RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 ANKRD35Q8N283 1001 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 FAM184AQ8NB25 1140 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 REPS2Q8NFH8 660 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 INTS4Q96HW7 963 aaKnown RBP15.5■□□□□ 0.07
MSH6-208ENST00000493177 MAML3Q96JK9 1138 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 SPZ1Q9BXG8 430 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 C11orf49Q9H6J7 331 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 HOMER2Q9NSB8 354 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 ORC3Q9UBD5 711 aaPredicted RBP15.5■□□□□ 0.07
MSH6-208ENST00000493177 SEC63Q9UGP8 760 aaKnown RBP15.5■□□□□ 0.07
MSH6-208ENST00000493177 NR2E3Q9Y5X4 410 aa15.5■□□□□ 0.07
MSH6-208ENST00000493177 CENPFP49454 3210 aa15.49■□□□□ 0.07
MSH6-208ENST00000493177 hCG_1642624A0A1W2PR95 340 aa15.49■□□□□ 0.07
MSH6-208ENST00000493177 GJB2P29033 226 aa15.49■□□□□ 0.07
MSH6-208ENST00000493177 CCDC174Q6PII3 467 aa15.49■□□□□ 0.07
MSH6-208ENST00000493177 BTNL9Q6UXG8 535 aa15.49■□□□□ 0.07
MSH6-208ENST00000493177 DIS3LQ8TF46 1054 aaKnown RBP15.49■□□□□ 0.07
MSH6-208ENST00000493177 RRP36Q96EU6 259 aaKnown RBP15.49■□□□□ 0.07
MSH6-208ENST00000493177 SLC38A10Q9HBR0 1119 aa15.49■□□□□ 0.07
MSH6-208ENST00000493177 FBXO40Q9UH90 709 aa15.49■□□□□ 0.07
MSH6-208ENST00000493177 DDX20Q9UHI6 824 aaKnown RBP15.49■□□□□ 0.07
MSH6-208ENST00000493177 OGDHLQ9ULD0 1010 aa15.49■□□□□ 0.07
MSH6-208ENST00000493177 PRR12Q9ULL5 1215 aa15.49■□□□□ 0.07
MSH6-208ENST00000493177 V9GY48 417 aaPredicted RBP15.49■□□□□ 0.07
MSH6-208ENST00000493177 ALPK3Q96L96 1907 aa15.49■□□□□ 0.07
MSH6-208ENST00000493177 PRPF3O43395 683 aaKnown RBP15.48■□□□□ 0.07
MSH6-208ENST00000493177 CYTH3O43739 400 aa15.48■□□□□ 0.07
MSH6-208ENST00000493177 PLA2G6O60733 806 aa15.48■□□□□ 0.07
MSH6-208ENST00000493177 SMARCA1P28370 1054 aa15.48■□□□□ 0.07
MSH6-208ENST00000493177 FOSBP53539 338 aa15.48■□□□□ 0.07
MSH6-208ENST00000493177 OAZ1P54368 228 aa15.48■□□□□ 0.07
MSH6-208ENST00000493177 SNAP25P60880 206 aa15.48■□□□□ 0.07
MSH6-208ENST00000493177 FUT2Q10981 343 aa15.48■□□□□ 0.07
MSH6-208ENST00000493177 SMARCC2Q8TAQ2 1214 aa15.48■□□□□ 0.07
MSH6-208ENST00000493177 PIGSQ96S52 555 aa15.48■□□□□ 0.07
MSH6-208ENST00000493177 RNF26Q9BY78 433 aaPredicted RBP15.48■□□□□ 0.07
MSH6-208ENST00000493177 RIOX1Q9H6W3 641 aa15.48■□□□□ 0.07
MSH6-208ENST00000493177 JMJD4Q9H9V9 463 aa15.48■□□□□ 0.07
MSH6-208ENST00000493177 RBM27Q9P2N5 1060 aaKnown RBP15.48■□□□□ 0.07
MSH6-208ENST00000493177 KIF3AQ9Y496 699 aa15.48■□□□□ 0.07
MSH6-208ENST00000493177 TNRC18O15417 2968 aaPredicted RBP15.48■□□□□ 0.07
MSH6-208ENST00000493177 STK36Q9NRP7 1315 aa15.47■□□□□ 0.07
MSH6-208ENST00000493177 MYH6P13533 1939 aa15.47■□□□□ 0.07
MSH6-208ENST00000493177 ATP2A1O14983 1001 aa15.47■□□□□ 0.07
MSH6-208ENST00000493177 DEXIO95424 95 aa15.47■□□□□ 0.07
MSH6-208ENST00000493177 ALAS1P13196 640 aa15.47■□□□□ 0.07
MSH6-208ENST00000493177 CYBAP13498 195 aa15.47■□□□□ 0.07
MSH6-208ENST00000493177 CDC37Q16543 378 aaPredicted RBP15.47■□□□□ 0.07
MSH6-208ENST00000493177 SLC35G1Q2M3R5 365 aa15.47■□□□□ 0.07
MSH6-208ENST00000493177 ANO1Q5XXA6 986 aa15.47■□□□□ 0.07
MSH6-208ENST00000493177 UBE2Q1Q7Z7E8 422 aa15.47■□□□□ 0.07
MSH6-208ENST00000493177 CHST13Q8NET6 341 aa15.47■□□□□ 0.07
MSH6-208ENST00000493177 WASF1Q92558 559 aa15.47■□□□□ 0.07
MSH6-208ENST00000493177 ACAD9Q9H845 621 aa15.47■□□□□ 0.07
MSH6-208ENST00000493177 CNPY2Q9Y2B0 182 aa15.47■□□□□ 0.07
MSH6-208ENST00000493177 RIPK3Q9Y572 518 aa15.47■□□□□ 0.07
MSH6-208ENST00000493177 MCM3APO60318 1980 aa15.46■□□□□ 0.07
MSH6-208ENST00000493177 H0YGN5 161 aa15.46■□□□□ 0.07
MSH6-208ENST00000493177 PRAMEF19Q5SWL8 479 aa15.46■□□□□ 0.07
MSH6-208ENST00000493177 TINF2Q9BSI4 451 aa15.46■□□□□ 0.07
MSH6-208ENST00000493177 ALG1Q9BT22 464 aa15.46■□□□□ 0.07
MSH6-208ENST00000493177 RNF146Q9NTX7 359 aa15.46■□□□□ 0.07
MSH6-208ENST00000493177 CCPG1Q9ULG6 757 aa15.46■□□□□ 0.07
MSH6-208ENST00000493177 DIS3Q9Y2L1 958 aaKnown RBP15.46■□□□□ 0.07
MSH6-208ENST00000493177 PNMA6FA0A0J9YX94 578 aa15.45■□□□□ 0.06
MSH6-208ENST00000493177 KBTBD13C9JR72 458 aa15.45■□□□□ 0.06
MSH6-208ENST00000493177 ZBTB5O15062 677 aa15.45■□□□□ 0.06
MSH6-208ENST00000493177 SEPT4O43236 478 aa15.45■□□□□ 0.06
MSH6-208ENST00000493177 SCG2P13521 617 aa15.45■□□□□ 0.06
MSH6-208ENST00000493177 FDPSP14324 419 aaKnown RBP15.45■□□□□ 0.06
MSH6-208ENST00000493177 QRICH1Q2TAL8 776 aa15.45■□□□□ 0.06
MSH6-208ENST00000493177 ZNF792Q3KQV3 632 aa15.45■□□□□ 0.06
MSH6-208ENST00000493177 TKFCQ3LXA3 575 aa15.45■□□□□ 0.06
MSH6-208ENST00000493177 LHX8Q68G74 356 aa15.45■□□□□ 0.06
MSH6-208ENST00000493177 HEATR3Q7Z4Q2 680 aa15.45■□□□□ 0.06
MSH6-208ENST00000493177 C7orf61Q8IZ16 206 aa15.45■□□□□ 0.06
MSH6-208ENST00000493177 TRPV1Q8NER1 839 aa15.45■□□□□ 0.06
MSH6-208ENST00000493177 AGBL1Q96MI9 1066 aa15.45■□□□□ 0.06
MSH6-208ENST00000493177 TRERF1Q96PN7 1200 aa15.45■□□□□ 0.06
MSH6-208ENST00000493177 RANBP17Q9H2T7 1088 aaKnown RBP15.45■□□□□ 0.06
MSH6-208ENST00000493177 ZHX1Q9UKY1 873 aaPredicted RBP15.45■□□□□ 0.06
MSH6-208ENST00000493177 BAZ2BQ9UIF8 2168 aaKnown RBP15.45■□□□□ 0.06
MSH6-208ENST00000493177 TRIM29Q14134 588 aa15.44■□□□□ 0.06
MSH6-208ENST00000493177 PFKFB3Q16875 520 aaPredicted RBP15.44■□□□□ 0.06
MSH6-208ENST00000493177 FBXO11Q86XK2 927 aa15.44■□□□□ 0.06
MSH6-208ENST00000493177 ARRDC4Q8NCT1 418 aa15.44■□□□□ 0.06
MSH6-208ENST00000493177 GPKOWQ92917 476 aaPredicted RBP eCLIP15.44■□□□□ 0.06
MSH6-208ENST00000493177 AIFM3Q96NN9 605 aa15.44■□□□□ 0.06
MSH6-208ENST00000493177 SMCHD1A6NHR9 2005 aa15.44■□□□□ 0.06
MSH6-208ENST00000493177 H3BQV1 296 aa15.43■□□□□ 0.06
MSH6-208ENST00000493177 POTEB2H3BUK9 544 aa15.43■□□□□ 0.06
MSH6-208ENST00000493177 RARBP10826 455 aa15.43■□□□□ 0.06
MSH6-208ENST00000493177 XBP1P17861 261 aa15.43■□□□□ 0.06
MSH6-208ENST00000493177 PKN1Q16512 942 aa15.43■□□□□ 0.06
MSH6-208ENST00000493177 USH1GQ495M9 461 aa15.43■□□□□ 0.06
MSH6-208ENST00000493177 LARP1BQ659C4 914 aaKnown RBP15.43■□□□□ 0.06
MSH6-208ENST00000493177 NSMFQ6X4W1 530 aa15.43■□□□□ 0.06
MSH6-208ENST00000493177 MTMR8Q96EF0 704 aa15.43■□□□□ 0.06
MSH6-208ENST00000493177 C8orf76Q96K31 380 aa15.43■□□□□ 0.06
MSH6-208ENST00000493177 SENP6Q9GZR1 1112 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms