RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 E2F5Q15329 346 aa7.85□□□□□ -1.15
EPHA3-203ENST00000494014 GLE1Q53GS7 698 aaKnown RBP7.85□□□□□ -1.15
EPHA3-203ENST00000494014 ZNF572Q7Z3I7 529 aaPredicted RBP7.85□□□□□ -1.15
EPHA3-203ENST00000494014 GSPT2Q8IYD1 628 aaKnown RBP7.85□□□□□ -1.15
EPHA3-203ENST00000494014 RASSF8Q8NHQ8 419 aa7.85□□□□□ -1.15
EPHA3-203ENST00000494014 ARL8AQ96BM9 186 aa7.85□□□□□ -1.15
EPHA3-203ENST00000494014 OSBPL9Q96SU4 736 aa7.85□□□□□ -1.15
EPHA3-203ENST00000494014 EPN1Q9Y6I3 576 aaPredicted RBP7.85□□□□□ -1.15
EPHA3-203ENST00000494014 PITPNM2Q9BZ72 1349 aa7.85□□□□□ -1.15
EPHA3-203ENST00000494014 RBBP6Q7Z6E9 1792 aaKnown RBP7.85□□□□□ -1.15
EPHA3-203ENST00000494014 HMGB1P1B2RPK0 211 aaPredicted RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 KRT86O43790 486 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 ATP1A1P05023 1023 aaKnown RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 NR1D1P20393 614 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 KRT83P78385 493 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 HDLBPQ00341 1268 aaKnown RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 ANKRD20A8PQ5CZ79 823 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 TTC39AQ5SRH9 613 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 CAPRIN2Q6IMN6 1127 aaKnown RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 RNPC3Q96LT9 517 aaKnown RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 SLF1Q9BQI6 1058 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 GUCA1BQ9UMX6 200 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 PA2G4Q9UQ80 394 aaKnown RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 UTRNP46939 3433 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 ERICH2A1L162 156 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 FRMD3A2A2Y4 597 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 AHCYL1O43865 530 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 NDUFA10O95299 355 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 FXR1P51114 621 aaKnown RBP eCLIP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 SPAG1Q07617 926 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 RIPK1Q13546 671 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 SLC5A9Q2M3M2 681 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 ZC3H12AQ5D1E8 599 aaKnown RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 COL13A1Q5TAT6 717 aaPredicted RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 CDKAL1Q5VV42 579 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 OTUD7BQ6GQQ9 843 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 TRMT44Q8IYL2 757 aaKnown RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 SPAG5Q96R06 1193 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 C9orf78Q9NZ63 289 aaPredicted RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 SCN9AQ15858 1988 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 EME2A4GXA9 379 aaPredicted RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 PI4KAP2A4QPH2 592 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 KIF28PB7ZC32 967 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 BUB1BO60566 1050 aaPredicted RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 ZMYND10O75800 440 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 HSPA8P11142 646 aaKnown RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 PIP4K2AP48426 406 aaPredicted RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 VEGFBP49765 207 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 ATP1A2P50993 1020 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 WASHC4Q2M389 1173 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 SLC9C2Q5TAH2 1124 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 C3orf67Q6ZVT6 689 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 PI4KAP1Q8N8J0 262 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 CYFIP2Q96F07 1278 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 PLA2G12BQ9BX93 195 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 HAUS2Q9NVX0 235 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 CORO1CQ9ULV4 474 aaPredicted RBP7.84□□□□□ -1.15
EPHA3-203ENST00000494014 TRPC6Q9Y210 931 aa7.84□□□□□ -1.15
EPHA3-203ENST00000494014 SYNRGQ9UMZ2 1314 aa7.84□□□□□ -1.16
EPHA3-203ENST00000494014 E7EVH7 732 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 E7EWF7 191 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 CPLX1O14810 134 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 NPM3O75607 178 aaKnown RBP7.83□□□□□ -1.16
EPHA3-203ENST00000494014 ABL1P00519 1130 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 FESP07332 822 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 RPSAP08865 295 aaKnown RBP7.83□□□□□ -1.16
EPHA3-203ENST00000494014 ZNF280AP59817 542 aaPredicted RBP7.83□□□□□ -1.16
EPHA3-203ENST00000494014 CFAP58Q5T655 872 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 TNS4Q8IZW8 715 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 MREGQ8N565 214 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 KRI1Q8N9T8 703 aaKnown RBP7.83□□□□□ -1.16
EPHA3-203ENST00000494014 ZBTB38Q8NAP3 1195 aaPredicted RBP7.83□□□□□ -1.16
EPHA3-203ENST00000494014 TRIM58Q8NG06 486 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 CUL5Q93034 780 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 CAPZA3Q96KX2 299 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 ZIM3Q96PE6 472 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 HELLSQ9NRZ9 838 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 RIPOR2Q9Y4F9 1068 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 ENC1O14682 589 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 ATP6V1G2O95670 118 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 PCCAP05165 728 aaPredicted RBP7.83□□□□□ -1.16
EPHA3-203ENST00000494014 POTEIP0CG38 1075 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 POTEJP0CG39 1038 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 IBSPP21815 317 aaPredicted RBP7.83□□□□□ -1.16
EPHA3-203ENST00000494014 VAV2P52735 878 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 DEFB115Q30KQ5 88 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 CCDC122Q5T0U0 273 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 APLFQ8IW19 511 aaPredicted RBP7.83□□□□□ -1.16
EPHA3-203ENST00000494014 MFN1Q8IWA4 741 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 LARGE2Q8N3Y3 721 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 SPATA20Q8TB22 786 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 PARD3BQ8TEW8 1205 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 XAGE3Q8WTP9 111 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 RRP36Q96EU6 259 aaKnown RBP7.83□□□□□ -1.16
EPHA3-203ENST00000494014 EYA3Q99504 573 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 NUP88Q99567 741 aaPredicted RBP7.83□□□□□ -1.16
EPHA3-203ENST00000494014 NOD2Q9HC29 1040 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 HDAC6Q9UBN7 1215 aa7.83□□□□□ -1.16
EPHA3-203ENST00000494014 C15orf41Q9Y2V0 281 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms