RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 NBPF12Q5TAG4 269 aaPredicted RBP9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 SCYL3Q8IZE3 742 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 RASSF8Q8NHQ8 419 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 DHX58Q96C10 678 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 WRNIP1Q96S55 665 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 PYM1Q9BRP8 204 aaKnown RBP9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 CBX8Q9HC52 389 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 KIAA1468Q9P260 1216 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 USP25Q9UHP3 1055 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 SERTAD1Q9UHV2 236 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 A0A087WWV3 80 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 A0A087X0B3 334 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 BIN1O00499 593 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 CTNND1O60716 968 aaKnown RBP9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 GABBR2O75899 941 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 DDNO94850 711 aaPredicted RBP9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 TDP2O95551 362 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 INPP5BP32019 993 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 EPS15P42566 896 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 ZNF165P49910 485 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 NLRP12P59046 1061 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 TRAF1Q13077 416 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 MTMR2Q13614 643 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 CALCRLQ16602 461 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 DPCR1Q3MIW9 517 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 C9orf131Q5VYM1 1079 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 KANK3Q6NY19 840 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 CCDC174Q6PII3 467 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 DTHD1Q6ZMT9 781 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 USP49Q70CQ1 688 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 LUZP1Q86V48 1076 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 EFCAB3Q8N7B9 438 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 CHURC1Q8WUH1 139 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 LPAR1Q92633 364 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 KIFC2Q96AC6 838 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 TRIM44Q96DX7 344 aaPredicted RBP9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 EPSTI1Q96J88 318 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 NAP1L4Q99733 375 aaKnown RBP9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 TANGO6Q9C0B7 1094 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 NAT10Q9H0A0 1025 aaKnown RBP9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 TMEM60Q9H2L4 133 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 RANBP17Q9H2T7 1088 aaKnown RBP9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 PSTPIP2Q9H939 334 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 AS3MTQ9HBK9 375 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 PICK1Q9NRD5 415 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 ADARB2Q9NS39 739 aaKnown RBP9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 FEM1BQ9UK73 627 aa9.15□□□□□ -0.94
PDZRN3-212ENST00000498048 ABCB11O95342 1321 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 ZC3H4Q9UPT8 1303 aaKnown RBP9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 SPDYE3A6NKU9 549 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 GOLGA6L19H0YKK7 550 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 SLC37A4O43826 429 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 PLA2G6O60733 806 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 GCFC2P16383 781 aaKnown RBP9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 TIE1P35590 1138 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 STAT6P42226 847 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 USP14P54578 494 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 TMEM266Q2M3C6 531 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 LONRF3Q496Y0 759 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 MCTP2Q6DN12 878 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 GRAMD1CQ8IYS0 662 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 AOPEPQ8N6M6 819 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 C4orf32Q8N8J7 132 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 SMARCE1Q969G3 411 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 PPP1R9BQ96SB3 815 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 SLF1Q9BQI6 1058 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 KIAA1683Q9H0B3 1180 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 DISC1Q9NRI5 854 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 BMP2KQ9NSY1 1161 aaPredicted RBP9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 TUBE1Q9UJT0 475 aa9.14□□□□□ -0.95
PDZRN3-212ENST00000498048 TTLL13PA6NNM8 815 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 BECN2A8MW95 431 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 USP17L15C9J2P7 530 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 USP17L13C9JLJ4 530 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 USP17L11C9JVI0 530 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 USP17L18D6R9N7 530 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 USP17L22D6RA61 530 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 USP17L17D6RBQ6 530 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 USP17L19D6RCP7 530 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 USP17L20D6RJB6 530 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 FOXN1O15353 648 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 VCAM1P19320 739 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 USP17L24Q0WX57 530 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 KARSQ15046 597 aaKnown RBP9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 IL17AQ16552 155 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 NOL9Q5SY16 702 aaKnown RBP9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 USP17L6PQ6QN14 398 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 ELOA2Q8IYF1 753 aaPredicted RBP9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 PDLIM2Q96JY6 352 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 AK8Q96MA6 479 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 EHMT1Q9H9B1 1298 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 FBXO28Q9NVF7 368 aa9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 DDX25Q9UHL0 483 aaKnown RBP9.13□□□□□ -0.95
PDZRN3-212ENST00000498048 PP2D1A8MPX8 630 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 ADM5C9JUS6 153 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 MEIS2O14770 477 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 GTPBP6O43824 516 aaPredicted RBP9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 SMC2O95347 1197 aa9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 FOSP01100 380 aaPredicted RBP9.12□□□□□ -0.95
PDZRN3-212ENST00000498048 PTMAP06454 111 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms