.33■□□□□ 0.36
TRAF4-212ENST00000498540 ARNTL2Q8WYA1 636 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms