RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 KRT23Q9C075 422 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 GPR108Q9NPR9 543 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 TRPV5Q9NQA5 729 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 ITGB1BP2Q9UKP3 347 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 ZNF232Q9UNY5 417 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 PHF8Q9UPP1 1060 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 CHD4Q14839 1912 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 MYH2Q9UKX2 1941 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 LGALS16A8MUM7 142 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 BTBD19C9JJ37 291 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 RNF225M0QZC1 329 aaPredicted RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 DTNBO60941 627 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 RARAP10276 462 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 ATP2A2P16615 1042 aaKnown RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 EEF1GP26641 437 aaKnown RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 EIF3BP55884 814 aaKnown RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 NLRP5P59047 1200 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 TAF7Q15545 349 aaPredicted RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 CCDC122Q5T0U0 273 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 KBTBD3Q8NAB2 608 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 STKLD1Q8NE28 680 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 NOC3LQ8WTT2 800 aaKnown RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 TEKT4Q8WW24 435 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 AIDAQ96BJ3 306 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 PBKQ96KB5 322 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 TMEM237Q96Q45 408 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 CENPHQ9H3R5 247 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 COPRSQ9NQ92 184 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 WDR37Q9Y2I8 494 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 DPPA5A6NC42 116 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 TMEM221A6NGB7 291 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 BTNL10A8MVZ5 291 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 CYP27B1O15528 508 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 STRNO43815 780 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 ECM2O94769 699 aaPredicted RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 FMNL1O95466 1100 aaPredicted RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 KRT14P02533 472 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 RPSAP08865 295 aaKnown RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 RCAN1P53805 252 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 ADAM9Q13443 819 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 TCP11X2Q5H9J9 407 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 PPP1R15BQ5SWA1 713 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 ACBD5Q5T8D3 534 aaPredicted RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 DAB2IPQ5VWQ8 1189 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 HIBCHQ6NVY1 386 aaPredicted RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 CROCCP2Q86T23 111 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 VPS37DQ86XT2 251 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 DDX54Q8TDD1 881 aaKnown RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 NUP133Q8WUM0 1156 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 ATXN2LQ8WWM7 1075 aaKnown RBP5.3□□□□□ -1.56
PRKD3-210ENST00000494667 LRRC45Q96CN5 670 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 RAB17Q9H0T7 212 aa5.3□□□□□ -1.56
PRKD3-210ENST00000494667 GCOM1H8Y6P7 765 aaPredicted RBP5.29□□□□□ -1.56
PRKD3-210ENST00000494667 WASLO00401 505 aaPredicted RBP5.29□□□□□ -1.56
PRKD3-210ENST00000494667 N4BP3O15049 544 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 CREB3O43889 395 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 ECE2O60344 883 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 MYL1P05976 194 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 MYZAPP0CAP1 466 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 CD44P16070 742 aaKnown RBP5.29□□□□□ -1.56
PRKD3-210ENST00000494667 HOXA7P31268 230 aaPredicted RBP5.29□□□□□ -1.56
PRKD3-210ENST00000494667 KIF5BP33176 963 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 KRT9P35527 623 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 CLCN2P51788 898 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 INHBCP55103 352 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 MRPS25P82663 173 aaKnown RBP5.29□□□□□ -1.56
PRKD3-210ENST00000494667 CTDSPL2Q05D32 466 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 SULT2A1Q06520 285 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 ZNF844Q08AG5 666 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 TTF1Q15361 905 aaPredicted RBP5.29□□□□□ -1.56
PRKD3-210ENST00000494667 IMMTQ16891 758 aaKnown RBP5.29□□□□□ -1.56
PRKD3-210ENST00000494667 COBLL1Q53SF7 1204 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.29□□□□□ -1.56
PRKD3-210ENST00000494667 ATP8B4Q8TF62 1192 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 KAZALD1Q96I82 304 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 XPO6Q96QU8 1125 aaKnown RBP5.29□□□□□ -1.56
PRKD3-210ENST00000494667 TRIM7Q9C029 511 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 RANBP17Q9H2T7 1088 aaKnown RBP5.29□□□□□ -1.56
PRKD3-210ENST00000494667 PCMTD2Q9NV79 361 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 PANK4Q9NVE7 773 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 DDX25Q9UHL0 483 aaKnown RBP5.29□□□□□ -1.56
PRKD3-210ENST00000494667 AFDNP55196 1824 aaKnown RBP5.29□□□□□ -1.56
PRKD3-210ENST00000494667 ARFGEF2Q9Y6D5 1785 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 FRMD3A2A2Y4 597 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 TACC1O75410 805 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 GJB6O95452 261 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 SRGNP10124 158 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 MMP13P45452 471 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 ATP1A2P50993 1020 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 PHEXP78562 749 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 LMNTD2Q8IXW0 634 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 MB21D1Q8N884 522 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 KIFAP3Q92845 792 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 FBXW7Q969H0 707 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 PGM2Q96G03 612 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 YIPF3Q9GZM5 350 aa5.29□□□□□ -1.56
PRKD3-210ENST00000494667 IQCGQ9H095 443 aaKnown RBP5.29□□□□□ -1.56
PRKD3-210ENST00000494667 FOXP1Q9H334 677 aaPredicted RBP5.29□□□□□ -1.56
PRKD3-210ENST00000494667 DNAAF2Q9NVR5 837 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms