RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 FFAR3O14843 346 aa6.8□□□□□ -1.32
SMC4-224ENST00000494612 FBLN1P23142 703 aa6.8□□□□□ -1.32
SMC4-224ENST00000494612 KCNC1P48547 511 aa6.8□□□□□ -1.32
SMC4-224ENST00000494612 ST7Q9NRC1 585 aa6.8□□□□□ -1.32
SMC4-224ENST00000494612 R3HCC1Q9Y3T6 440 aaKnown RBP6.8□□□□□ -1.32
SMC4-224ENST00000494612 GSTM1P09488 218 aa6.79□□□□□ -1.32
SMC4-224ENST00000494612 IMPDH2P12268 514 aa6.79□□□□□ -1.32
SMC4-224ENST00000494612 PMS1P54277 932 aaKnown RBP6.79□□□□□ -1.32
SMC4-224ENST00000494612 HLA-DQA1Q5Y7H0 255 aa6.79□□□□□ -1.32
SMC4-224ENST00000494612 LARP1BQ659C4 914 aaKnown RBP6.79□□□□□ -1.32
SMC4-224ENST00000494612 CKAP2LQ8IYA6 745 aa6.79□□□□□ -1.32
SMC4-224ENST00000494612 TAB3Q8N5C8 712 aaPredicted RBP6.79□□□□□ -1.32
SMC4-224ENST00000494612 LNPKQ9C0E8 428 aa6.79□□□□□ -1.32
SMC4-224ENST00000494612 SRRDQ9UH36 339 aa6.79□□□□□ -1.32
SMC4-224ENST00000494612 CCDC85CA6NKD9 419 aa6.78□□□□□ -1.32
SMC4-224ENST00000494612 FGF10O15520 208 aaPredicted RBP6.78□□□□□ -1.32
SMC4-224ENST00000494612 SRGAP3O43295 1099 aa6.78□□□□□ -1.32
SMC4-224ENST00000494612 PRICKLE3O43900 615 aaPredicted RBP6.78□□□□□ -1.32
SMC4-224ENST00000494612 ZNF445P59923 1031 aa6.78□□□□□ -1.32
SMC4-224ENST00000494612 ZXDAP98168 799 aa6.78□□□□□ -1.32
SMC4-224ENST00000494612 ZYXQ15942 572 aaKnown RBP6.78□□□□□ -1.32
SMC4-224ENST00000494612 UBXN11Q5T124 520 aa6.78□□□□□ -1.32
SMC4-224ENST00000494612 ZC3H14Q6PJT7 736 aaKnown RBP6.78□□□□□ -1.32
SMC4-224ENST00000494612 DPH6Q7L8W6 267 aa6.78□□□□□ -1.32
SMC4-224ENST00000494612 CCDC144CPQ8IYA2 1237 aa6.78□□□□□ -1.32
SMC4-224ENST00000494612 DSCC1Q9BVC3 393 aa6.78□□□□□ -1.32
SMC4-224ENST00000494612 HIRIP3Q9BW71 556 aaPredicted RBP6.78□□□□□ -1.32
SMC4-224ENST00000494612 FAM86C1Q9NVL1 165 aa6.78□□□□□ -1.32
SMC4-224ENST00000494612 PRKAG3Q9UGI9 489 aa6.78□□□□□ -1.32
SMC4-224ENST00000494612 LOC105371045A0A1W2PR82 267 aa6.77□□□□□ -1.33
SMC4-224ENST00000494612 H0Y8X5 98 aa6.77□□□□□ -1.33
SMC4-224ENST00000494612 CYBBP04839 570 aa6.77□□□□□ -1.33
SMC4-224ENST00000494612 DBHP09172 617 aa6.77□□□□□ -1.33
SMC4-224ENST00000494612 ZNF200P98182 395 aaPredicted RBP6.77□□□□□ -1.33
SMC4-224ENST00000494612 RBL2Q08999 1139 aa6.77□□□□□ -1.33
SMC4-224ENST00000494612 AXDND1Q5T1B0 1012 aaPredicted RBP6.77□□□□□ -1.33
SMC4-224ENST00000494612 ZFYVE27Q5T4F4 411 aa6.77□□□□□ -1.33
SMC4-224ENST00000494612 PAQR3Q6TCH7 311 aa6.77□□□□□ -1.33
SMC4-224ENST00000494612 PPFIBP1Q86W92 1011 aa6.77□□□□□ -1.33
SMC4-224ENST00000494612 NLGN2Q8NFZ4 835 aa6.77□□□□□ -1.33
SMC4-224ENST00000494612 TRIM55Q9BYV6 548 aa6.77□□□□□ -1.33
SMC4-224ENST00000494612 ACTR10Q9NZ32 417 aa6.77□□□□□ -1.33
SMC4-224ENST00000494612 PCDHB10Q9UN67 800 aa6.77□□□□□ -1.33
SMC4-224ENST00000494612 A0A1W2PQH9 124 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 GUCY2CP25092 1073 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 LIMS1P48059 325 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 SLURP1P55000 103 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 CCDC144BQ3MJ40 725 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 VWA3BQ502W6 1294 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 DCAF15Q66K64 600 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 CWF19L1Q69YN2 538 aaKnown RBP6.76□□□□□ -1.33
SMC4-224ENST00000494612 NLGN1Q8N2Q7 840 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 CELF2-AS1Q8N7Q2 184 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 NAT16Q8N8M0 369 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 RBBP8NLQ8NC74 664 aaPredicted RBP6.76□□□□□ -1.33
SMC4-224ENST00000494612 FCRL3Q96P31 734 aaPredicted RBP6.76□□□□□ -1.33
SMC4-224ENST00000494612 GP6Q9HCN6 339 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 PDLIM7Q9NR12 457 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 USP40Q9NVE5 1235 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 PLA2G2DQ9UNK4 145 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 HCFC2Q9Y5Z7 792 aa6.76□□□□□ -1.33
SMC4-224ENST00000494612 KLF4O43474 513 aa6.75□□□□□ -1.33
SMC4-224ENST00000494612 ATF2P15336 505 aa6.75□□□□□ -1.33
SMC4-224ENST00000494612 PFKLP17858 780 aa6.75□□□□□ -1.33
SMC4-224ENST00000494612 TARBP2Q15633 366 aaKnown RBP6.75□□□□□ -1.33
SMC4-224ENST00000494612 TDRD10Q5VZ19 366 aaKnown RBP6.75□□□□□ -1.33
SMC4-224ENST00000494612 CYP2R1Q6VVX0 501 aa6.75□□□□□ -1.33
SMC4-224ENST00000494612 UNC5AQ6ZN44 842 aa6.75□□□□□ -1.33
SMC4-224ENST00000494612 JAMLQ86YT9 394 aa6.75□□□□□ -1.33
SMC4-224ENST00000494612 OR6P1Q8NGX9 317 aa6.75□□□□□ -1.33
SMC4-224ENST00000494612 MICAL1Q8TDZ2 1067 aa6.75□□□□□ -1.33
SMC4-224ENST00000494612 SMARCC1Q92922 1105 aaPredicted RBP6.75□□□□□ -1.33
SMC4-224ENST00000494612 BRF1Q92994 677 aa6.75□□□□□ -1.33
SMC4-224ENST00000494612 TM9SF2Q99805 663 aa6.75□□□□□ -1.33
SMC4-224ENST00000494612 ZSWIM4Q9H7M6 989 aa6.75□□□□□ -1.33
SMC4-224ENST00000494612 FHOD1Q9Y613 1164 aa6.75□□□□□ -1.33
SMC4-224ENST00000494612 LTBP3Q9NS15 1303 aa6.75□□□□□ -1.33
SMC4-224ENST00000494612 A0A1W2PQ27 194 aa6.74□□□□□ -1.33
SMC4-224ENST00000494612 A0A1W2PQ64 194 aa6.74□□□□□ -1.33
SMC4-224ENST00000494612 A0A1W2PQC6 194 aa6.74□□□□□ -1.33
SMC4-224ENST00000494612 A0A1W2PQD8 194 aa6.74□□□□□ -1.33
SMC4-224ENST00000494612 B2RBV5 119 aa6.74□□□□□ -1.33
SMC4-224ENST00000494612 U2SURPO15042 1029 aaKnown RBP6.74□□□□□ -1.33
SMC4-224ENST00000494612 DDAH1O94760 285 aa6.74□□□□□ -1.33
SMC4-224ENST00000494612 PLA2G1BP04054 148 aaKnown RBP6.74□□□□□ -1.33
SMC4-224ENST00000494612 TNFRSF1AP19438 455 aa6.74□□□□□ -1.33
SMC4-224ENST00000494612 CD247P20963 164 aa6.74□□□□□ -1.33
SMC4-224ENST00000494612 MAGEA10P43363 369 aaPredicted RBP6.74□□□□□ -1.33
SMC4-224ENST00000494612 NOP2P46087 812 aaKnown RBP6.74□□□□□ -1.33
SMC4-224ENST00000494612 FOXO4P98177 505 aa6.74□□□□□ -1.33
SMC4-224ENST00000494612 BMS1Q14692 1282 aaKnown RBP6.74□□□□□ -1.33
SMC4-224ENST00000494612 TNNI3KQ59H18 835 aa6.74□□□□□ -1.33
SMC4-224ENST00000494612 NOL9Q5SY16 702 aaKnown RBP6.74□□□□□ -1.33
SMC4-224ENST00000494612 FNIP1Q8TF40 1166 aa6.74□□□□□ -1.33
SMC4-224ENST00000494612 ARMC5Q96C12 935 aa6.74□□□□□ -1.33
SMC4-224ENST00000494612 PTCHD1Q96NR3 888 aa6.74□□□□□ -1.33
SMC4-224ENST00000494612 ZNF451Q9Y4E5 1061 aa6.74□□□□□ -1.33
SMC4-224ENST00000494612 OVOL3O00110 214 aa6.73□□□□□ -1.33
SMC4-224ENST00000494612 TP53P04637 393 aaPredicted RBP6.73□□□□□ -1.33
SMC4-224ENST00000494612 CORO7P57737 925 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms