RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 WDR93Q6P2C0 686 aa18.02■□□□□ 0.48
SEMA4D-220ENST00000492386 KIAA0895Q8NCT3 520 aa18.02■□□□□ 0.48
SEMA4D-220ENST00000492386 TBCKQ8TEA7 893 aa18.02■□□□□ 0.48
SEMA4D-220ENST00000492386 NHEJ1Q9H9Q4 299 aaPredicted RBP18.02■□□□□ 0.48
SEMA4D-220ENST00000492386 GPR75-ASB3A0A0A6YYF3 556 aa18.02■□□□□ 0.47
SEMA4D-220ENST00000492386 SMARCA1P28370 1054 aa18.02■□□□□ 0.47
SEMA4D-220ENST00000492386 PPP1R2P41236 205 aa18.02■□□□□ 0.47
SEMA4D-220ENST00000492386 HNRNPH2P55795 449 aaKnown RBP18.02■□□□□ 0.47
SEMA4D-220ENST00000492386 TXLNBQ8N3L3 684 aa18.02■□□□□ 0.47
SEMA4D-220ENST00000492386 JAKMIP2Q96AA8 810 aa18.02■□□□□ 0.47
SEMA4D-220ENST00000492386 PIGSQ96S52 555 aa18.02■□□□□ 0.47
SEMA4D-220ENST00000492386 LACRTQ9GZZ8 138 aa18.02■□□□□ 0.47
SEMA4D-220ENST00000492386 CCNL1Q9UK58 526 aaPredicted RBP18.02■□□□□ 0.47
SEMA4D-220ENST00000492386 ADAM21Q9UKJ8 722 aa18.02■□□□□ 0.47
SEMA4D-220ENST00000492386 EIF3CLB5ME19 914 aaKnown RBP18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 CYLC1P35663 651 aaPredicted RBP18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 KIAA1328Q86T90 577 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 CERS3Q8IU89 383 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 CCDC170Q8IYT3 715 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 HPS3Q969F9 1004 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 CEP95Q96GE4 821 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 ERGIC2Q96RQ1 377 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 EIF3CQ99613 913 aaKnown RBP18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 GBP3Q9H0R5 595 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 SEMA6BQ9H3T3 888 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 SEC63Q9UGP8 760 aaKnown RBP18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 SAR1BQ9Y6B6 198 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 MTIF2P46199 727 aaKnown RBP18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 NOVP48745 357 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 AMPD3Q01432 767 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 CASP8Q14790 479 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 FIGNQ5HY92 759 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 TEX11Q8IYF3 940 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 EXOC4Q96A65 974 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 MMS19Q96T76 1030 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 NOC4LQ9BVI4 516 aaKnown RBP18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 VAT1LQ9HCJ6 419 aa18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 ZNHIT6Q9NWK9 470 aaKnown RBP18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 BIN2Q9UBW5 565 aaPredicted RBP18.01■□□□□ 0.47
SEMA4D-220ENST00000492386 A0A1W2PQJ5 194 aa18■□□□□ 0.47
SEMA4D-220ENST00000492386 ESYT2A0FGR8 921 aa18■□□□□ 0.47
SEMA4D-220ENST00000492386 KRT86O43790 486 aa18■□□□□ 0.47
SEMA4D-220ENST00000492386 SRGAP2O75044 1071 aa18■□□□□ 0.47
SEMA4D-220ENST00000492386 GPSM2P81274 684 aa18■□□□□ 0.47
SEMA4D-220ENST00000492386 CDK17Q00537 523 aa18■□□□□ 0.47
SEMA4D-220ENST00000492386 GPS2Q13227 327 aa18■□□□□ 0.47
SEMA4D-220ENST00000492386 GRB10Q13322 594 aa18■□□□□ 0.47
SEMA4D-220ENST00000492386 ORC2Q13416 577 aaPredicted RBP18■□□□□ 0.47
SEMA4D-220ENST00000492386 SOGA3Q5TF21 947 aa18■□□□□ 0.47
SEMA4D-220ENST00000492386 CNNM4Q6P4Q7 775 aa18■□□□□ 0.47
SEMA4D-220ENST00000492386 REXO1Q8N1G1 1221 aaKnown RBP18■□□□□ 0.47
SEMA4D-220ENST00000492386 EHBP1Q8NDI1 1231 aa18■□□□□ 0.47
SEMA4D-220ENST00000492386 MTMR9Q96QG7 549 aa18■□□□□ 0.47
SEMA4D-220ENST00000492386 TMEM260Q9NX78 707 aa18■□□□□ 0.47
SEMA4D-220ENST00000492386 NHSQ6T4R5 1651 aa18■□□□□ 0.47
SEMA4D-220ENST00000492386 USP14P54578 494 aa17.99■□□□□ 0.47
SEMA4D-220ENST00000492386 CENPPQ6IPU0 288 aa17.99■□□□□ 0.47
SEMA4D-220ENST00000492386 PURBQ96QR8 312 aaKnown RBP17.99■□□□□ 0.47
SEMA4D-220ENST00000492386 CD209Q9NNX6 404 aa17.99■□□□□ 0.47
SEMA4D-220ENST00000492386 BLOC1S4Q9NUP1 217 aa17.99■□□□□ 0.47
SEMA4D-220ENST00000492386 PSD3Q9NYI0 1048 aa17.99■□□□□ 0.47
SEMA4D-220ENST00000492386 FOCADQ5VW36 1801 aa17.99■□□□□ 0.47
SEMA4D-220ENST00000492386 USP17L5A8MUK1 530 aa17.99■□□□□ 0.47
SEMA4D-220ENST00000492386 N4BP1O75113 896 aaKnown RBP17.99■□□□□ 0.47
SEMA4D-220ENST00000492386 EIF3JO75822 258 aaKnown RBP17.99■□□□□ 0.47
SEMA4D-220ENST00000492386 RHBDL3P58872 404 aa17.99■□□□□ 0.47
SEMA4D-220ENST00000492386 CALML4Q96GE6 196 aa17.99■□□□□ 0.47
SEMA4D-220ENST00000492386 RIOX1Q9H6W3 641 aa17.99■□□□□ 0.47
SEMA4D-220ENST00000492386 TXKP42681 527 aa17.98■□□□□ 0.47
SEMA4D-220ENST00000492386 PCMTD1Q96MG8 357 aaPredicted RBP17.98■□□□□ 0.47
SEMA4D-220ENST00000492386 PNMA5Q96PV4 448 aa17.98■□□□□ 0.47
SEMA4D-220ENST00000492386 UBA5Q9GZZ9 404 aa17.98■□□□□ 0.47
SEMA4D-220ENST00000492386 SLC39A2Q9NP94 309 aa17.98■□□□□ 0.47
SEMA4D-220ENST00000492386 DUSP10Q9Y6W6 482 aa17.98■□□□□ 0.47
SEMA4D-220ENST00000492386 EDIL3O43854 480 aa17.98■□□□□ 0.47
SEMA4D-220ENST00000492386 IL1R1P14778 569 aa17.98■□□□□ 0.47
SEMA4D-220ENST00000492386 CYP27A1Q02318 531 aa17.98■□□□□ 0.47
SEMA4D-220ENST00000492386 SV2BQ7L1I2 683 aa17.98■□□□□ 0.47
SEMA4D-220ENST00000492386 CNBD1Q8NA66 436 aa17.98■□□□□ 0.47
SEMA4D-220ENST00000492386 LY75O60449 1722 aa17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 MYMKA6NI61 221 aa17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 ZNF263O14978 683 aa17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 FXR2P51116 673 aaKnown RBP eCLIP17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 VPS72Q15906 364 aa17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 FKBP15Q5T1M5 1219 aa17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 VPS18Q9P253 973 aa17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 LRRIQ3A6PVS8 624 aaPredicted RBP17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 UFL1O94874 794 aa17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 IPO7O95373 1038 aaKnown RBP17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 PLCG2P16885 1265 aa17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 HNRNPH3P31942 346 aaKnown RBP17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 RFC4P35249 363 aa17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 STK17AQ9UEE5 414 aa17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 SIK3Q9Y2K2 1263 aa17.97■□□□□ 0.47
SEMA4D-220ENST00000492386 ANO9A1A5B4 782 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 SLC37A4O43826 429 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 PDHBP11177 359 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 VAV2P52735 878 aa17.96■□□□□ 0.47
SEMA4D-220ENST00000492386 CALCRLQ16602 461 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms