RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 ZMYND12Q9H0C1 365 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 NYAP2Q9P242 653 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 MAD2L2Q9UI95 211 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 HERC5Q9UII4 1024 aaKnown RBP8.16□□□□□ -1.1
NPHP3-208ENST00000490993 COL4A3BPQ9Y5P4 624 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 ADAMTS7Q9UKP4 1686 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 PRR29P0C7W0 189 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 NF2P35240 595 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 SLC16A2P36021 539 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 TCP11X2Q5H9J9 407 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 ILDR1Q86SU0 546 aaPredicted RBP8.16□□□□□ -1.1
NPHP3-208ENST00000490993 TUBGCP2Q9BSJ2 902 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 ANO3Q9BYT9 981 aa8.16□□□□□ -1.1
NPHP3-208ENST00000490993 FAM217BQ9NTX9 383 aaPredicted RBP8.16□□□□□ -1.1
NPHP3-208ENST00000490993 FGRP09769 529 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 AKR1B1P15121 316 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 GAP43P17677 238 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 LRRC63Q05C16 580 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 CUL4BQ13620 913 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 PDIA5Q14554 519 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 CNOT6LQ96LI5 555 aaKnown RBP8.15□□□□□ -1.1
NPHP3-208ENST00000490993 SELENOOQ9BVL4 669 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 TEKT3Q9BXF9 490 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 HAUS4Q9H6D7 363 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 METTL14Q9HCE5 456 aaKnown RBP8.15□□□□□ -1.1
NPHP3-208ENST00000490993 PALM3A6NDB9 673 aaPredicted RBP8.15□□□□□ -1.1
NPHP3-208ENST00000490993 ACTN4O43707 911 aaKnown RBP8.15□□□□□ -1.1
NPHP3-208ENST00000490993 USP11P51784 963 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 SMTNP53814 917 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 USP14P54578 494 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 ZNF543Q08ER8 600 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 DPYDQ12882 1025 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 ENOX2Q16206 610 aaKnown RBP8.15□□□□□ -1.1
NPHP3-208ENST00000490993 LEKR1Q6ZMV7 388 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 UNC13DQ70J99 1090 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 ADGRF4Q8IZF3 695 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 MRPL44Q9H9J2 332 aaKnown RBP8.15□□□□□ -1.1
NPHP3-208ENST00000490993 SLC39A2Q9NP94 309 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 OGFRQ9NZT2 677 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 POLLQ9UGP5 575 aa8.15□□□□□ -1.1
NPHP3-208ENST00000490993 NHSL1Q5SYE7 1610 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 GDF11O95390 407 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 NOP2P46087 812 aaKnown RBP8.15□□□□□ -1.11
NPHP3-208ENST00000490993 RBL2Q08999 1139 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 CDC42EP5Q6NZY7 148 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 IWS1Q96ST2 819 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 WDR11Q9BZH6 1224 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 TSKSQ9UJT2 592 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 SERPINA10Q9UK55 444 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 KIAA1024Q9UPX6 916 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 GJA3Q9Y6H8 435 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 POLRMTO00411 1230 aaKnown RBP8.15□□□□□ -1.11
NPHP3-208ENST00000490993 CHMP2AO43633 222 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 CASP14P31944 242 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 CBX1P83916 185 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 ZYXQ15942 572 aaKnown RBP8.15□□□□□ -1.11
NPHP3-208ENST00000490993 ASIC2Q16515 512 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 TXNRD3Q86VQ6 643 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 SMYD4Q8IYR2 804 aaPredicted RBP8.15□□□□□ -1.11
NPHP3-208ENST00000490993 MYCT1Q8N699 235 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 SECISBP2LQ93073 1101 aaKnown RBP8.15□□□□□ -1.11
NPHP3-208ENST00000490993 CCDC102AQ96A19 550 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 RPGRIP1Q96KN7 1286 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 FAM184BQ9ULE4 1060 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 PCDHB13Q9Y5F0 798 aa8.15□□□□□ -1.11
NPHP3-208ENST00000490993 FAM237AA0A1B0GTK4 181 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 EEF2P13639 858 aaKnown RBP8.14□□□□□ -1.11
NPHP3-208ENST00000490993 CETN2P41208 172 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 TTLL12Q14166 644 aaPredicted RBP8.14□□□□□ -1.11
NPHP3-208ENST00000490993 CCDC144BQ3MJ40 725 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 SFMBT2Q5VUG0 894 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 PPP4R3CPQ6ZMV5 832 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 NLRX1Q86UT6 975 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 NID2Q14112 1375 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 TOB1P50616 345 aaPredicted RBP8.14□□□□□ -1.11
NPHP3-208ENST00000490993 PKN1Q16512 942 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 MAN2A1Q16706 1144 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 WHAMMP3Q1A5X7 153 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 BICD1Q96G01 975 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 EHD4Q9H223 541 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 MORC2Q9Y6X9 1032 aaPredicted RBP8.14□□□□□ -1.11
NPHP3-208ENST00000490993 GCNT3O95395 438 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 PDHBP11177 359 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 CHMP4BP1P59074 171 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 KRT31Q15323 416 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 UBE2SQ16763 222 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 DCAF17Q5H9S7 520 aaPredicted RBP8.14□□□□□ -1.11
NPHP3-208ENST00000490993 MIER3Q7Z3K6 550 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 SLC17A8Q8NDX2 589 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 FAM20AQ96MK3 541 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 SIPA1L3O60292 1781 aaPredicted RBP8.14□□□□□ -1.11
NPHP3-208ENST00000490993 EFCAB8A8MWE9 144 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 SRGNP10124 158 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 CDC25AP30304 524 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 FKBP1AP62942 108 aaKnown RBP8.14□□□□□ -1.11
NPHP3-208ENST00000490993 FKBP3Q00688 224 aaKnown RBP8.14□□□□□ -1.11
NPHP3-208ENST00000490993 AOC3Q16853 763 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 TPH2Q8IWU9 490 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 RAD54LQ92698 747 aa8.14□□□□□ -1.11
NPHP3-208ENST00000490993 SLF1Q9BQI6 1058 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms