RNA–Protein interactions for RNA: ENST00000494424.1

TSPAN6-202, Transcript of tetraspanin 6, humanhuman

TSL 2

Gene TSPAN6, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-202ENST00000494424 PCSK9Q8NBP7 692 aaKnown RBP7.88□□□□□ -1.15
TSPAN6-202ENST00000494424 VTI1AQ96AJ9 217 aa7.88□□□□□ -1.15
TSPAN6-202ENST00000494424 HAUS7Q99871 368 aa7.88□□□□□ -1.15
TSPAN6-202ENST00000494424 METTL22Q9BUU2 404 aaPredicted RBP7.88□□□□□ -1.15
TSPAN6-202ENST00000494424 IDI2Q9BXS1 227 aa7.88□□□□□ -1.15
TSPAN6-202ENST00000494424 SEZ6LQ9BYH1 1024 aa7.88□□□□□ -1.15
TSPAN6-202ENST00000494424 SENP2Q9HC62 589 aa7.88□□□□□ -1.15
TSPAN6-202ENST00000494424 A0A1B0GUL6 1792 aa7.88□□□□□ -1.15
TSPAN6-202ENST00000494424 HELZ2Q9BYK8 2649 aaKnown RBP7.88□□□□□ -1.15
TSPAN6-202ENST00000494424 DOCK2Q92608 1830 aa7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 LOC730098B7Z3J9 87 aa7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 ST8SIA5O15466 376 aa7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 FRAT2O75474 233 aaPredicted RBP7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 CNMDO75829 334 aa7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 CSF1RP07333 972 aa7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 CST5P28325 142 aaPredicted RBP7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 ADORA2AP29274 412 aa7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 ATXN1P54253 815 aaKnown RBP7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 CHAF1AQ13111 956 aaPredicted RBP7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 COL9A3Q14050 684 aaPredicted RBP7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 CCSAPQ6IQ19 270 aaPredicted RBP7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 EP400NLQ6ZTU2 488 aa7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 VPS37DQ86XT2 251 aa7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 RUBCNQ92622 972 aa7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 HINFPQ9BQA5 517 aa7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 NOC4LQ9BVI4 516 aaKnown RBP7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 WNT8AQ9H1J5 351 aa7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 USP40Q9NVE5 1235 aa7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 PCDHB9Q9Y5E1 797 aa7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 ZNF236Q9UL36 1845 aa7.87□□□□□ -1.15
TSPAN6-202ENST00000494424 UMODL1Q5DID0 1318 aa7.86□□□□□ -1.15
TSPAN6-202ENST00000494424 BPTFQ12830 3046 aa7.86□□□□□ -1.15
TSPAN6-202ENST00000494424 TIMP2P16035 220 aa7.86□□□□□ -1.15
TSPAN6-202ENST00000494424 CAP2P40123 477 aa7.86□□□□□ -1.15
TSPAN6-202ENST00000494424 RGS3P49796 1198 aa7.86□□□□□ -1.15
TSPAN6-202ENST00000494424 LBX2Q6XYB7 198 aa7.86□□□□□ -1.15
TSPAN6-202ENST00000494424 SPRED2Q7Z698 418 aa7.86□□□□□ -1.15
TSPAN6-202ENST00000494424 GPR161Q8N6U8 529 aaKnown RBP7.86□□□□□ -1.15
TSPAN6-202ENST00000494424 KIFC2Q96AC6 838 aa7.86□□□□□ -1.15
TSPAN6-202ENST00000494424 VWCEQ96DN2 955 aa7.86□□□□□ -1.15
TSPAN6-202ENST00000494424 RTKNQ9BST9 563 aa7.86□□□□□ -1.15
TSPAN6-202ENST00000494424 CLDND1Q9NY35 253 aa7.86□□□□□ -1.15
TSPAN6-202ENST00000494424 ASPMQ8IZT6 3477 aa7.86□□□□□ -1.15
TSPAN6-202ENST00000494424 SYNRGQ9UMZ2 1314 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 SMCHD1A6NHR9 2005 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 PRR5-ARHGAP8B1AHC4 643 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 ESPNB1AK53 854 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 USP17L10C9JJH3 530 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 COBLO75128 1261 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 BAIAP3O94812 1187 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 ZIC2O95409 532 aaPredicted RBP7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 DDX58O95786 925 aaKnown RBP7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 ASGR1P07306 291 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 NR3C2P08235 984 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 ICAM3P32942 547 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 RFC2P35250 354 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 SOX11P35716 441 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 ARHGAP8P85298 464 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 INTS6LQ5JSJ4 861 aaKnown RBP7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 FBXO33Q7Z6M2 555 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 ABRAQ8N0Z2 381 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 TMEM105Q8N8V8 129 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 MAML3Q96JK9 1138 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 KLF16Q9BXK1 252 aaPredicted RBP7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 GDPD2Q9HCC8 539 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 ATP13A2Q9NQ11 1180 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 PCDHGC5Q9Y5F6 944 aa7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 USP9XQ93008 2570 aaPredicted RBP7.85□□□□□ -1.15
TSPAN6-202ENST00000494424 RFX7Q2KHR2 1363 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 DDTLA6NHG4 134 aaPredicted RBP7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 H7C1W4 665 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 PLIN1O60240 522 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 UPP2O95045 317 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 PDGFBP01127 241 aaPredicted RBP7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 LTBRP36941 435 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 ABL2P42684 1182 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 IFIT5Q13325 482 aaKnown RBP7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 PTPN21Q16825 1174 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 CAVIN4Q5BKX8 364 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 TCEAL5Q5H9L2 206 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 LRSAM1Q6UWE0 723 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 RPAINQ86UA6 219 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 SLC43A3Q8NBI5 491 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 SHCBP1Q8NEM2 672 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 NSUN3Q9H649 340 aaKnown RBP7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 SPC25Q9HBM1 224 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 ANGPTL2Q9UKU9 493 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 MTUS1Q9ULD2 1270 aa7.84□□□□□ -1.15
TSPAN6-202ENST00000494424 FRYLO94915 3013 aa7.84□□□□□ -1.16
TSPAN6-202ENST00000494424 CEP295Q9C0D2 2601 aa7.83□□□□□ -1.16
TSPAN6-202ENST00000494424 LCHNA4D1U4 455 aa7.83□□□□□ -1.16
TSPAN6-202ENST00000494424 USP17L15C9J2P7 530 aa7.83□□□□□ -1.16
TSPAN6-202ENST00000494424 USP17L13C9JLJ4 530 aa7.83□□□□□ -1.16
TSPAN6-202ENST00000494424 USP17L11C9JVI0 530 aa7.83□□□□□ -1.16
TSPAN6-202ENST00000494424 USP17L18D6R9N7 530 aa7.83□□□□□ -1.16
TSPAN6-202ENST00000494424 USP17L22D6RA61 530 aa7.83□□□□□ -1.16
TSPAN6-202ENST00000494424 USP17L17D6RBQ6 530 aa7.83□□□□□ -1.16
TSPAN6-202ENST00000494424 USP17L19D6RCP7 530 aa7.83□□□□□ -1.16
TSPAN6-202ENST00000494424 USP17L20D6RJB6 530 aa7.83□□□□□ -1.16
TSPAN6-202ENST00000494424 DUSP11O75319 330 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms