RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 VPS37DQ86XT2 251 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 IQCKQ8N0W5 287 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 MARCH10Q8NA82 808 aaPredicted RBP12.8□□□□□ -0.36
PBX1-211ENST00000498497 NAA15Q9BXJ9 866 aaKnown RBP12.8□□□□□ -0.36
PBX1-211ENST00000498497 AGPAT5Q9NUQ2 364 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 C9orf78Q9NZ63 289 aaPredicted RBP12.8□□□□□ -0.36
PBX1-211ENST00000498497 TMOD4Q9NZQ9 345 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 ADD3Q9UEY8 706 aaKnown RBP12.8□□□□□ -0.36
PBX1-211ENST00000498497 YEATS2Q9ULM3 1422 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 FTCDO95954 541 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 TRIM21P19474 475 aaKnown RBP12.8□□□□□ -0.36
PBX1-211ENST00000498497 CCND1P24385 295 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 KIF5AQ12840 1032 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 HDGFL1Q5TGJ6 251 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 OTUD6AQ7L8S5 288 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 ARFGAP2Q8N6H7 521 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 SUPT20HQ8NEM7 779 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 CASKIN2Q8WXE0 1202 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 CHMP6Q96FZ7 201 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 PRMT1Q99873 361 aaKnown RBP12.8□□□□□ -0.36
PBX1-211ENST00000498497 NACA2Q9H009 215 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 GOLPH3Q9H4A6 298 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 DDX21Q9NR30 783 aaKnown RBP eCLIP12.8□□□□□ -0.36
PBX1-211ENST00000498497 NPHP4O75161 1426 aaPredicted RBP12.8□□□□□ -0.36
PBX1-211ENST00000498497 MYH10P35580 1976 aa12.8□□□□□ -0.36
PBX1-211ENST00000498497 PSMD14O00487 310 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 GNA14O95837 355 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 PYGMP11217 842 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 YY1P25490 414 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 PPP2R2AP63151 447 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 ZNF449Q6P9G9 518 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 XPO6Q96QU8 1125 aaKnown RBP12.79□□□□□ -0.36
PBX1-211ENST00000498497 CARD9Q9H257 536 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 DPH5Q9H2P9 285 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 HAUS4Q9H6D7 363 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.79□□□□□ -0.36
PBX1-211ENST00000498497 LUC7L2Q9Y383 392 aaKnown RBP12.79□□□□□ -0.36
PBX1-211ENST00000498497 ITIH6Q6UXX5 1313 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 HMGB1P1B2RPK0 211 aaPredicted RBP12.79□□□□□ -0.36
PBX1-211ENST00000498497 DRD4P21917 467 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 FLT3P36888 993 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 NCALDP61601 193 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 TYW1BQ6NUM6 668 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 IFT20Q8IY31 132 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 TRIML1Q8N9V2 468 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 NMD3Q96D46 503 aaKnown RBP12.79□□□□□ -0.36
PBX1-211ENST00000498497 UNC45AQ9H3U1 944 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 ETNK1Q9HBU6 452 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 EPB41P11171 864 aaKnown RBP12.79□□□□□ -0.36
PBX1-211ENST00000498497 IARSP41252 1262 aaKnown RBP12.79□□□□□ -0.36
PBX1-211ENST00000498497 PPP4R3AQ6IN85 833 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 RNF10Q8N5U6 811 aaKnown RBP12.79□□□□□ -0.36
PBX1-211ENST00000498497 TTC8Q8TAM2 541 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 TRIM11Q96F44 468 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 CLMNQ96JQ2 1002 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 NUDCD1Q96RS6 583 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 ESF1Q9H501 851 aaKnown RBP12.79□□□□□ -0.36
PBX1-211ENST00000498497 POLR3EQ9NVU0 708 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 SCOCQ9UIL1 159 aa12.79□□□□□ -0.36
PBX1-211ENST00000498497 UBN2Q6ZU65 1347 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 FOXO6A8MYZ6 492 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 CHL1O00533 1208 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 ENTPD5O75356 428 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 LDHAP00338 332 aaKnown RBP12.78□□□□□ -0.36
PBX1-211ENST00000498497 CHN1P15882 459 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 HSD17B3P37058 310 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 RASA3Q14644 834 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 CDC37Q16543 378 aaPredicted RBP12.78□□□□□ -0.36
PBX1-211ENST00000498497 GLE1Q53GS7 698 aaKnown RBP12.78□□□□□ -0.36
PBX1-211ENST00000498497 CRELD2Q6UXH1 353 aaPredicted RBP12.78□□□□□ -0.36
PBX1-211ENST00000498497 CAPN12Q6ZSI9 719 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 CYP4X1Q8N118 509 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 ENOX1Q8TC92 643 aaKnown RBP12.78□□□□□ -0.36
PBX1-211ENST00000498497 NELFBQ8WX92 580 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 CLIP3Q96DZ5 547 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 FAM81BQ96LP2 452 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 RIMBP3CA6NJZ7 1639 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 RIMBP3BA6NNM3 1639 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 RIMBP3Q9UFD9 1639 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 TRIM49BA6NDI0 452 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 A6NNZ2 444 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 DPYDQ12882 1025 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 SLC39A14Q15043 492 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 TUBB8Q3ZCM7 444 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 ZNF365Q70YC5 407 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 DHX32Q7L7V1 743 aaKnown RBP12.78□□□□□ -0.36
PBX1-211ENST00000498497 ADAT2Q7Z6V5 191 aaKnown RBP12.78□□□□□ -0.36
PBX1-211ENST00000498497 MICU3Q86XE3 530 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 MIPOL1Q8TD10 442 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 CNKSR1Q969H4 720 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 ZWILCHQ9H900 591 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 KIF24Q5T7B8 1368 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 MADDQ8WXG6 1647 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 ERCC6L2Q5T890 1561 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 NCKAP5LQ9HCH0 1330 aa12.78□□□□□ -0.36
PBX1-211ENST00000498497 PI4KAP2A4QPH2 592 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 PDE6CP51160 858 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 CACNA2D1P54289 1103 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 KIF23Q02241 960 aaPredicted RBP12.77□□□□□ -0.36
PBX1-211ENST00000498497 MKRN4PQ13434 485 aaPredicted RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms