RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 STAT6P42226 847 aa12.11□□□□□ -0.47
USP4-214ENST00000491791 MAP2K1Q02750 393 aaPredicted RBP12.11□□□□□ -0.47
USP4-214ENST00000491791 CFAP100Q494V2 611 aa12.11□□□□□ -0.47
USP4-214ENST00000491791 CERKLQ49MI3 558 aaPredicted RBP12.11□□□□□ -0.47
USP4-214ENST00000491791 MAP1SQ66K74 1059 aaPredicted RBP12.11□□□□□ -0.47
USP4-214ENST00000491791 MOXD1Q6UVY6 613 aa12.11□□□□□ -0.47
USP4-214ENST00000491791 RASGRP2Q7LDG7 609 aa12.11□□□□□ -0.47
USP4-214ENST00000491791 KIAA0825Q8IV33 1275 aa12.11□□□□□ -0.47
USP4-214ENST00000491791 LRRC47Q8N1G4 583 aaKnown RBP12.11□□□□□ -0.47
USP4-214ENST00000491791 TBCKQ8TEA7 893 aa12.11□□□□□ -0.47
USP4-214ENST00000491791 MBOAT7Q96N66 472 aa12.11□□□□□ -0.47
USP4-214ENST00000491791 CPVLQ9H3G5 476 aa12.11□□□□□ -0.47
USP4-214ENST00000491791 ADD3Q9UEY8 706 aaKnown RBP12.11□□□□□ -0.47
USP4-214ENST00000491791 LIMA1Q9UHB6 759 aaKnown RBP12.11□□□□□ -0.47
USP4-214ENST00000491791 HERC5Q9UII4 1024 aaKnown RBP12.11□□□□□ -0.47
USP4-214ENST00000491791 SYNRGQ9UMZ2 1314 aa12.11□□□□□ -0.47
USP4-214ENST00000491791 RASSF10A6NK89 507 aa12.1□□□□□ -0.47
USP4-214ENST00000491791 YDJCA8MPS7 323 aa12.1□□□□□ -0.47
USP4-214ENST00000491791 KLRC4O43908 158 aa12.1□□□□□ -0.47
USP4-214ENST00000491791 PPP1R11O60927 126 aaPredicted RBP12.1□□□□□ -0.47
USP4-214ENST00000491791 FECHP22830 423 aa12.1□□□□□ -0.47
USP4-214ENST00000491791 USP11P51784 963 aa12.1□□□□□ -0.47
USP4-214ENST00000491791 KARSQ15046 597 aaKnown RBP12.1□□□□□ -0.47
USP4-214ENST00000491791 SYCP1Q15431 976 aa12.1□□□□□ -0.47
USP4-214ENST00000491791 DNTTIP2Q5QJE6 756 aaKnown RBP12.1□□□□□ -0.47
USP4-214ENST00000491791 SPECC1LQ69YQ0 1117 aa12.1□□□□□ -0.47
USP4-214ENST00000491791 HOMER1Q86YM7 354 aa12.1□□□□□ -0.47
USP4-214ENST00000491791 NIM1KQ8IY84 436 aa12.1□□□□□ -0.47
USP4-214ENST00000491791 ADSSL1Q8N142 457 aa12.1□□□□□ -0.47
USP4-214ENST00000491791 GIMAP8Q8ND71 665 aaPredicted RBP12.1□□□□□ -0.47
USP4-214ENST00000491791 CUL5Q93034 780 aa12.1□□□□□ -0.47
USP4-214ENST00000491791 UBA5Q9GZZ9 404 aa12.1□□□□□ -0.47
USP4-214ENST00000491791 WBP1LQ9NX94 342 aa12.1□□□□□ -0.47
USP4-214ENST00000491791 STK17AQ9UEE5 414 aa12.1□□□□□ -0.47
USP4-214ENST00000491791 UQCRHLA0A096LP55 91 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 H7C1D1 291 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 TBC1D12O60347 775 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 STX10O60499 249 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 CCNT1O60563 726 aaKnown RBP12.09□□□□□ -0.47
USP4-214ENST00000491791 UQCRHP07919 91 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 EEF2P13639 858 aaKnown RBP12.09□□□□□ -0.47
USP4-214ENST00000491791 CDK11BP21127 795 aaKnown RBP12.09□□□□□ -0.47
USP4-214ENST00000491791 AMPD3Q01432 767 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 MAP3K10Q02779 954 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 PAK1Q13153 545 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 AOC3Q16853 763 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 LETM2Q2VYF4 491 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 HYIQ5T013 277 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 E4F1Q66K89 784 aaPredicted RBP12.09□□□□□ -0.47
USP4-214ENST00000491791 RSBN1LQ6PCB5 846 aaPredicted RBP12.09□□□□□ -0.47
USP4-214ENST00000491791 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
USP4-214ENST00000491791 USP50Q70EL3 339 aaPredicted RBP12.09□□□□□ -0.47
USP4-214ENST00000491791 CABP7Q86V35 215 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 TMEM139Q8IV31 216 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 NOC3LQ8WTT2 800 aaKnown RBP12.09□□□□□ -0.47
USP4-214ENST00000491791 CRYGNQ8WXF5 182 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 DHTKD1Q96HY7 919 aaPredicted RBP12.09□□□□□ -0.47
USP4-214ENST00000491791 MMTAG2Q9BU76 263 aaKnown RBP12.09□□□□□ -0.47
USP4-214ENST00000491791 BEGAINQ9BUH8 593 aa12.09□□□□□ -0.47
USP4-214ENST00000491791 SAMSN1Q9NSI8 373 aaKnown RBP12.09□□□□□ -0.47
USP4-214ENST00000491791 FRMPD2Q68DX3 1309 aaPredicted RBP12.09□□□□□ -0.47
USP4-214ENST00000491791 PVALEFA0A1B0GWK0 134 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 SPDYE2BA6NHP3 402 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 ARHGAP6O43182 974 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 CTIFO43310 598 aaKnown RBP12.08□□□□□ -0.48
USP4-214ENST00000491791 PPIP5K2O43314 1243 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 PLA2G6O60733 806 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 SPDYE6P0CI01 402 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 TNNT1P13805 278 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 ECE1P42892 770 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 TRAF1Q13077 416 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 AP3B2Q13367 1082 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 TPD52L1Q16890 204 aaPredicted RBP12.08□□□□□ -0.48
USP4-214ENST00000491791 FILIP1LQ4L180 1135 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 SLFN13Q68D06 897 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 TC2NQ8N9U0 490 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 FAM151AQ8WW52 585 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 CCDC51Q96ER9 411 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 ZBED3Q96IU2 234 aaPredicted RBP12.08□□□□□ -0.48
USP4-214ENST00000491791 PRMT6Q96LA8 375 aaPredicted RBP12.08□□□□□ -0.48
USP4-214ENST00000491791 PANX2Q96RD6 677 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 RAB34Q9BZG1 259 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 LRRC27Q9C0I9 530 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 VAT1LQ9HCJ6 419 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 GPCPD1Q9NPB8 672 aa12.08□□□□□ -0.48
USP4-214ENST00000491791 BIN2Q9UBW5 565 aaPredicted RBP12.08□□□□□ -0.48
USP4-214ENST00000491791 USP17L10C9JJH3 530 aa12.07□□□□□ -0.48
USP4-214ENST00000491791 TMEM232C9JQI7 657 aa12.07□□□□□ -0.48
USP4-214ENST00000491791 FOSP01100 380 aaPredicted RBP12.07□□□□□ -0.48
USP4-214ENST00000491791 LBX1P52954 281 aa12.07□□□□□ -0.48
USP4-214ENST00000491791 SEPT2Q15019 361 aa12.07□□□□□ -0.48
USP4-214ENST00000491791 PTPN14Q15678 1187 aa12.07□□□□□ -0.48
USP4-214ENST00000491791 ABCB5Q2M3G0 1257 aa12.07□□□□□ -0.48
USP4-214ENST00000491791 JAKMIP3Q5VZ66 844 aa12.07□□□□□ -0.48
USP4-214ENST00000491791 TTBK2Q6IQ55 1244 aa12.07□□□□□ -0.48
USP4-214ENST00000491791 MTERF4Q7Z6M4 381 aaKnown RBP12.07□□□□□ -0.48
USP4-214ENST00000491791 FAM83AQ86UY5 434 aa12.07□□□□□ -0.48
USP4-214ENST00000491791 TRMT44Q8IYL2 757 aaKnown RBP12.07□□□□□ -0.48
USP4-214ENST00000491791 KCTD17Q8N5Z5 321 aa12.07□□□□□ -0.48
USP4-214ENST00000491791 AGBL3Q8NEM8 1001 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms