RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 SMC2O95347 1197 aa15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 YBX3P16989 372 aaKnown RBP eCLIP15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 AP3B2Q13367 1082 aa15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 DGKZQ13574 1117 aa15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 APOBEC3FQ8IUX4 373 aaKnown RBP15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 HAS1Q92839 578 aa15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 FEZ1Q99689 392 aa15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 KIAA1683Q9H0B3 1180 aa15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 BLZF1Q9H2G9 400 aa15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 GINM1Q9NU53 330 aa15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 GGA3Q9NZ52 723 aa15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 DDX25Q9UHL0 483 aaKnown RBP15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 ZNF112Q9UJU3 913 aa15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 FEM1BQ9UK73 627 aa15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 FZD1Q9UP38 647 aa15.46■□□□□ 0.07
SPTBN1-205ENST00000496323 DDNO94850 711 aaPredicted RBP15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 PTMAP06454 111 aaKnown RBP15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 STAT6P42226 847 aa15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 FXR2P51116 673 aaKnown RBP eCLIP15.45■□□□□ 0.065e-17■■■■□ 25.2
SPTBN1-205ENST00000496323 CUL4BQ13620 913 aa15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 RRAGBQ5VZM2 374 aa15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 CCDC174Q6PII3 467 aa15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 FAM160B2Q86V87 743 aa15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 PLIN2Q99541 437 aa15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 HOXA13P31271 388 aaPredicted RBP15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 USP11P51784 963 aa15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 CABP7Q86V35 215 aa15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 ZSCAN30Q86W11 494 aa15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 MLKLQ8NB16 471 aa15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 GJA10Q969M2 543 aa15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 GSDMAQ96QA5 445 aa15.45■□□□□ 0.06
SPTBN1-205ENST00000496323 CYP3A7-CYP3A51PA0A087WV96 503 aa15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 SMTNL1A8MU46 457 aa15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 PIK3CDO00329 1044 aa15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 GCFC2P16383 781 aaKnown RBP15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 CYP3A7P24462 503 aa15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 FMR1Q06787 632 aaKnown RBP eCLIP15.44■□□□□ 0.063e-7■■■□□ 16.3
SPTBN1-205ENST00000496323 DCAF15Q66K64 600 aa15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 SPC24Q8NBT2 197 aa15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 MBOAT7Q96N66 472 aa15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 MED15Q96RN5 788 aa15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 GTPBP6O43824 516 aaPredicted RBP15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 PLCG1P19174 1290 aa15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 ARHGAP4P98171 946 aa15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 MYL5Q02045 173 aa15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 TBC1D5Q92609 795 aa15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 LPAR1Q92633 364 aa15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 ZKSCAN4Q969J2 545 aaPredicted RBP15.44■□□□□ 0.06
SPTBN1-205ENST00000496323 SCYL3Q8IZE3 742 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 RASSF8Q8NHQ8 419 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 TTC12Q9H892 705 aaPredicted RBP15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 RTN4Q9NQC3 1192 aaKnown RBP15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 EMILIN3Q9NT22 766 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 KBTBD4Q9NVX7 518 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 RNF181Q9P0P0 153 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 POTEMA6NI47 508 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 WDR46O15213 610 aaKnown RBP15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 CD44P16070 742 aaKnown RBP15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 SREBF1P36956 1147 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 MTMR2Q13614 643 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 PDIA5Q14554 519 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 MCTP2Q6DN12 878 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 MRFAP1L1Q96HT8 127 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 ZNF830Q96NB3 372 aaPredicted RBP15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 WRNIP1Q96S55 665 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 KCNMB3Q9NPA1 279 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 LRWD1Q9UFC0 647 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 ZKSCAN5Q9Y2L8 839 aa15.43■□□□□ 0.06
SPTBN1-205ENST00000496323 SPDYE3A6NKU9 549 aa15.42■□□□□ 0.06
SPTBN1-205ENST00000496323 FOSP01100 380 aaPredicted RBP15.42■□□□□ 0.06
SPTBN1-205ENST00000496323 ATP1A3P13637 1013 aa15.42■□□□□ 0.06
SPTBN1-205ENST00000496323 LMOD1P29536 600 aaPredicted RBP15.42■□□□□ 0.06
SPTBN1-205ENST00000496323 MOXD1Q6UVY6 613 aa15.42■□□□□ 0.06
SPTBN1-205ENST00000496323 LDHDQ86WU2 507 aa15.42■□□□□ 0.06
SPTBN1-205ENST00000496323 NAP1L4Q99733 375 aaKnown RBP15.42■□□□□ 0.06
SPTBN1-205ENST00000496323 NUDT12Q9BQG2 462 aa15.42■□□□□ 0.06
SPTBN1-205ENST00000496323 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.42■□□□□ 0.06
SPTBN1-205ENST00000496323 SSC5DA1L4H1 1573 aa15.42■□□□□ 0.06
SPTBN1-205ENST00000496323 ZNF536O15090 1300 aa15.42■□□□□ 0.06
SPTBN1-205ENST00000496323 PTPRAP18433 802 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 CDC25BP30305 580 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 TRAF1Q13077 416 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 SPP2Q13103 211 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 GRB10Q13322 594 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 TMEM266Q2M3C6 531 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 SMYD4Q8IYR2 804 aaPredicted RBP15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 LENG9Q96B70 501 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 PNMA5Q96PV4 448 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 WDR18Q9BV38 432 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 FANCLQ9NW38 375 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 PPP2R3BQ9Y5P8 575 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 PPP1R3GB7ZBB8 358 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 FAM86B1E9PN63 330 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 FAM86B2P0C5J1 330 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 VCAM1P19320 739 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 DLK2Q6UY11 383 aa15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 PRPF38AQ8NAV1 312 aaKnown RBP15.41■□□□□ 0.06
SPTBN1-205ENST00000496323 KLRG1Q96E93 195 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms