RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 PDHBP11177 359 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 SDSP20132 328 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 DNAJB2P25686 324 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 ALDH5A1P51649 535 aaPredicted RBP12.79□□□□□ -0.36
RNF220-217ENST00000496262 PPIGQ13427 754 aaKnown RBP eCLIP12.79□□□□□ -0.36
RNF220-217ENST00000496262 ITGA7Q13683 1181 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 USH1GQ495M9 461 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 CWC27Q6UX04 472 aaKnown RBP12.79□□□□□ -0.36
RNF220-217ENST00000496262 BTNL9Q6UXG8 535 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 C16orf59Q7L2K0 433 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 CHD1LQ86WJ1 897 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 TMEM199Q8N511 208 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 TRPV6Q9H1D0 765 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 CPVLQ9H3G5 476 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 VTA1Q9NP79 307 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 DIAPH3Q9NSV4 1193 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 TCP11L1Q9NUJ3 509 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 ADD3Q9UEY8 706 aaKnown RBP12.79□□□□□ -0.36
RNF220-217ENST00000496262 ZMYM6O95789 1325 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 UMODL1Q5DID0 1318 aa12.79□□□□□ -0.36
RNF220-217ENST00000496262 CDH23Q9H251 3354 aa12.78□□□□□ -0.36
RNF220-217ENST00000496262 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.78□□□□□ -0.36
RNF220-217ENST00000496262 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.78□□□□□ -0.36
RNF220-217ENST00000496262 GRXCR1A8MXD5 290 aa12.78□□□□□ -0.36
RNF220-217ENST00000496262 ZNF213O14771 459 aa12.78□□□□□ -0.36
RNF220-217ENST00000496262 IGHDP01880 384 aa12.78□□□□□ -0.36
RNF220-217ENST00000496262 MFAP1P55081 439 aaKnown RBP12.78□□□□□ -0.36
RNF220-217ENST00000496262 ZNF543Q08ER8 600 aa12.78□□□□□ -0.36
RNF220-217ENST00000496262 GSE1Q14687 1217 aa12.78□□□□□ -0.36
RNF220-217ENST00000496262 IQSEC1Q6DN90 963 aa12.78□□□□□ -0.36
RNF220-217ENST00000496262 RNF207Q6ZRF8 634 aa12.78□□□□□ -0.36
RNF220-217ENST00000496262 PLEKHM2Q8IWE5 1019 aa12.78□□□□□ -0.36
RNF220-217ENST00000496262 SMC5Q8IY18 1101 aa12.78□□□□□ -0.36
RNF220-217ENST00000496262 IL27Q8NEV9 243 aa12.78□□□□□ -0.36
RNF220-217ENST00000496262 ESR2Q92731 530 aa12.78□□□□□ -0.36
RNF220-217ENST00000496262 HIPK3Q9H422 1215 aa12.78□□□□□ -0.36
RNF220-217ENST00000496262 RNF41Q9H4P4 317 aaPredicted RBP12.78□□□□□ -0.36
RNF220-217ENST00000496262 B4GALT4O60513 344 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 KDM4AO75164 1064 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 CABYRO75952 493 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 CD4P01730 458 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 MYL3P08590 195 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 PBX2P40425 430 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 CCL23P55773 120 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 NKX3-2P78367 333 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 CACNB1Q02641 598 aaPredicted RBP12.77□□□□□ -0.37
RNF220-217ENST00000496262 NUCB1Q02818 461 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 PDE4DQ08499 809 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 GRIN2CQ14957 1233 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 TMEM240Q5SV17 173 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 PSRC1Q6PGN9 363 aaPredicted RBP12.77□□□□□ -0.37
RNF220-217ENST00000496262 ZNF365Q70YC5 407 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 PPP1R13LQ8WUF5 828 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 CLEC4DQ8WXI8 215 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 TIFAQ96CG3 184 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 COL25A1Q9BXS0 654 aaPredicted RBP12.77□□□□□ -0.37
RNF220-217ENST00000496262 WDR11Q9BZH6 1224 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 UBA5Q9GZZ9 404 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 GRIN2DO15399 1336 aa12.77□□□□□ -0.37
RNF220-217ENST00000496262 LCTP09848 1927 aa12.76□□□□□ -0.37
RNF220-217ENST00000496262 B4E1Z4 1266 aa12.76□□□□□ -0.37
RNF220-217ENST00000496262 DHX16O60231 1041 aaKnown RBP12.76□□□□□ -0.37
RNF220-217ENST00000496262 PCP11498 1178 aaKnown RBP12.76□□□□□ -0.37
RNF220-217ENST00000496262 CHMP4BP1P59074 171 aa12.76□□□□□ -0.37
RNF220-217ENST00000496262 RPS6P62753 249 aaKnown RBP12.76□□□□□ -0.37
RNF220-217ENST00000496262 DUSP28Q4G0W2 176 aa12.76□□□□□ -0.37
RNF220-217ENST00000496262 TICAM2Q86XR7 235 aa12.76□□□□□ -0.37
RNF220-217ENST00000496262 SLC43A3Q8NBI5 491 aa12.76□□□□□ -0.37
RNF220-217ENST00000496262 OR6J1Q8NGC5 347 aa12.76□□□□□ -0.37
RNF220-217ENST00000496262 MORC4Q8TE76 937 aa12.76□□□□□ -0.37
RNF220-217ENST00000496262 TTC14Q96N46 770 aa12.76□□□□□ -0.37
RNF220-217ENST00000496262 PBX4Q9BYU1 374 aa12.76□□□□□ -0.37
RNF220-217ENST00000496262 ZNF576Q9H609 170 aa12.76□□□□□ -0.37
RNF220-217ENST00000496262 TMEM265A0A087WTH1 108 aa12.75□□□□□ -0.37
RNF220-217ENST00000496262 SNHG28P0DPA3 235 aa12.75□□□□□ -0.37
RNF220-217ENST00000496262 PPP2R5BQ15173 497 aa12.75□□□□□ -0.37
RNF220-217ENST00000496262 FAM47CQ5HY64 1035 aa12.75□□□□□ -0.37
RNF220-217ENST00000496262 OTOP2Q7RTS6 562 aa12.75□□□□□ -0.37
RNF220-217ENST00000496262 PNMA1Q8ND90 353 aa12.75□□□□□ -0.37
RNF220-217ENST00000496262 PRUNE2Q8WUY3 3088 aa12.75□□□□□ -0.37
RNF220-217ENST00000496262 COPS5Q92905 334 aa12.75□□□□□ -0.37
RNF220-217ENST00000496262 MPHOSPH6Q99547 160 aaKnown RBP12.75□□□□□ -0.37
RNF220-217ENST00000496262 NOC4LQ9BVI4 516 aaKnown RBP12.75□□□□□ -0.37
RNF220-217ENST00000496262 KAT14Q9H8E8 782 aa12.75□□□□□ -0.37
RNF220-217ENST00000496262 IL23AQ9NPF7 189 aa12.75□□□□□ -0.37
RNF220-217ENST00000496262 GPHNQ9NQX3 736 aaPredicted RBP12.75□□□□□ -0.37
RNF220-217ENST00000496262 TRMT13Q9NUP7 481 aaKnown RBP12.75□□□□□ -0.37
RNF220-217ENST00000496262 CXXC1Q9P0U4 656 aaPredicted RBP12.75□□□□□ -0.37
RNF220-217ENST00000496262 Q9Y3F1 56 aa12.75□□□□□ -0.37
RNF220-217ENST00000496262 WDR19Q8NEZ3 1342 aa12.74□□□□□ -0.37
RNF220-217ENST00000496262 FGBP02675 491 aa12.74□□□□□ -0.37
RNF220-217ENST00000496262 CYP2C9P11712 490 aa12.74□□□□□ -0.37
RNF220-217ENST00000496262 CPT1AP50416 773 aa12.74□□□□□ -0.37
RNF220-217ENST00000496262 AAMPQ13685 434 aa12.74□□□□□ -0.37
RNF220-217ENST00000496262 CDC37Q16543 378 aaPredicted RBP12.74□□□□□ -0.37
RNF220-217ENST00000496262 IMMTQ16891 758 aaKnown RBP12.74□□□□□ -0.37
RNF220-217ENST00000496262 GPATCH4Q5T3I0 446 aaKnown RBP12.74□□□□□ -0.37
RNF220-217ENST00000496262 IQCA1Q86XH1 822 aa12.74□□□□□ -0.37
RNF220-217ENST00000496262 DGKHQ86XP1 1220 aa12.74□□□□□ -0.37
RNF220-217ENST00000496262 PPM1EQ8WY54 764 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms