RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 CDK5RAP2Q96SN8 1893 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 USP17L12C9JPN9 530 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 USP17L21D6R901 530 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 MYL3P08590 195 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 UBTFL1P0CB47 393 aaPredicted RBP13.28□□□□□ -0.28
TRIM59-206ENST00000494486 PTGS1P23219 599 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 SLC4A3P48751 1232 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 CPT1AP50416 773 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 ADAM15Q13444 863 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 LRRC8DQ7L1W4 858 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 FBXO11Q86XK2 927 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 WDR63Q8IWG1 891 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 TMEM105Q8N8V8 129 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 MSLNLQ96KJ4 702 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 SLF1Q9BQI6 1058 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 PHF7Q9BWX1 381 aaPredicted RBP13.28□□□□□ -0.28
TRIM59-206ENST00000494486 GOPCQ9HD26 462 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 SNRKQ9NRH2 765 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 HDAC5Q9UQL6 1122 aa13.28□□□□□ -0.28
TRIM59-206ENST00000494486 COL11A1P12107 1806 aaPredicted RBP13.27□□□□□ -0.28
TRIM59-206ENST00000494486 KPNA6O60684 536 aa13.27□□□□□ -0.29
TRIM59-206ENST00000494486 ZBED4O75132 1171 aa13.27□□□□□ -0.29
TRIM59-206ENST00000494486 AMHP03971 560 aa13.27□□□□□ -0.29
TRIM59-206ENST00000494486 CYP2E1P05181 493 aaPredicted RBP13.27□□□□□ -0.29
TRIM59-206ENST00000494486 CNTN2Q02246 1040 aa13.27□□□□□ -0.29
TRIM59-206ENST00000494486 FAM83BQ5T0W9 1011 aa13.27□□□□□ -0.29
TRIM59-206ENST00000494486 TAPT1Q6NXT6 567 aa13.27□□□□□ -0.29
TRIM59-206ENST00000494486 CPXCR1Q8N123 301 aa13.27□□□□□ -0.29
TRIM59-206ENST00000494486 FAM133AQ8N9E0 248 aa13.27□□□□□ -0.29
TRIM59-206ENST00000494486 MIGA1Q8NAN2 632 aa13.27□□□□□ -0.29
TRIM59-206ENST00000494486 PRPF38AQ8NAV1 312 aaKnown RBP13.27□□□□□ -0.29
TRIM59-206ENST00000494486 IGFLR1Q9H665 355 aa13.27□□□□□ -0.29
TRIM59-206ENST00000494486 PDGFCQ9NRA1 345 aa13.27□□□□□ -0.29
TRIM59-206ENST00000494486 SWAP70Q9UH65 585 aa13.27□□□□□ -0.29
TRIM59-206ENST00000494486 CTDP1Q9Y5B0 961 aaPredicted RBP13.27□□□□□ -0.29
TRIM59-206ENST00000494486 PTPRCP08575 1304 aa13.27□□□□□ -0.29
TRIM59-206ENST00000494486 TRIOO75962 3097 aa13.27□□□□□ -0.29
TRIM59-206ENST00000494486 NBNO60934 754 aa13.26□□□□□ -0.29
TRIM59-206ENST00000494486 NDUFV1P49821 464 aa13.26□□□□□ -0.29
TRIM59-206ENST00000494486 RRP1P56182 461 aaKnown RBP13.26□□□□□ -0.29
TRIM59-206ENST00000494486 COASYQ13057 564 aa13.26□□□□□ -0.29
TRIM59-206ENST00000494486 PTPRSQ13332 1948 aa13.26□□□□□ -0.29
TRIM59-206ENST00000494486 TCTN1Q2MV58 587 aa13.26□□□□□ -0.29
TRIM59-206ENST00000494486 DUSP28Q4G0W2 176 aa13.26□□□□□ -0.29
TRIM59-206ENST00000494486 BRDTQ58F21 947 aaPredicted RBP13.26□□□□□ -0.29
TRIM59-206ENST00000494486 SMRP1Q8NCR6 262 aa13.26□□□□□ -0.29
TRIM59-206ENST00000494486 KCNG4Q8TDN1 519 aa13.26□□□□□ -0.29
TRIM59-206ENST00000494486 RPGRIP1Q96KN7 1286 aa13.26□□□□□ -0.29
TRIM59-206ENST00000494486 LINC01565O15544 149 aa13.25□□□□□ -0.29
TRIM59-206ENST00000494486 LMNAP02545 664 aaKnown RBP13.25□□□□□ -0.29
TRIM59-206ENST00000494486 RB1P06400 928 aa13.25□□□□□ -0.29
TRIM59-206ENST00000494486 RBL2Q08999 1139 aa13.25□□□□□ -0.29
TRIM59-206ENST00000494486 PTGISQ16647 500 aa13.25□□□□□ -0.29
TRIM59-206ENST00000494486 TMEM63BQ5T3F8 832 aa13.25□□□□□ -0.29
TRIM59-206ENST00000494486 ASTLQ6HA08 431 aaPredicted RBP13.25□□□□□ -0.29
TRIM59-206ENST00000494486 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRIM59-206ENST00000494486 KIAA1211Q6ZU35 1233 aa13.25□□□□□ -0.29
TRIM59-206ENST00000494486 CLEC10AQ8IUN9 316 aa13.25□□□□□ -0.29
TRIM59-206ENST00000494486 CCDC17Q96LX7 622 aa13.25□□□□□ -0.29
TRIM59-206ENST00000494486 PCDHGC5Q9Y5F6 944 aa13.25□□□□□ -0.29
TRIM59-206ENST00000494486 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.25□□□□□ -0.29
TRIM59-206ENST00000494486 MYO15AQ9UKN7 3530 aa13.25□□□□□ -0.29
TRIM59-206ENST00000494486 ACACBO00763 2458 aa13.24□□□□□ -0.29
TRIM59-206ENST00000494486 ATRXP46100 2492 aa13.24□□□□□ -0.29
TRIM59-206ENST00000494486 TET1Q8NFU7 2136 aa13.24□□□□□ -0.29
TRIM59-206ENST00000494486 EEF2P13639 858 aaKnown RBP13.24□□□□□ -0.29
TRIM59-206ENST00000494486 AKR1B1P15121 316 aa13.24□□□□□ -0.29
TRIM59-206ENST00000494486 GTF2F1P35269 517 aaKnown RBP eCLIP13.24□□□□□ -0.299e-6■□□□□ 8.8
TRIM59-206ENST00000494486 TTC39AQ5SRH9 613 aa13.24□□□□□ -0.29
TRIM59-206ENST00000494486 TMED8Q6PL24 325 aaPredicted RBP13.24□□□□□ -0.29
TRIM59-206ENST00000494486 ZBTB33Q86T24 672 aa13.24□□□□□ -0.29
TRIM59-206ENST00000494486 MYOCDQ8IZQ8 938 aa13.24□□□□□ -0.29
TRIM59-206ENST00000494486 PPP2R3CQ969Q6 453 aa13.24□□□□□ -0.29
TRIM59-206ENST00000494486 YME1L1Q96TA2 773 aa13.24□□□□□ -0.29
TRIM59-206ENST00000494486 KANSL2Q9H9L4 492 aa13.24□□□□□ -0.29
TRIM59-206ENST00000494486 RAVER2Q9HCJ3 691 aaKnown RBP13.24□□□□□ -0.29
TRIM59-206ENST00000494486 VTA1Q9NP79 307 aa13.24□□□□□ -0.29
TRIM59-206ENST00000494486 INCENPQ9NQS7 918 aa13.24□□□□□ -0.29
TRIM59-206ENST00000494486 MYH1P12882 1939 aa13.23□□□□□ -0.29
TRIM59-206ENST00000494486 TANC1Q9C0D5 1861 aa13.23□□□□□ -0.29
TRIM59-206ENST00000494486 C5orf67F2Z3F1 127 aa13.23□□□□□ -0.29
TRIM59-206ENST00000494486 RAD21O60216 631 aa13.23□□□□□ -0.29
TRIM59-206ENST00000494486 ATF7P17544 494 aaPredicted RBP13.23□□□□□ -0.29
TRIM59-206ENST00000494486 SDHBP21912 280 aa13.23□□□□□ -0.29
TRIM59-206ENST00000494486 CLCN5P51795 746 aa13.23□□□□□ -0.29
TRIM59-206ENST00000494486 OAZ1P54368 228 aa13.23□□□□□ -0.29
TRIM59-206ENST00000494486 CCDC158Q5M9N0 1113 aa13.23□□□□□ -0.29
TRIM59-206ENST00000494486 EEPD1Q7L9B9 569 aa13.23□□□□□ -0.29
TRIM59-206ENST00000494486 FBXO16Q8IX29 292 aaPredicted RBP13.23□□□□□ -0.29
TRIM59-206ENST00000494486 UBALD2Q8IYN6 164 aa13.23□□□□□ -0.29
TRIM59-206ENST00000494486 C11orf84Q9BUA3 381 aaPredicted RBP13.23□□□□□ -0.29
TRIM59-206ENST00000494486 PIH1D3Q9NQM4 214 aaKnown RBP13.23□□□□□ -0.29
TRIM59-206ENST00000494486 MCM9Q9NXL9 1143 aa13.23□□□□□ -0.29
TRIM59-206ENST00000494486 CLEC1BQ9P126 229 aa13.23□□□□□ -0.29
TRIM59-206ENST00000494486 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
TRIM59-206ENST00000494486 USP15Q9Y4E8 981 aaPredicted RBP13.23□□□□□ -0.29
TRIM59-206ENST00000494486 PARP14Q460N5 1801 aa13.23□□□□□ -0.29
TRIM59-206ENST00000494486 LGR5O75473 907 aa13.22□□□□□ -0.29
TRIM59-206ENST00000494486 CKBP12277 381 aa13.22□□□□□ -0.29
TRIM59-206ENST00000494486 KIAA0319Q5VV43 1072 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms