RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 CLEC4MQ9H2X3 399 aaPredicted RBP6.57□□□□□ -1.36
HMGXB4-208ENST00000498325 PHAXQ9H814 394 aaKnown RBP6.57□□□□□ -1.36
HMGXB4-208ENST00000498325 FAM53CQ9NYF3 392 aa6.57□□□□□ -1.36
HMGXB4-208ENST00000498325 CHPF2Q9P2E5 772 aa6.57□□□□□ -1.36
HMGXB4-208ENST00000498325 A0A096LPE4 126 aa6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 A0A1W2PPZ6 126 aa6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 F6X3S4 739 aa6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 CA12O43570 354 aa6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 HMMRO75330 724 aa6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 FAM87AP0C7U9 286 aa6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 MAP2K2P36507 400 aa6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 EIF1AXP47813 144 aaKnown RBP6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 CST9Q5W186 159 aa6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 KSR2Q6VAB6 950 aa6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 CILP2Q8IUL8 1156 aa6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 ZSCAN18Q8TBC5 510 aaPredicted RBP6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 HELQQ8TDG4 1101 aa6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 DNAAF4Q8WXU2 420 aa6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 SRCIN1Q9C0H9 1055 aa6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 FOXD3Q9UJU5 478 aaPredicted RBP6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 ADAMTSL1Q8N6G6 1762 aa6.56□□□□□ -1.36
HMGXB4-208ENST00000498325 CASP8AP2Q9UKL3 1982 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 PI4KAP2A4QPH2 592 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 IQCA1LA6NCM1 817 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 ALDH1L1O75891 902 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 ECEL1O95672 775 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 GNAI2P04899 355 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 NEXNQ0ZGT2 675 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 MLANAQ16655 118 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 IFI16Q16666 785 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 AOC3Q16853 763 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 CIAPIN1Q6FI81 312 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 ZSWIM9Q86XI8 627 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 SMC5Q8IY18 1101 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 ANKRD44Q8N8A2 993 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 PI4KAP1Q8N8J0 262 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 SRP68Q9UHB9 627 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 ASAP1Q9ULH1 1129 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 POLIQ9UNA4 740 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 USP16Q9Y5T5 823 aa6.55□□□□□ -1.36
HMGXB4-208ENST00000498325 NCANO14594 1321 aa6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 PRAMEF22A3QJZ6 481 aa6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 POLRMTO00411 1230 aaKnown RBP6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 PRRG2O14669 202 aa6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 ANXA1P04083 346 aa6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 UBTFL1P0CB47 393 aaPredicted RBP6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 MYL6BP14649 208 aa6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 ATP2B4P23634 1241 aa6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 CFPP27918 469 aa6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 RFC4P35249 363 aa6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 RGS3P49796 1198 aa6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 CDK5R2Q13319 367 aa6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 TTLL6Q8N841 843 aa6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 HRASLS5Q96KN8 279 aa6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 MEIS3Q99687 375 aa6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 C1orf115Q9H7X2 142 aa6.54□□□□□ -1.36
HMGXB4-208ENST00000498325 TRAF5O00463 557 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 ATG7O95352 703 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 STARD3NLO95772 234 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 MPSTP25325 297 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 TM4SF1P30408 202 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 EPHX2P34913 555 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 ATP8B2P98198 1209 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 EHHADHQ08426 723 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 AIMP1Q12904 312 aaKnown RBP6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 KCNMB1Q16558 191 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 BEND3Q5T5X7 828 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 ANGEL2Q5VTE6 544 aaKnown RBP6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 SLC23A3Q6PIS1 610 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 COPS6Q7L5N1 327 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 LRRC56Q8IYG6 542 aaPredicted RBP6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 LINS1Q8NG48 757 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 XAGE3Q8WTP9 111 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 PPP1R16BQ96T49 567 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 TRIM56Q9BRZ2 755 aaKnown RBP6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 C9orf78Q9NZ63 289 aaPredicted RBP6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 MAP3K2Q9Y2U5 619 aa6.53□□□□□ -1.36
HMGXB4-208ENST00000498325 ZNF541Q9H0D2 1346 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 LAMB4A4D0S4 1761 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 UBR2Q8IWV8 1755 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 ZNF503-AS2A6NEH8 195 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 RPS6KA4O75676 772 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 TSPAN15O95858 294 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 NUCB1Q02818 461 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 SPRED3Q2MJR0 410 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 PROSER3Q2NL68 480 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 ANKRD45Q5TZF3 282 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 ALKBH2Q6NS38 261 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 CEP85Q6P2H3 762 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 LCNL1Q6ZST4 164 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 NPM2Q86SE8 214 aaKnown RBP6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 CHD1LQ86WJ1 897 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 C1QL4Q86Z23 238 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 CCNJLQ8IV13 435 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 PLBD2Q8NHP8 589 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 WDR18Q9BV38 432 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 USP44Q9H0E7 712 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 DCTPP1Q9H773 170 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 MKNK2Q9HBH9 465 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms