RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 PSRC1Q6PGN9 363 aaPredicted RBP25.98■■□□□ 1.75
HDDC3-203ENST00000494993 TBC1D10CQ8IV04 446 aa25.98■■□□□ 1.75
HDDC3-203ENST00000494993 SMC5Q8IY18 1101 aa25.98■■□□□ 1.75
HDDC3-203ENST00000494993 PTPDC1A2A3K4 754 aa25.97■■□□□ 1.75
HDDC3-203ENST00000494993 ACRP10323 421 aa25.97■■□□□ 1.75
HDDC3-203ENST00000494993 MFAP1P55081 439 aaKnown RBP25.97■■□□□ 1.75
HDDC3-203ENST00000494993 ZNF543Q08ER8 600 aa25.97■■□□□ 1.75
HDDC3-203ENST00000494993 DUSP28Q4G0W2 176 aa25.97■■□□□ 1.75
HDDC3-203ENST00000494993 ZNF365Q70YC5 407 aa25.97■■□□□ 1.75
HDDC3-203ENST00000494993 PNMA2Q9UL42 364 aa25.97■■□□□ 1.75
HDDC3-203ENST00000494993 SNHG28P0DPA3 235 aa25.96■■□□□ 1.75
HDDC3-203ENST00000494993 SDSP20132 328 aa25.96■■□□□ 1.75
HDDC3-203ENST00000494993 SLC30A10Q6XR72 485 aa25.96■■□□□ 1.75
HDDC3-203ENST00000494993 CLEC4DQ8WXI8 215 aa25.96■■□□□ 1.75
HDDC3-203ENST00000494993 TIFAQ96CG3 184 aa25.96■■□□□ 1.75
HDDC3-203ENST00000494993 HIPK3Q9H422 1215 aa25.96■■□□□ 1.75
HDDC3-203ENST00000494993 RNF41Q9H4P4 317 aaPredicted RBP25.96■■□□□ 1.75
HDDC3-203ENST00000494993 IL23AQ9NPF7 189 aa25.96■■□□□ 1.75
HDDC3-203ENST00000494993 SCN10AQ9Y5Y9 1956 aa25.96■■□□□ 1.75
HDDC3-203ENST00000494993 WDR19Q8NEZ3 1342 aa25.95■■□□□ 1.75
HDDC3-203ENST00000494993 GRIN2CQ14957 1233 aa25.95■■□□□ 1.74
HDDC3-203ENST00000494993 B4GALNT3Q6L9W6 998 aa25.95■■□□□ 1.74
HDDC3-203ENST00000494993 RWDD1Q9H446 243 aaPredicted RBP25.95■■□□□ 1.74
HDDC3-203ENST00000494993 NEDD4P46934 1319 aa25.94■■□□□ 1.74
HDDC3-203ENST00000494993 UMODL1Q5DID0 1318 aa25.94■■□□□ 1.74
HDDC3-203ENST00000494993 RBM47A0AV96 593 aaKnown RBP25.94■■□□□ 1.74
HDDC3-203ENST00000494993 CALML3P27482 149 aa25.94■■□□□ 1.74
HDDC3-203ENST00000494993 PSMC6P62333 389 aa25.94■■□□□ 1.74
HDDC3-203ENST00000494993 RNF207Q6ZRF8 634 aa25.94■■□□□ 1.74
HDDC3-203ENST00000494993 PLEKHM2Q8IWE5 1019 aa25.94■■□□□ 1.74
HDDC3-203ENST00000494993 ESR2Q92731 530 aa25.94■■□□□ 1.74
HDDC3-203ENST00000494993 WDR11Q9BZH6 1224 aa25.94■■□□□ 1.74
HDDC3-203ENST00000494993 ZNF576Q9H609 170 aa25.94■■□□□ 1.74
HDDC3-203ENST00000494993 GRXCR1A8MXD5 290 aa25.93■■□□□ 1.74
HDDC3-203ENST00000494993 B4GALT4O60513 344 aa25.93■■□□□ 1.74
HDDC3-203ENST00000494993 CHD1LQ86WJ1 897 aa25.93■■□□□ 1.74
HDDC3-203ENST00000494993 PBX4Q9BYU1 374 aa25.93■■□□□ 1.74
HDDC3-203ENST00000494993 TRPV6Q9H1D0 765 aa25.93■■□□□ 1.74
HDDC3-203ENST00000494993 OSBPL3Q9H4L5 887 aa25.93■■□□□ 1.74
HDDC3-203ENST00000494993 KIAA1217Q5T5P2 1943 aa25.92■■□□□ 1.74
HDDC3-203ENST00000494993 SCN5AQ14524 2016 aa25.92■■□□□ 1.74
HDDC3-203ENST00000494993 ZNF213O14771 459 aa25.92■■□□□ 1.74
HDDC3-203ENST00000494993 RPS6P62753 249 aaKnown RBP25.92■■□□□ 1.74
HDDC3-203ENST00000494993 GPATCH4Q5T3I0 446 aaKnown RBP25.92■■□□□ 1.74
HDDC3-203ENST00000494993 HERVK_113Q902F9 699 aa25.92■■□□□ 1.74
HDDC3-203ENST00000494993 ZKSCAN3Q9BRR0 538 aa25.92■■□□□ 1.74
HDDC3-203ENST00000494993 NOC4LQ9BVI4 516 aaKnown RBP25.92■■□□□ 1.74
HDDC3-203ENST00000494993 POLR3EQ9NVU0 708 aa25.92■■□□□ 1.74
HDDC3-203ENST00000494993 VCANP13611 3396 aa25.92■■□□□ 1.74
HDDC3-203ENST00000494993 PBX2P40425 430 aa25.91■■□□□ 1.74
HDDC3-203ENST00000494993 NT5C2P49902 561 aa25.91■■□□□ 1.74
HDDC3-203ENST00000494993 DGKHQ86XP1 1220 aa25.91■■□□□ 1.74
HDDC3-203ENST00000494993 MTIF3Q9H2K0 278 aaKnown RBP25.91■■□□□ 1.74
HDDC3-203ENST00000494993 FGBP02675 491 aa25.9■■□□□ 1.74
HDDC3-203ENST00000494993 EDNRBP24530 442 aa25.9■■□□□ 1.74
HDDC3-203ENST00000494993 CPT1AP50416 773 aa25.9■■□□□ 1.74
HDDC3-203ENST00000494993 CCL23P55773 120 aa25.9■■□□□ 1.74
HDDC3-203ENST00000494993 NUCB1Q02818 461 aa25.9■■□□□ 1.74
HDDC3-203ENST00000494993 PDE4DQ08499 809 aa25.9■■□□□ 1.74
HDDC3-203ENST00000494993 DNERQ8NFT8 737 aa25.9■■□□□ 1.74
HDDC3-203ENST00000494993 OR6J1Q8NGC5 347 aa25.9■■□□□ 1.74
HDDC3-203ENST00000494993 MPHOSPH6Q99547 160 aaKnown RBP25.9■■□□□ 1.74
HDDC3-203ENST00000494993 ALDH8A1Q9H2A2 487 aaPredicted RBP25.9■■□□□ 1.74
HDDC3-203ENST00000494993 IGHDP01880 384 aa25.89■■□□□ 1.74
HDDC3-203ENST00000494993 GOLGA8HP0CJ92 632 aa25.89■■□□□ 1.74
HDDC3-203ENST00000494993 PURAQ00577 322 aaKnown RBP25.89■■□□□ 1.74
HDDC3-203ENST00000494993 CWC27Q6UX04 472 aaKnown RBP25.89■■□□□ 1.74
HDDC3-203ENST00000494993 WNT8AQ9H1J5 351 aa25.89■■□□□ 1.74
HDDC3-203ENST00000494993 DIAPH3Q9NSV4 1193 aa25.89■■□□□ 1.74
HDDC3-203ENST00000494993 CXXC1Q9P0U4 656 aaPredicted RBP25.89■■□□□ 1.74
HDDC3-203ENST00000494993 TANC1Q9C0D5 1861 aa25.88■■□□□ 1.73
HDDC3-203ENST00000494993 NKRFO15226 690 aaKnown RBP eCLIP25.88■■□□□ 1.73
HDDC3-203ENST00000494993 KDM4AO75164 1064 aa25.88■■□□□ 1.73
HDDC3-203ENST00000494993 MYL3P08590 195 aa25.88■■□□□ 1.73
HDDC3-203ENST00000494993 PPP2R5BQ15173 497 aa25.88■■□□□ 1.73
HDDC3-203ENST00000494993 USH1GQ495M9 461 aa25.88■■□□□ 1.73
HDDC3-203ENST00000494993 CCDC178Q5BJE1 867 aa25.88■■□□□ 1.73
HDDC3-203ENST00000494993 IQCA1Q86XH1 822 aa25.88■■□□□ 1.73
HDDC3-203ENST00000494993 PNMA1Q8ND90 353 aa25.88■■□□□ 1.73
HDDC3-203ENST00000494993 UBA5Q9GZZ9 404 aa25.88■■□□□ 1.73
HDDC3-203ENST00000494993 CPVLQ9H3G5 476 aa25.88■■□□□ 1.73
HDDC3-203ENST00000494993 RAB30Q15771 203 aa25.87■■□□□ 1.73
HDDC3-203ENST00000494993 OTOP2Q7RTS6 562 aa25.87■■□□□ 1.73
HDDC3-203ENST00000494993 RGS22Q8NE09 1264 aa25.87■■□□□ 1.73
HDDC3-203ENST00000494993 SCFD2Q8WU76 684 aa25.87■■□□□ 1.73
HDDC3-203ENST00000494993 MTG1Q9BT17 334 aaPredicted RBP25.87■■□□□ 1.73
HDDC3-203ENST00000494993 CHD9Q3L8U1 2897 aa25.87■■□□□ 1.73
HDDC3-203ENST00000494993 TRIP12Q14669 1992 aaPredicted RBP25.87■■□□□ 1.73
HDDC3-203ENST00000494993 RAD50Q92878 1312 aa25.87■■□□□ 1.73
HDDC3-203ENST00000494993 B4DLN1 442 aa25.86■■□□□ 1.73
HDDC3-203ENST00000494993 HIP1O00291 1037 aa25.86■■□□□ 1.73
HDDC3-203ENST00000494993 SUPT20HL2P0C7V6 817 aa25.86■■□□□ 1.73
HDDC3-203ENST00000494993 MRPL12P52815 198 aaKnown RBP25.86■■□□□ 1.73
HDDC3-203ENST00000494993 BRDTQ58F21 947 aaPredicted RBP25.86■■□□□ 1.73
HDDC3-203ENST00000494993 KAT14Q9H8E8 782 aa25.86■■□□□ 1.73
HDDC3-203ENST00000494993 GPHNQ9NQX3 736 aaPredicted RBP25.86■■□□□ 1.73
HDDC3-203ENST00000494993 TRMT13Q9NUP7 481 aaKnown RBP25.86■■□□□ 1.73
HDDC3-203ENST00000494993 MSRAQ9UJ68 235 aa25.86■■□□□ 1.73
HDDC3-203ENST00000494993 TNKSO95271 1327 aa25.86■■□□□ 1.73
HDDC3-203ENST00000494993 MYH7BA7E2Y1 1941 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms