RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 ALDH1L1O75891 902 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 GLRX3O76003 335 aaKnown RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 RPS6KA3P51812 740 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.35□□□□□ -1.39
USF3-204ENST00000496826 NCAPH2Q6IBW4 605 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 VSIG1Q86XK7 387 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 GRK7Q8WTQ7 553 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 B3GALT6Q96L58 329 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 PSIP1O75475 530 aaKnown RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 DCTN3O75935 186 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 DDAH1O94760 285 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 GNAT2P19087 354 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 CTNNA1P35221 906 aaKnown RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 TTC22Q5TAA0 569 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 BTNL9Q6UXG8 535 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 CYTH2Q99418 400 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 RAD21L1Q9H4I0 556 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 VIPAS39Q9H9C1 493 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 PCDH18Q9HCL0 1135 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 KCNK9Q9NPC2 374 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 VAV3Q9UKW4 847 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 ATP11BQ9Y2G3 1177 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 XPOTO43592 962 aaKnown RBP6.34□□□□□ -1.39
USF3-204ENST00000496826 KRT75O95678 551 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 ATP2B1P20020 1258 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 AP2B1P63010 937 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 FAM160A2Q8N612 972 aaPredicted RBP6.34□□□□□ -1.39
USF3-204ENST00000496826 UXS1Q8NBZ7 420 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 GATAD2BQ8WXI9 593 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 TSC22D3Q99576 134 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 MIS18AQ9NYP9 233 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 FAM50BQ9Y247 325 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 FRMD4BQ9Y2L6 1034 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 H0YCG3 227 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 LIG3P49916 1009 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 TBC1D8BQ0IIM8 1120 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 KLC3Q6P597 504 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 TTC23LQ6PF05 361 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 PRIMPOLQ96LW4 560 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 FAM45BPQ6NSW5 357 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 DYMQ7RTS9 669 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 KRT73Q86Y46 540 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 RMDN1Q96DB5 314 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 RRP36Q96EU6 259 aaKnown RBP6.34□□□□□ -1.39
USF3-204ENST00000496826 MCCC1Q96RQ3 725 aaPredicted RBP6.34□□□□□ -1.39
USF3-204ENST00000496826 TRIM6Q9C030 488 aaPredicted RBP6.34□□□□□ -1.39
USF3-204ENST00000496826 POLE4Q9NR33 117 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 PTPRCP08575 1304 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 KRT37O76014 449 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 MFN2O95140 757 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 CHGBP05060 677 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 HSD3B1P14060 373 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 MAN1A1P33908 653 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 MLH1P40692 756 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 SESN3P58005 492 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 COG2Q14746 738 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 CHMP1BQ7LBR1 199 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 TSSK1BQ9BXA7 367 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 CARD14Q9BXL6 1004 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 GHRLQ9UBU3 117 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.34□□□□□ -1.39
USF3-204ENST00000496826 WDR64B1ANS9 1081 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 BRAFP15056 766 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 DNM2P50570 870 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 ANXA11P50995 505 aaKnown RBP6.34□□□□□ -1.39
USF3-204ENST00000496826 NFE2L2Q16236 605 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 EIF2S3LQ2VIR3 472 aaKnown RBP6.34□□□□□ -1.39
USF3-204ENST00000496826 CAPN12Q6ZSI9 719 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 ARMCX6Q7L4S7 300 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 APPL2Q8NEU8 664 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 PIK3R5Q8WYR1 880 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 RILPQ96NA2 401 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 DNAJC7Q99615 494 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 SIKE1Q9BRV8 207 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 PRKD2Q9BZL6 878 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 NPHS2Q9NP85 383 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 PPANQ9NQ55 473 aaKnown RBP6.34□□□□□ -1.39
USF3-204ENST00000496826 CHIC2Q9UKJ5 165 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 DMTF1Q9Y222 760 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 GPRASP1Q5JY77 1395 aa6.34□□□□□ -1.39
USF3-204ENST00000496826 TBC1D4O60343 1298 aa6.34□□□□□ -1.4
USF3-204ENST00000496826 LDOC1O95751 146 aaPredicted RBP6.34□□□□□ -1.4
USF3-204ENST00000496826 APOA5Q6Q788 366 aa6.34□□□□□ -1.4
USF3-204ENST00000496826 P3H3Q8IVL6 736 aa6.34□□□□□ -1.4
USF3-204ENST00000496826 TMTC2Q8N394 836 aa6.34□□□□□ -1.4
USF3-204ENST00000496826 PLEKHA4Q9H4M7 779 aa6.34□□□□□ -1.4
USF3-204ENST00000496826 UBAP1Q9NZ09 502 aa6.34□□□□□ -1.4
USF3-204ENST00000496826 PNMA8BQ9ULN7 279 aaPredicted RBP6.34□□□□□ -1.4
USF3-204ENST00000496826 H0YJX3 145 aa6.33□□□□□ -1.4
USF3-204ENST00000496826 S100A5P33763 92 aa6.33□□□□□ -1.4
USF3-204ENST00000496826 UBA7P41226 1012 aa6.33□□□□□ -1.4
USF3-204ENST00000496826 TRPC1P48995 793 aa6.33□□□□□ -1.4
USF3-204ENST00000496826 BTN3A2P78410 334 aa6.33□□□□□ -1.4
USF3-204ENST00000496826 RABL6Q3YEC7 729 aaPredicted RBP6.33□□□□□ -1.4
USF3-204ENST00000496826 CC2D2BQ6DHV5 1058 aa6.33□□□□□ -1.4
USF3-204ENST00000496826 SLC25A24Q6NUK1 477 aa6.33□□□□□ -1.4
USF3-204ENST00000496826 ABRAXAS1Q6UWZ7 409 aa6.33□□□□□ -1.4
USF3-204ENST00000496826 SKAP1Q86WV1 359 aa6.33□□□□□ -1.4
USF3-204ENST00000496826 XXYLT1Q8NBI6 393 aa6.33□□□□□ -1.4
USF3-204ENST00000496826 MLPHQ9BV36 600 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms