RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 FAM153BP0C7A2 387 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 CTSKP43235 329 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 LINC00310P59036 64 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 TEKQ02763 1124 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 LONRF2Q1L5Z9 754 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 ZNF385BQ569K4 471 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 SDE2Q6IQ49 451 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 ZSWIM2Q8NEG5 633 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 BTN2A2Q8WVV5 523 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 MRGPRX3Q96LB0 322 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 AARSD1Q9BTE6 412 aaKnown RBP4.05□□□□□ -1.76
LRIF1-203ENST00000494675 IRF2BPLQ9H1B7 796 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 ARHGEF4Q9NR80 690 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 TCFL5Q9UL49 500 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 RFXAPO00287 272 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 SYPP08247 313 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 ZGLP1P0C6A0 271 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 VAV1P15498 845 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 BMP8BP34820 402 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 GRIA2P42262 883 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 KCNJ6P48051 423 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 NR0B2Q15466 257 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 YOD1Q5VVQ6 348 aaPredicted RBP4.05□□□□□ -1.76
LRIF1-203ENST00000494675 GTF2IRD2BQ6EKJ0 949 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 ZNF605Q86T29 641 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 GTF2IRD2Q86UP8 949 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 TMEM151BQ8IW70 566 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 NLGN1Q8N2Q7 840 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 ANKS4BQ8N8V4 417 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 JMYQ8N9B5 988 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 LINC00116Q8NCU8 138 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 APPBP2Q92624 585 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 IER2Q9BTL4 223 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 FOXP3Q9BZS1 431 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 KANSL2Q9H9L4 492 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 FANCLQ9NW38 375 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 GPR160Q9UJ42 338 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 CNOT6Q9ULM6 557 aaKnown RBP4.05□□□□□ -1.76
LRIF1-203ENST00000494675 YBX2Q9Y2T7 364 aaKnown RBP4.05□□□□□ -1.76
LRIF1-203ENST00000494675 PTCH2Q9Y6C5 1203 aa4.05□□□□□ -1.76
LRIF1-203ENST00000494675 ESYT3A0FGR9 886 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 STXBP3O00186 592 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 PRODHO43272 600 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 FKTNO75072 461 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 CDC45O75419 566 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 CLSTN1O94985 981 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 SNRPB2P08579 225 aaKnown RBP4.04□□□□□ -1.76
LRIF1-203ENST00000494675 HOXC12P31275 282 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 DLG4P78352 724 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 SQSTM1Q13501 440 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 ZC3H12BQ5HYM0 836 aaKnown RBP4.04□□□□□ -1.76
LRIF1-203ENST00000494675 NSMFQ6X4W1 530 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 HOMER1Q86YM7 354 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 SCUBE1Q8IWY4 988 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 INTS4Q96HW7 963 aaKnown RBP4.04□□□□□ -1.76
LRIF1-203ENST00000494675 CCDC140Q96MF4 163 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 MCOLN1Q9GZU1 580 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 NKX2-4Q9H2Z4 354 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 ZCCHC4Q9H5U6 513 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 C19orf44Q9H6X5 657 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 ZNF552Q9H707 407 aaPredicted RBP4.04□□□□□ -1.76
LRIF1-203ENST00000494675 CYP26B1Q9NR63 512 aa4.04□□□□□ -1.76
LRIF1-203ENST00000494675 TEX51A0A1B0GUA7 166 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 FOXD2O60548 495 aaPredicted RBP4.03□□□□□ -1.76
LRIF1-203ENST00000494675 GSTM1P09488 218 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 FGFR1P11362 822 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 PABPC1P11940 636 aaKnown RBP4.03□□□□□ -1.76
LRIF1-203ENST00000494675 HSD3B2P26439 372 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 RPL10P27635 214 aaKnown RBP4.03□□□□□ -1.76
LRIF1-203ENST00000494675 L1CAMP32004 1257 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 ECI1P42126 302 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 SEPHS1P49903 392 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 FAM209AQ5JX71 171 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 FCRL3Q96P31 734 aaPredicted RBP4.03□□□□□ -1.76
LRIF1-203ENST00000494675 CDADC1Q9BWV3 514 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 SP110Q9HB58 689 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 TMEM260Q9NX78 707 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 ZNF281Q9Y2X9 895 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 CADPSQ9ULU8 1353 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 TRBV23-1A0A0A0MS06 115 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 C2orf71A6NGG8 1288 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 ZNF205O95201 554 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 CPP00450 1065 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 IFNGR1P15260 489 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 SCRN1Q12765 414 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 SF1Q15637 639 aaKnown RBP4.03□□□□□ -1.76
LRIF1-203ENST00000494675 SLC14A2Q15849 920 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 FOXB2Q5VYV0 432 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 WAPLQ7Z5K2 1190 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 FAM177A1Q8N128 213 aaPredicted RBP4.03□□□□□ -1.76
LRIF1-203ENST00000494675 KCTD13Q8WZ19 329 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 DHRS4Q9BTZ2 278 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 SLC12A9Q9BXP2 914 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 PARD6AQ9NPB6 346 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 AP5S1Q9NUS5 200 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 BACE2Q9Y5Z0 518 aa4.03□□□□□ -1.76
LRIF1-203ENST00000494675 CCDC163A0A0D9SF12 145 aa4.02□□□□□ -1.77
LRIF1-203ENST00000494675 OR14I1A6ND48 311 aa4.02□□□□□ -1.77
LRIF1-203ENST00000494675 ENPP3O14638 875 aa4.02□□□□□ -1.77
LRIF1-203ENST00000494675 AURKAO14965 403 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms