RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 RANBP17Q9H2T7 1088 aaKnown RBP12.23□□□□□ -0.45
ECHDC3-204ENST00000495787 CLSTN2Q9H4D0 955 aa12.23□□□□□ -0.45
ECHDC3-204ENST00000495787 PSTPIP2Q9H939 334 aa12.23□□□□□ -0.45
ECHDC3-204ENST00000495787 BIN2Q9UBW5 565 aaPredicted RBP12.23□□□□□ -0.45
ECHDC3-204ENST00000495787 FBXO2Q9UK22 296 aaPredicted RBP12.23□□□□□ -0.45
ECHDC3-204ENST00000495787 OTOFQ9HC10 1997 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 A0A1B0GVL5 298 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 FSD2A1L4K1 749 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 GOLGA6L3A6NEY3 463 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 C19orf81C9J6K1 198 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 WNT7AO00755 349 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 EN2P19622 333 aaPredicted RBP12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 BACE1P56817 501 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 ATP2C1P98194 919 aaPredicted RBP12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 SPP2Q13103 211 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 ORC2Q13416 577 aaPredicted RBP12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 SNW1Q13573 536 aaKnown RBP12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 INF2Q27J81 1249 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 JAKMIP3Q5VZ66 844 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 FMR1NBQ8N0W7 255 aaPredicted RBP12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 CD99L2Q8TCZ2 262 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 C12orf42Q96LP6 360 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 TMEM106CQ9BVX2 250 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 EFCC1Q9HA90 598 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 FZD1Q9UP38 647 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 PARP14Q460N5 1801 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 BRCA2P51587 3418 aa12.22□□□□□ -0.45
ECHDC3-204ENST00000495787 CTAGE5O15320 804 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 KINO60870 393 aaKnown RBP12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 PFKFB1P16118 471 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 MCM7P33993 719 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 IREB2P48200 963 aaKnown RBP12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 NDUFA8P51970 172 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 SNAP25P60880 206 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 PTGDRQ13258 359 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 CRHR2Q13324 411 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 MTMR2Q13614 643 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 ARL6IP4Q66PJ3 421 aaKnown RBP12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 SHC4Q6S5L8 630 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 NEK8Q86SG6 692 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 C4orf32Q8N8J7 132 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 PRPF38AQ8NAV1 312 aaKnown RBP12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 KIFC2Q96AC6 838 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 CLIC6Q96NY7 704 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 SLF1Q9BQI6 1058 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 TNMDQ9H2S6 317 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 TMEM260Q9NX78 707 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 FAM13BQ9NYF5 915 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 HPSEQ9Y251 543 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 ZHX2Q9Y6X8 837 aa12.21□□□□□ -0.45
ECHDC3-204ENST00000495787 MYH7BA7E2Y1 1941 aa12.21□□□□□ -0.46
ECHDC3-204ENST00000495787 SMCHD1A6NHR9 2005 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 LAD1O00515 517 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 FDX1P10109 184 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 VCAM1P19320 739 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 SP3Q02447 781 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 AP3B2Q13367 1082 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 UBE2SQ16763 222 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 USH1GQ495M9 461 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 L1TD1Q5T7N2 865 aaKnown RBP12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 RBM43Q6ZSC3 357 aaKnown RBP12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 GAS2L3Q86XJ1 694 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 TBCKQ8TEA7 893 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 CLMNQ96JQ2 1002 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 TIGD1Q96MW7 591 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 FBXO28Q9NVF7 368 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 COLQQ9Y215 455 aaPredicted RBP12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 AFG3L2Q9Y4W6 797 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 CSADQ9Y600 493 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 SNCAIPQ9Y6H5 919 aa12.2□□□□□ -0.46
ECHDC3-204ENST00000495787 PTPRFP10586 1907 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 ABCB11O95342 1321 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 ZNF202O95125 648 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 FOSP01100 380 aaPredicted RBP12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 PRPHP41219 470 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 SYKP43405 635 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 VGLL4Q14135 290 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 ARHGEF6Q15052 776 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 CAMK4Q16566 473 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 SH3D19Q5HYK7 790 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 CCDC174Q6PII3 467 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 ZNF333Q96JL9 665 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 NAP1L4Q99733 375 aaKnown RBP12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 TANGO6Q9C0B7 1094 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 CSRNP2Q9H175 543 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 TSPY26PQ9H489 355 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 RPAP3Q9H6T3 665 aaPredicted RBP12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 PNMA2Q9UL42 364 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 PPP1R9AQ9ULJ8 1098 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 MRPL11Q9Y3B7 192 aaKnown RBP12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 MRVI1Q9Y6F6 885 aa12.19□□□□□ -0.46
ECHDC3-204ENST00000495787 RLFQ13129 1914 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 TESPA1A2RU30 521 aaPredicted RBP12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 USP17L15C9J2P7 530 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 USP17L13C9JLJ4 530 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 USP17L11C9JVI0 530 aa12.18□□□□□ -0.46
ECHDC3-204ENST00000495787 USP17L18D6R9N7 530 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms