RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ZKSCAN5Q9Y2L8 839 aa7.39□□□□□ -1.23
BRCA1-224ENST00000497488 TRIM75PA6NK02 468 aa7.38□□□□□ -1.23
BRCA1-224ENST00000497488 DCDC2CA8MYV0 355 aa7.38□□□□□ -1.23
BRCA1-224ENST00000497488 AQP7O14520 342 aa7.38□□□□□ -1.23
BRCA1-224ENST00000497488 CLEC3AO75596 197 aa7.38□□□□□ -1.23
BRCA1-224ENST00000497488 APPP05067 770 aa7.38□□□□□ -1.23
BRCA1-224ENST00000497488 TRIM14Q14142 442 aa7.38□□□□□ -1.23
BRCA1-224ENST00000497488 CCDC144CPQ8IYA2 1237 aa7.38□□□□□ -1.23
BRCA1-224ENST00000497488 CRACR2BQ8N4Y2 399 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-224ENST00000497488 CHTF18Q8WVB6 975 aa7.38□□□□□ -1.23
BRCA1-224ENST00000497488 GAS2L1Q99501 681 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-224ENST00000497488 RNF38Q9H0F5 515 aa7.38□□□□□ -1.23
BRCA1-224ENST00000497488 CYP26B1Q9NR63 512 aa7.38□□□□□ -1.23
BRCA1-224ENST00000497488 EVLQ9UI08 416 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-224ENST00000497488 ZNF451Q9Y4E5 1061 aa7.38□□□□□ -1.23
BRCA1-224ENST00000497488 SPDYE3A6NKU9 549 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 TRAF5O00463 557 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 SOX1O00570 391 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-224ENST00000497488 XPOTO43592 962 aaKnown RBP7.37□□□□□ -1.23
BRCA1-224ENST00000497488 OFD1O75665 1012 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 AVPP01185 164 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 SOD2P04179 222 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 HRGP04196 525 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 THBS1P07996 1170 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 BMP2P12643 396 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 TNFAIP3P21580 790 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 AKAP5P24588 427 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 TBX2Q13207 712 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-224ENST00000497488 CNGB1Q14028 1251 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-224ENST00000497488 PLA2G4EQ3MJ16 856 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 ANKRD39Q53RE8 183 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 STYK1Q6J9G0 422 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 MAATS1Q7Z4T9 603 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 SAPCD2Q86UD0 394 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 SLC41A1Q8IVJ1 513 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 MCATQ8IVS2 390 aaKnown RBP7.37□□□□□ -1.23
BRCA1-224ENST00000497488 ARHGEF39Q8N4T4 335 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 IGSF22Q8N9C0 903 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 SPATA5Q8NB90 893 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 TMEM145Q8NBT3 493 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 IL17REQ8NFR9 667 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 DIO2Q92813 273 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 PGBD4Q96DM1 585 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 C1orf159Q96HA4 380 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 CCDC138Q96M89 665 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 CCDC140Q96MF4 163 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 CRB3Q9BUF7 120 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 WNT10AQ9GZT5 417 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 SOX17Q9H6I2 414 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-224ENST00000497488 LGR6Q9HBX8 967 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 SH2B1Q9NRF2 756 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-224ENST00000497488 TJP2Q9UDY2 1190 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 HDAC9Q9UKV0 1011 aa7.37□□□□□ -1.23
BRCA1-224ENST00000497488 KLHL33A6NCF5 533 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 WDR64B1ANS9 1081 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 ST8SIA5O15466 376 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 ZNF862O60290 1169 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 ECEL1O95672 775 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 ATP2A2P16615 1042 aaKnown RBP7.36□□□□□ -1.23
BRCA1-224ENST00000497488 NAT1P18440 290 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 KPNA1P52294 538 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-224ENST00000497488 ETF1P62495 437 aaKnown RBP7.36□□□□□ -1.23
BRCA1-224ENST00000497488 GUCY1A3Q02108 690 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 GSTM4Q03013 218 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 UBAP2LQ14157 1087 aaKnown RBP7.36□□□□□ -1.23
BRCA1-224ENST00000497488 LRRC32Q14392 662 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 ZNF267Q14586 743 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-224ENST00000497488 TOMM20Q15388 145 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 PDCD2Q16342 344 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-224ENST00000497488 PCSK7Q16549 785 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 SLC35F1Q5T1Q4 408 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 GTF2IRD2BQ6EKJ0 949 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 GTF2IRD2Q86UP8 949 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 C12orf40Q86WS4 652 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 CCT6BQ92526 530 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 HPS1Q92902 700 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 SLC5A5Q92911 643 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 BRF1Q92994 677 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 FAM193BQ96PV7 902 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-224ENST00000497488 LACRTQ9GZZ8 138 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 FAM204AQ9H8W3 233 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 CABP5Q9NP86 173 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 B4GALT6Q9UBX8 382 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 INVSQ9Y283 1065 aa7.36□□□□□ -1.23
BRCA1-224ENST00000497488 TTLL8A6PVC2 850 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 hCG_1984214I3L0E3 225 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 TLR5O60602 858 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 KCNH1O95259 989 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 CYP11A1P05108 521 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 MYBP10242 640 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 CD247P20963 164 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 HOXC12P31275 282 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 GRK6P43250 576 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 KCNJ6P48051 423 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 EIF5P55010 431 aaKnown RBP7.35□□□□□ -1.23
BRCA1-224ENST00000497488 NEUROD1Q13562 356 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 USP53Q70EK8 1073 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 MICALL1Q8N3F8 863 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 ZBTB34Q8NCN2 500 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 ADCY4Q8NFM4 1077 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms