RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 ZNF862O60290 1169 aa3.96□□□□□ -1.77
SNX13-209ENST00000492626 PARNO95453 639 aaKnown RBP3.96□□□□□ -1.77
SNX13-209ENST00000492626 ASPAP45381 313 aa3.96□□□□□ -1.77
SNX13-209ENST00000492626 EXOSC10Q01780 885 aaKnown RBP3.96□□□□□ -1.77
SNX13-209ENST00000492626 TM4SF20Q53R12 229 aa3.96□□□□□ -1.77
SNX13-209ENST00000492626 ZBTB37Q5TC79 503 aa3.96□□□□□ -1.77
SNX13-209ENST00000492626 MRPL41Q8IXM3 137 aaKnown RBP3.96□□□□□ -1.77
SNX13-209ENST00000492626 DTWD1Q8N5C7 304 aa3.96□□□□□ -1.77
SNX13-209ENST00000492626 PHRF1Q9P1Y6 1649 aaKnown RBP3.96□□□□□ -1.77
SNX13-209ENST00000492626 USP6P35125 1406 aa3.96□□□□□ -1.77
SNX13-209ENST00000492626 ANKARQ7Z5J8 1434 aa3.96□□□□□ -1.77
SNX13-209ENST00000492626 WASHC2CQ9Y4E1 1318 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 EPXP11678 715 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 GUCY2FP51841 1108 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 PPP2R2AP63151 447 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 CWF19L1Q69YN2 538 aaKnown RBP3.96□□□□□ -1.78
SNX13-209ENST00000492626 DEFB132Q7Z7B7 95 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 CCDC146Q8IYE0 955 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 ADCY4Q8NFM4 1077 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 IRX2Q9BZI1 471 aaPredicted RBP3.96□□□□□ -1.78
SNX13-209ENST00000492626 FOXQ1Q9C009 403 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 STK32BQ9NY57 414 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 PCDHB12Q9Y5F1 795 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 LRRC37A3O60309 1634 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 ZNF831Q5JPB2 1677 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 UPK3BL1B0FP48 263 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 UPK3BL2E5RIL1 263 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 GABREP78334 506 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 STRN3Q13033 797 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 RGL3Q3MIN7 710 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 FAM209AQ5JX71 171 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 PPP4R4Q6NUP7 873 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 GALNT6Q8NCL4 622 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 BVESQ8NE79 360 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 OR2W6PQ8NHA6 318 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 NEDD1Q8NHV4 660 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 CCDC140Q96MF4 163 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 DPH2Q9BQC3 489 aaPredicted RBP3.96□□□□□ -1.78
SNX13-209ENST00000492626 TECPR2O15040 1411 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 LY75O60449 1722 aa3.96□□□□□ -1.78
SNX13-209ENST00000492626 POLD1P28340 1107 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 SCNN1BP51168 640 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 EPHB1P54762 984 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 CLEC16AQ2KHT3 1053 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 DDX53Q86TM3 631 aaKnown RBP3.95□□□□□ -1.78
SNX13-209ENST00000492626 LRRTM3Q86VH5 581 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 MTMR8Q96EF0 704 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 SMAD5Q99717 465 aaKnown RBP3.95□□□□□ -1.78
SNX13-209ENST00000492626 TJP2Q9UDY2 1190 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 TPX2Q9ULW0 747 aaKnown RBP3.95□□□□□ -1.78
SNX13-209ENST00000492626 FAN1Q9Y2M0 1017 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 KIAA1551Q9HCM1 1747 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 SPATA31A5Q5VU36 1347 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 SPATA31A7Q8IWB4 1347 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 KIF3BO15066 747 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 BRINP1O60477 761 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 CST3P01034 146 aaPredicted RBP3.95□□□□□ -1.78
SNX13-209ENST00000492626 BRD3Q15059 726 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 PRAMEF13Q5VWM6 474 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 SMYD4Q8IYR2 804 aaPredicted RBP3.95□□□□□ -1.78
SNX13-209ENST00000492626 BAHD1Q8TBE0 780 aaPredicted RBP3.95□□□□□ -1.78
SNX13-209ENST00000492626 MORC4Q8TE76 937 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 MYO5BQ9ULV0 1848 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 ECEL1O95672 775 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 PABPC1P11940 636 aaKnown RBP3.95□□□□□ -1.78
SNX13-209ENST00000492626 CCND1P24385 295 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 RBM10P98175 930 aaKnown RBP3.95□□□□□ -1.78
SNX13-209ENST00000492626 AMPD2Q01433 879 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 SRSF11Q05519 484 aaKnown RBP3.95□□□□□ -1.78
SNX13-209ENST00000492626 ITKQ08881 620 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 TRIM28Q13263 835 aaKnown RBP3.95□□□□□ -1.78
SNX13-209ENST00000492626 HDAC1Q13547 482 aaPredicted RBP3.95□□□□□ -1.78
SNX13-209ENST00000492626 CFAP100Q494V2 611 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 PRRT3Q5FWE3 981 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 C11orf74Q86VG3 221 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 ZNF227Q86WZ6 799 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 MFSD2AQ8NA29 543 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 WDR66Q8TBY9 1149 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 MIPEPQ99797 713 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 RNF112Q9ULX5 631 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 ZKSCAN5Q9Y2L8 839 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 SF3B6Q9Y3B4 125 aaKnown RBP3.95□□□□□ -1.78
SNX13-209ENST00000492626 SLIT3O75094 1523 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 KCNH1O95259 989 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 RASGRP1O95267 797 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 CPP00450 1065 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 KRT18P05783 430 aaKnown RBP3.95□□□□□ -1.78
SNX13-209ENST00000492626 ITGAVP06756 1048 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 ACRP10323 421 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 FGFR1P11362 822 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 TTLL4Q14679 1199 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 CHSY3Q70JA7 882 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 ZBTB46Q86UZ6 589 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 C7orf61Q8IZ16 206 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 ZNF512BQ96KM6 892 aaPredicted RBP3.95□□□□□ -1.78
SNX13-209ENST00000492626 FANCD2OSQ96PS1 177 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 TTC1Q99614 292 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 ENAMQ9NRM1 1142 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 KCNH3Q9ULD8 1083 aa3.95□□□□□ -1.78
SNX13-209ENST00000492626 MEGF6O75095 1541 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms