RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 MCM4P33991 863 aa5.99□□□□□ -1.45
CLK1-214ENST00000496205 GJA9P57773 515 aa5.99□□□□□ -1.45
CLK1-214ENST00000496205 ZNF445P59923 1031 aa5.99□□□□□ -1.45
CLK1-214ENST00000496205 NAALADL2Q58DX5 795 aa5.99□□□□□ -1.45
CLK1-214ENST00000496205 CWF19L1Q69YN2 538 aaKnown RBP5.99□□□□□ -1.45
CLK1-214ENST00000496205 CCDC144CPQ8IYA2 1237 aa5.99□□□□□ -1.45
CLK1-214ENST00000496205 NLGN2Q8NFZ4 835 aa5.99□□□□□ -1.45
CLK1-214ENST00000496205 ALG3Q92685 438 aa5.99□□□□□ -1.45
CLK1-214ENST00000496205 BRF1Q92994 677 aa5.99□□□□□ -1.45
CLK1-214ENST00000496205 FCRL3Q96P31 734 aaPredicted RBP5.99□□□□□ -1.45
CLK1-214ENST00000496205 BCL11AQ9H165 835 aa5.99□□□□□ -1.45
CLK1-214ENST00000496205 ACBD3Q9H3P7 528 aa5.99□□□□□ -1.45
CLK1-214ENST00000496205 DBR1Q9UK59 544 aaKnown RBP5.99□□□□□ -1.45
CLK1-214ENST00000496205 FSHBP01225 129 aa5.98□□□□□ -1.45
CLK1-214ENST00000496205 GLI4P10075 376 aa5.98□□□□□ -1.45
CLK1-214ENST00000496205 ZC3H6P61129 1189 aaKnown RBP5.98□□□□□ -1.45
CLK1-214ENST00000496205 LRRFIP1Q32MZ4 808 aaKnown RBP5.98□□□□□ -1.45
CLK1-214ENST00000496205 TDRD10Q5VZ19 366 aaKnown RBP5.98□□□□□ -1.45
CLK1-214ENST00000496205 DCAF15Q66K64 600 aa5.98□□□□□ -1.45
CLK1-214ENST00000496205 CPZQ66K79 652 aa5.98□□□□□ -1.45
CLK1-214ENST00000496205 CYP2R1Q6VVX0 501 aa5.98□□□□□ -1.45
CLK1-214ENST00000496205 ZNF761Q86XN6 746 aaPredicted RBP5.98□□□□□ -1.45
CLK1-214ENST00000496205 FBLN5Q9UBX5 448 aa5.98□□□□□ -1.45
CLK1-214ENST00000496205 DDX41Q9UJV9 622 aaKnown RBP5.98□□□□□ -1.45
CLK1-214ENST00000496205 LOC105371045A0A1W2PR82 267 aa5.97□□□□□ -1.45
CLK1-214ENST00000496205 C1QTNF3-AMACRE9PGA6 284 aa5.97□□□□□ -1.45
CLK1-214ENST00000496205 IFNGR1P15260 489 aa5.97□□□□□ -1.45
CLK1-214ENST00000496205 SARSP49591 514 aaKnown RBP5.97□□□□□ -1.45
CLK1-214ENST00000496205 APOBRQ0VD83 1088 aa5.97□□□□□ -1.45
CLK1-214ENST00000496205 PPFIBP1Q86W92 1011 aa5.97□□□□□ -1.45
CLK1-214ENST00000496205 SMARCC2Q8TAQ2 1214 aa5.97□□□□□ -1.45
CLK1-214ENST00000496205 C8orf49Q96NF6 230 aa5.97□□□□□ -1.45
CLK1-214ENST00000496205 PTCHD1Q96NR3 888 aa5.97□□□□□ -1.45
CLK1-214ENST00000496205 C1QTNF3Q9BXJ4 246 aa5.97□□□□□ -1.45
CLK1-214ENST00000496205 TGIF2Q9GZN2 237 aa5.97□□□□□ -1.45
CLK1-214ENST00000496205 ZNF20P17024 532 aa5.96□□□□□ -1.46
CLK1-214ENST00000496205 ZNF165P49910 485 aa5.96□□□□□ -1.46
CLK1-214ENST00000496205 CORO7P57737 925 aa5.96□□□□□ -1.46
CLK1-214ENST00000496205 ANKRD39Q53RE8 183 aa5.96□□□□□ -1.46
CLK1-214ENST00000496205 AXDND1Q5T1B0 1012 aaPredicted RBP5.96□□□□□ -1.46
CLK1-214ENST00000496205 INTS3Q68E01 1043 aaKnown RBP5.96□□□□□ -1.46
CLK1-214ENST00000496205 SLITRK4Q8IW52 837 aa5.96□□□□□ -1.46
CLK1-214ENST00000496205 DHRS1Q96LJ7 313 aa5.96□□□□□ -1.46
CLK1-214ENST00000496205 GP6Q9HCN6 339 aa5.96□□□□□ -1.46
CLK1-214ENST00000496205 GGT7Q9UJ14 662 aa5.96□□□□□ -1.46
CLK1-214ENST00000496205 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.96□□□□□ -1.46
CLK1-214ENST00000496205 PPP1R11O60927 126 aaPredicted RBP5.95□□□□□ -1.46
CLK1-214ENST00000496205 L1CAMP32004 1257 aa5.95□□□□□ -1.46
CLK1-214ENST00000496205 NOP2P46087 812 aaKnown RBP5.95□□□□□ -1.46
CLK1-214ENST00000496205 PMS1P54277 932 aaKnown RBP5.95□□□□□ -1.46
CLK1-214ENST00000496205 TBC1D10BQ4KMP7 808 aaPredicted RBP5.95□□□□□ -1.46
CLK1-214ENST00000496205 NOL9Q5SY16 702 aaKnown RBP5.95□□□□□ -1.46
CLK1-214ENST00000496205 USP48Q86UV5 1035 aa5.95□□□□□ -1.46
CLK1-214ENST00000496205 FIBCD1Q8N539 461 aa5.95□□□□□ -1.46
CLK1-214ENST00000496205 TSPAN17Q96FV3 270 aa5.95□□□□□ -1.46
CLK1-214ENST00000496205 LOXL4Q96JB6 756 aa5.95□□□□□ -1.46
CLK1-214ENST00000496205 SCAND2PQ9GZW5 306 aaPredicted RBP5.95□□□□□ -1.46
CLK1-214ENST00000496205 USP35Q9P2H5 1018 aa5.95□□□□□ -1.46
CLK1-214ENST00000496205 ITGAEP38570 1179 aa5.94□□□□□ -1.46
CLK1-214ENST00000496205 HS2ST1Q7LGA3 356 aa5.94□□□□□ -1.46
CLK1-214ENST00000496205 ADAMTS17Q8TE56 1095 aa5.94□□□□□ -1.46
CLK1-214ENST00000496205 NKD1Q969G9 470 aa5.94□□□□□ -1.46
CLK1-214ENST00000496205 ZBTB8AQ96BR9 441 aa5.94□□□□□ -1.46
CLK1-214ENST00000496205 SAMD11Q96NU1 681 aa5.94□□□□□ -1.46
CLK1-214ENST00000496205 SORCS2Q96PQ0 1159 aa5.94□□□□□ -1.46
CLK1-214ENST00000496205 SYT3Q9BQG1 590 aa5.94□□□□□ -1.46
CLK1-214ENST00000496205 SSBP3Q9BWW4 388 aaPredicted RBP5.94□□□□□ -1.46
CLK1-214ENST00000496205 CCSER2Q9H7U1 834 aa5.94□□□□□ -1.46
CLK1-214ENST00000496205 NTMQ9P121 344 aa5.94□□□□□ -1.46
CLK1-214ENST00000496205 ZNF451Q9Y4E5 1061 aa5.94□□□□□ -1.46
CLK1-214ENST00000496205 FHOD1Q9Y613 1164 aa5.94□□□□□ -1.46
CLK1-214ENST00000496205 TBC1D8O95759 1140 aa5.93□□□□□ -1.46
CLK1-214ENST00000496205 PLATP00750 562 aa5.93□□□□□ -1.46
CLK1-214ENST00000496205 TP53P04637 393 aaPredicted RBP5.93□□□□□ -1.46
CLK1-214ENST00000496205 CD3EP07766 207 aa5.93□□□□□ -1.46
CLK1-214ENST00000496205 CACNB2Q08289 660 aaPredicted RBP5.93□□□□□ -1.46
CLK1-214ENST00000496205 SMAD4Q13485 552 aaKnown RBP5.93□□□□□ -1.46
CLK1-214ENST00000496205 CPA5Q8WXQ8 436 aa5.93□□□□□ -1.46
CLK1-214ENST00000496205 DDX11Q96FC9 970 aa5.93□□□□□ -1.46
CLK1-214ENST00000496205 MCMBPQ9BTE3 642 aa5.93□□□□□ -1.46
CLK1-214ENST00000496205 CAPN10Q9HC96 672 aa5.93□□□□□ -1.46
CLK1-214ENST00000496205 FAM86C1Q9NVL1 165 aa5.93□□□□□ -1.46
CLK1-214ENST00000496205 SRRDQ9UH36 339 aa5.93□□□□□ -1.46
CLK1-214ENST00000496205 OVOL3O00110 214 aa5.92□□□□□ -1.46
CLK1-214ENST00000496205 CD247P20963 164 aa5.92□□□□□ -1.46
CLK1-214ENST00000496205 ZYXQ15942 572 aaKnown RBP5.92□□□□□ -1.46
CLK1-214ENST00000496205 Q8N1X5 172 aa5.92□□□□□ -1.46
CLK1-214ENST00000496205 TTC9BQ8N6N2 239 aa5.92□□□□□ -1.46
CLK1-214ENST00000496205 SREK1Q8WXA9 508 aaKnown RBP5.92□□□□□ -1.46
CLK1-214ENST00000496205 NT5C1AQ9BXI3 368 aa5.92□□□□□ -1.46
CLK1-214ENST00000496205 NOL6Q9H6R4 1146 aaKnown RBP5.92□□□□□ -1.46
CLK1-214ENST00000496205 RWDD3Q9Y3V2 267 aa5.92□□□□□ -1.46
CLK1-214ENST00000496205 TTLL7Q6ZT98 887 aa5.91□□□□□ -1.46
CLK1-214ENST00000496205 ZNF654Q8IZM8 581 aa5.91□□□□□ -1.46
CLK1-214ENST00000496205 LINC00482Q8N8I6 264 aa5.91□□□□□ -1.46
CLK1-214ENST00000496205 ZDHHC15Q96MV8 337 aa5.91□□□□□ -1.46
CLK1-214ENST00000496205 SLPIP03973 132 aa5.9□□□□□ -1.46
CLK1-214ENST00000496205 C6P13671 934 aa5.9□□□□□ -1.46
CLK1-214ENST00000496205 POU4F1Q01851 419 aa5.9□□□□□ -1.46
CLK1-214ENST00000496205 PAK2Q13177 524 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms