RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ADGRF1Q5T601 910 aa7.25□□□□□ -1.25
SSR3-209ENST00000498205 OGFOD2Q6N063 350 aa7.25□□□□□ -1.25
SSR3-209ENST00000498205 ZNF552Q9H707 407 aaPredicted RBP7.25□□□□□ -1.25
SSR3-209ENST00000498205 TNFRSF12AQ9NP84 129 aa7.25□□□□□ -1.25
SSR3-209ENST00000498205 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.25□□□□□ -1.25
SSR3-209ENST00000498205 TRAV20A0A0B4J274 112 aa7.24□□□□□ -1.25
SSR3-209ENST00000498205 MYO1BO43795 1136 aa7.24□□□□□ -1.25
SSR3-209ENST00000498205 SEMA7AO75326 666 aa7.24□□□□□ -1.25
SSR3-209ENST00000498205 PLS3P13797 630 aa7.24□□□□□ -1.25
SSR3-209ENST00000498205 MVKQ03426 396 aa7.24□□□□□ -1.25
SSR3-209ENST00000498205 PRR23BQ6ZRT6 265 aa7.24□□□□□ -1.25
SSR3-209ENST00000498205 NPLOC4Q8TAT6 608 aa7.24□□□□□ -1.25
SSR3-209ENST00000498205 DEPDC7Q96QD5 511 aa7.24□□□□□ -1.25
SSR3-209ENST00000498205 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.24□□□□□ -1.251e-7■■■■■ 27.6
SSR3-209ENST00000498205 CLEC1BQ9P126 229 aa7.24□□□□□ -1.25
SSR3-209ENST00000498205 CYBBP04839 570 aa7.23□□□□□ -1.25
SSR3-209ENST00000498205 RASA3Q14644 834 aa7.23□□□□□ -1.25
SSR3-209ENST00000498205 PKN1Q16512 942 aa7.23□□□□□ -1.25
SSR3-209ENST00000498205 PAQR3Q6TCH7 311 aa7.23□□□□□ -1.25
SSR3-209ENST00000498205 RSPO2Q6UXX9 243 aaPredicted RBP7.23□□□□□ -1.25
SSR3-209ENST00000498205 SIRT2Q8IXJ6 389 aa7.23□□□□□ -1.25
SSR3-209ENST00000498205 LZTR1Q8N653 840 aa7.23□□□□□ -1.25
SSR3-209ENST00000498205 PMFBP1Q8TBY8 1022 aa7.23□□□□□ -1.25
SSR3-209ENST00000498205 FRS2Q8WU20 508 aa7.23□□□□□ -1.25
SSR3-209ENST00000498205 DIO2Q92813 273 aa7.23□□□□□ -1.25
SSR3-209ENST00000498205 IPO9Q96P70 1041 aaKnown RBP7.23□□□□□ -1.25
SSR3-209ENST00000498205 SRPK1Q96SB4 655 aaKnown RBP7.23□□□□□ -1.25
SSR3-209ENST00000498205 DIRC2Q96SL1 478 aa7.23□□□□□ -1.25
SSR3-209ENST00000498205 SPATA9Q9BWV2 254 aa7.23□□□□□ -1.25
SSR3-209ENST00000498205 OSBPL2Q9H1P3 480 aa7.23□□□□□ -1.25
SSR3-209ENST00000498205 GPRC5CQ9NQ84 441 aa7.23□□□□□ -1.25
SSR3-209ENST00000498205 C7orf72A4D263 438 aa7.22□□□□□ -1.25
SSR3-209ENST00000498205 TBX1O43435 398 aa7.22□□□□□ -1.25
SSR3-209ENST00000498205 LTBRP36941 435 aa7.22□□□□□ -1.25
SSR3-209ENST00000498205 ECI1P42126 302 aa7.22□□□□□ -1.25
SSR3-209ENST00000498205 YBX1P67809 324 aaKnown RBP7.22□□□□□ -1.25
SSR3-209ENST00000498205 SSRP1Q08945 709 aaKnown RBP7.22□□□□□ -1.25
SSR3-209ENST00000498205 CBX2Q14781 532 aaPredicted RBP7.22□□□□□ -1.25
SSR3-209ENST00000498205 PPIL6Q8IXY8 311 aa7.22□□□□□ -1.25
SSR3-209ENST00000498205 NETO2Q8NC67 525 aa7.22□□□□□ -1.25
SSR3-209ENST00000498205 SNTG2Q9NY99 539 aa7.22□□□□□ -1.25
SSR3-209ENST00000498205 NUDT5Q9UKK9 219 aa7.22□□□□□ -1.25
SSR3-209ENST00000498205 CCDC85CA6NKD9 419 aa7.21□□□□□ -1.26
SSR3-209ENST00000498205 RPL11P62913 178 aaKnown RBP7.21□□□□□ -1.26
SSR3-209ENST00000498205 MESP2Q0VG99 397 aa7.21□□□□□ -1.26
SSR3-209ENST00000498205 SLC35F1Q5T1Q4 408 aa7.21□□□□□ -1.26
SSR3-209ENST00000498205 ZNF605Q86T29 641 aa7.21□□□□□ -1.26
SSR3-209ENST00000498205 CPNE8Q86YQ8 564 aa7.21□□□□□ -1.26
SSR3-209ENST00000498205 TMEM145Q8NBT3 493 aa7.21□□□□□ -1.26
SSR3-209ENST00000498205 KREMEN2Q8NCW0 462 aa7.21□□□□□ -1.26
SSR3-209ENST00000498205 DNAJC2Q99543 621 aaKnown RBP7.21□□□□□ -1.26
SSR3-209ENST00000498205 IER2Q9BTL4 223 aa7.21□□□□□ -1.26
SSR3-209ENST00000498205 TIMM13Q9Y5L4 95 aaPredicted RBP7.21□□□□□ -1.26
SSR3-209ENST00000498205 CCDC163A0A0D9SF12 145 aa7.2□□□□□ -1.26
SSR3-209ENST00000498205 TEX51A0A1B0GUA7 166 aa7.2□□□□□ -1.26
SSR3-209ENST00000498205 EFEMP2O95967 443 aa7.2□□□□□ -1.26
SSR3-209ENST00000498205 GLDCP23378 1020 aa7.2□□□□□ -1.26
SSR3-209ENST00000498205 BICRALQ6AI39 1079 aa7.2□□□□□ -1.26
SSR3-209ENST00000498205 TMEM132EQ6IEE7 984 aa7.2□□□□□ -1.26
SSR3-209ENST00000498205 NSMFQ6X4W1 530 aa7.2□□□□□ -1.26
SSR3-209ENST00000498205 SCUBE1Q8IWY4 988 aa7.2□□□□□ -1.26
SSR3-209ENST00000498205 ZBTB38Q8NAP3 1195 aaPredicted RBP7.2□□□□□ -1.26
SSR3-209ENST00000498205 USP33Q8TEY7 942 aa7.2□□□□□ -1.26
SSR3-209ENST00000498205 C1orf159Q96HA4 380 aa7.2□□□□□ -1.26
SSR3-209ENST00000498205 ZFYVE21Q9BQ24 234 aa7.2□□□□□ -1.26
SSR3-209ENST00000498205 LGR4Q9BXB1 951 aa7.2□□□□□ -1.26
SSR3-209ENST00000498205 ARHGEF4Q9NR80 690 aa7.2□□□□□ -1.26
SSR3-209ENST00000498205 NPFFR2Q9Y5X5 522 aa7.2□□□□□ -1.26
SSR3-209ENST00000498205 SHROOM4Q9ULL8 1493 aa7.19□□□□□ -1.26
SSR3-209ENST00000498205 NFIBO00712 420 aa7.19□□□□□ -1.26
SSR3-209ENST00000498205 ZBTB7AO95365 584 aa7.19□□□□□ -1.26
SSR3-209ENST00000498205 TSPAN15O95858 294 aa7.19□□□□□ -1.26
SSR3-209ENST00000498205 DBHP09172 617 aa7.19□□□□□ -1.26
SSR3-209ENST00000498205 TMEM253P0C7T8 217 aa7.19□□□□□ -1.26
SSR3-209ENST00000498205 PABPC1P11940 636 aaKnown RBP7.19□□□□□ -1.26
SSR3-209ENST00000498205 MAPKAPK2P49137 400 aa7.19□□□□□ -1.26
SSR3-209ENST00000498205 CYP4F3Q08477 520 aa7.19□□□□□ -1.26
SSR3-209ENST00000498205 RAB3GAP1Q15042 981 aa7.19□□□□□ -1.26
SSR3-209ENST00000498205 ZC3H14Q6PJT7 736 aaKnown RBP7.19□□□□□ -1.26
SSR3-209ENST00000498205 SYDE1Q6ZW31 735 aaPredicted RBP7.19□□□□□ -1.26
SSR3-209ENST00000498205 SPATC1Q76KD6 591 aa7.19□□□□□ -1.26
SSR3-209ENST00000498205 DCAF4Q8WV16 495 aa7.19□□□□□ -1.26
SSR3-209ENST00000498205 PEX11GQ96HA9 241 aa7.19□□□□□ -1.26
SSR3-209ENST00000498205 GPR27Q9NS67 375 aa7.19□□□□□ -1.26
SSR3-209ENST00000498205 SIRT5Q9NXA8 310 aa7.19□□□□□ -1.26
SSR3-209ENST00000498205 H7BY64 318 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 DLX3O60479 287 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 MSL3P1P0C860 447 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 MED14OSP0DP75 135 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 GLI4P10075 376 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 NAT1P18440 290 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 GRIA2P42262 883 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 RANGAP1P46060 587 aaPredicted RBP7.18□□□□□ -1.26
SSR3-209ENST00000498205 GALK1P51570 392 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 SLC9A5Q14940 896 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 MROH9Q5TGP6 573 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 DCP2Q8IU60 420 aaKnown RBP7.18□□□□□ -1.26
SSR3-209ENST00000498205 RIOX2Q8IUF8 465 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 Q8N1Y9 231 aa7.18□□□□□ -1.26
SSR3-209ENST00000498205 KCNN1Q92952 543 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms