RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 STK38Q15208 465 aa14.45□□□□□ -0.1
VPS52-220ENST00000493674 INF2Q27J81 1249 aa14.45□□□□□ -0.1
VPS52-220ENST00000493674 KLHL40Q2TBA0 621 aa14.45□□□□□ -0.1
VPS52-220ENST00000493674 SKOR2Q2VWA4 1001 aaPredicted RBP14.45□□□□□ -0.1
VPS52-220ENST00000493674 DEFB115Q30KQ5 88 aa14.45□□□□□ -0.1
VPS52-220ENST00000493674 JAKMIP3Q5VZ66 844 aa14.45□□□□□ -0.1
VPS52-220ENST00000493674 USP17L6PQ6QN14 398 aa14.45□□□□□ -0.1
VPS52-220ENST00000493674 SAMD3Q8N6K7 520 aa14.45□□□□□ -0.1
VPS52-220ENST00000493674 JMYQ8N9B5 988 aa14.45□□□□□ -0.1
VPS52-220ENST00000493674 MAF1Q9H063 256 aa14.45□□□□□ -0.1
VPS52-220ENST00000493674 FRMPD4Q14CM0 1322 aa14.44□□□□□ -0.1
VPS52-220ENST00000493674 TRAK2O60296 914 aa14.44□□□□□ -0.1
VPS52-220ENST00000493674 MBD3O95983 291 aa14.44□□□□□ -0.1
VPS52-220ENST00000493674 FOSP01100 380 aaPredicted RBP14.44□□□□□ -0.1
VPS52-220ENST00000493674 GTF2A2P52657 109 aa14.44□□□□□ -0.1
VPS52-220ENST00000493674 HUNKP57058 714 aa14.44□□□□□ -0.1
VPS52-220ENST00000493674 ATP2C1P98194 919 aaPredicted RBP14.44□□□□□ -0.1
VPS52-220ENST00000493674 TMEM132BQ14DG7 1078 aa14.44□□□□□ -0.1
VPS52-220ENST00000493674 AXDND1Q5T1B0 1012 aaPredicted RBP14.44□□□□□ -0.1
VPS52-220ENST00000493674 NEK8Q86SG6 692 aa14.44□□□□□ -0.1
VPS52-220ENST00000493674 RASAL3Q86YV0 1011 aa14.44□□□□□ -0.1
VPS52-220ENST00000493674 MB21D1Q8N884 522 aa14.44□□□□□ -0.1
VPS52-220ENST00000493674 C4orf32Q8N8J7 132 aa14.44□□□□□ -0.1
VPS52-220ENST00000493674 ANO3Q9BYT9 981 aa14.44□□□□□ -0.1
VPS52-220ENST00000493674 ASCC2Q9H1I8 757 aaPredicted RBP14.44□□□□□ -0.1
VPS52-220ENST00000493674 RAVER2Q9HCJ3 691 aaKnown RBP14.44□□□□□ -0.1
VPS52-220ENST00000493674 PCDHA7Q9UN72 937 aa14.44□□□□□ -0.1
VPS52-220ENST00000493674 CEP131Q9UPN4 1083 aa14.44□□□□□ -0.1
VPS52-220ENST00000493674 A0A1W2PQ27 194 aa14.43□□□□□ -0.1
VPS52-220ENST00000493674 A0A1W2PQ64 194 aa14.43□□□□□ -0.1
VPS52-220ENST00000493674 A0A1W2PQD8 194 aa14.43□□□□□ -0.1
VPS52-220ENST00000493674 TESPA1A2RU30 521 aaPredicted RBP14.43□□□□□ -0.1
VPS52-220ENST00000493674 CETPP11597 493 aa14.43□□□□□ -0.1
VPS52-220ENST00000493674 SREBF1P36956 1147 aa14.43□□□□□ -0.1
VPS52-220ENST00000493674 PABPC4Q13310 644 aaKnown RBP eCLIP14.43□□□□□ -0.13e-6■■■□□ 15.2
VPS52-220ENST00000493674 TKFCQ3LXA3 575 aa14.43□□□□□ -0.1
VPS52-220ENST00000493674 ADALQ6DHV7 355 aa14.43□□□□□ -0.1
VPS52-220ENST00000493674 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.43□□□□□ -0.1
VPS52-220ENST00000493674 TBCKQ8TEA7 893 aa14.43□□□□□ -0.1
VPS52-220ENST00000493674 BRI3BPQ8WY22 251 aa14.43□□□□□ -0.1
VPS52-220ENST00000493674 MBOAT7Q96N66 472 aa14.43□□□□□ -0.1
VPS52-220ENST00000493674 TEX13BQ9BXU2 312 aa14.43□□□□□ -0.1
VPS52-220ENST00000493674 MAP3K20Q9NYL2 800 aaKnown RBP14.43□□□□□ -0.1
VPS52-220ENST00000493674 FBXO2Q9UK22 296 aaPredicted RBP14.43□□□□□ -0.1
VPS52-220ENST00000493674 RPTORQ8N122 1335 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 FAM237AA0A1B0GTK4 181 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 GCOM1H8Y6P7 765 aaPredicted RBP14.42□□□□□ -0.1
VPS52-220ENST00000493674 NFIBO00712 420 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 CNMDO75829 334 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 POLR2MP0CAP2 368 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 PTPREP23469 700 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 HERVK_113P62684 666 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 MUM1L1Q5H9M0 696 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 SNRNP48Q6IEG0 339 aaKnown RBP14.42□□□□□ -0.1
VPS52-220ENST00000493674 RGMBQ6NW40 437 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
VPS52-220ENST00000493674 MOXD1Q6UVY6 613 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 ANKRD23Q86SG2 305 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 CPXCR1Q8N123 301 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 TBC1D5Q92609 795 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 CAPNS2Q96L46 248 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.42□□□□□ -0.1
VPS52-220ENST00000493674 BTBD7Q9P203 1132 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 RIPK3Q9Y572 518 aa14.42□□□□□ -0.1
VPS52-220ENST00000493674 CYP3A7-CYP3A51PA0A087WV96 503 aa14.41□□□□□ -0.1
VPS52-220ENST00000493674 CCL15-CCL14A0A0B4J2E2 113 aa14.41□□□□□ -0.1
VPS52-220ENST00000493674 CYP3A4P08684 503 aa14.41□□□□□ -0.1
VPS52-220ENST00000493674 ALAS1P13196 640 aa14.41□□□□□ -0.1
VPS52-220ENST00000493674 CYP3A7P24462 503 aa14.41□□□□□ -0.1
VPS52-220ENST00000493674 VEGFBP49765 207 aa14.41□□□□□ -0.1
VPS52-220ENST00000493674 USP11P51784 963 aa14.41□□□□□ -0.1
VPS52-220ENST00000493674 IRX3P78415 501 aaPredicted RBP14.41□□□□□ -0.1
VPS52-220ENST00000493674 ZNF174Q15697 407 aa14.41□□□□□ -0.1
VPS52-220ENST00000493674 CCL15Q16663 113 aa14.41□□□□□ -0.1
VPS52-220ENST00000493674 PPP4R3AQ6IN85 833 aa14.41□□□□□ -0.1
VPS52-220ENST00000493674 MCF2L2Q86YR7 1114 aa14.41□□□□□ -0.1
VPS52-220ENST00000493674 RIOX2Q8IUF8 465 aa14.41□□□□□ -0.1
VPS52-220ENST00000493674 CCDC102AQ96A19 550 aa14.41□□□□□ -0.1
VPS52-220ENST00000493674 RNF146Q9NTX7 359 aa14.41□□□□□ -0.1
VPS52-220ENST00000493674 SRPRBQ9Y5M8 271 aaKnown RBP14.41□□□□□ -0.1
VPS52-220ENST00000493674 DDX49Q9Y6V7 483 aaKnown RBP14.41□□□□□ -0.1
VPS52-220ENST00000493674 MYH9P35579 1960 aaKnown RBP14.4□□□□□ -0.1
VPS52-220ENST00000493674 BTBD19C9JJ37 291 aa14.4□□□□□ -0.1
VPS52-220ENST00000493674 LAD1O00515 517 aa14.4□□□□□ -0.1
VPS52-220ENST00000493674 CUTAO60888 179 aa14.4□□□□□ -0.1
VPS52-220ENST00000493674 CFBP00751 764 aa14.4□□□□□ -0.1
VPS52-220ENST00000493674 SLC10A3P09131 477 aa14.4□□□□□ -0.1
VPS52-220ENST00000493674 GCFC2P16383 781 aaKnown RBP14.4□□□□□ -0.1
VPS52-220ENST00000493674 ATP2B1P20020 1258 aa14.4□□□□□ -0.1
VPS52-220ENST00000493674 OSBPP22059 807 aa14.4□□□□□ -0.1
VPS52-220ENST00000493674 MARCKSP29966 332 aaPredicted RBP14.4□□□□□ -0.1
VPS52-220ENST00000493674 HOXA13P31271 388 aaPredicted RBP14.4□□□□□ -0.1
VPS52-220ENST00000493674 CIITAP33076 1130 aa14.4□□□□□ -0.1
VPS52-220ENST00000493674 MAP2K2P36507 400 aa14.4□□□□□ -0.1
VPS52-220ENST00000493674 STAT3P40763 770 aa14.4□□□□□ -0.1
VPS52-220ENST00000493674 PRPHP41219 470 aa14.4□□□□□ -0.1
VPS52-220ENST00000493674 ME1P48163 572 aa14.4□□□□□ -0.1
VPS52-220ENST00000493674 NOGQ13253 232 aa14.4□□□□□ -0.1
VPS52-220ENST00000493674 PTGDRQ13258 359 aa14.4□□□□□ -0.1
VPS52-220ENST00000493674 ARL6IP4Q66PJ3 421 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms