RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-210	ENST00000490668	ZGPAT	Q8N5A5	531 aa	Known RBP	5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	GOLM1	Q8NBJ4	401 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	AGBL3	Q8NEM8	1001 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	SVIP	Q8NHG7	77 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	TDRD7	Q8NHU6	1098 aa	Known RBP	5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	DPF2	Q92785	391 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	GCC1	Q96CN9	775 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	KLRG1	Q96E93	195 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	FAM84B	Q96KN1	310 aa	Predicted RBP	5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	DBNDD2	Q9BQY9	259 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	RWDD1	Q9H446	243 aa	Predicted RBP	5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	DCTPP1	Q9H773	170 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	IL1RAPL2	Q9NP60	686 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	GPRC5D	Q9NZD1	345 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	HDAC9	Q9UKV0	1011 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	DENND2A	Q9ULE3	1009 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	USP20	Q9Y2K6	914 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	MYH13	Q9UKX3	1938 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	FAM205A	Q6ZU69	1335 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	SALL1	Q9NSC2	1324 aa		5.22	□□□□□ -1.57
SFPQ-210	ENST00000490668	ZNF646	O15015	1829 aa	Predicted RBP	5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	SOWAHB	A6NEL2	793 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	WTIP	A6NIX2	430 aa	Predicted RBP	5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	GSG1L2	A8MUP6	293 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668		B2RBV5	119 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668		H7C1D1	291 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	EREG	O14944	169 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	FBXO24	O75426	580 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	KATNA1	O75449	491 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	KIF4A	O95239	1232 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	RASGRP1	O95267	797 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	ADORA1	P30542	326 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	VEGFB	P49765	207 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	MMP14	P50281	582 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	BCAM	P50895	628 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	COPS2	P61201	443 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	SSRP1	Q08945	709 aa	Known RBP	5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	BRD3	Q15059	726 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	FXN	Q16595	210 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	KIF4B	Q2VIQ3	1234 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	SEZ6	Q53EL9	994 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	SNAP47	Q5SQN1	464 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	DACT2	Q5SW24	774 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	C10orf62	Q5T681	223 aa	Predicted RBP	5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	LARP1B	Q659C4	914 aa	Known RBP	5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	PDE12	Q6L8Q7	609 aa	Known RBP	5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	PPP4R4	Q6NUP7	873 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	SV2B	Q7L1I2	683 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	AFAP1L2	Q8N4X5	818 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	GPATCH11	Q8N954	259 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	FBXO27	Q8NI29	283 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	WDR66	Q8TBY9	1149 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	MTA3	Q9BTC8	594 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	LRRC3	Q9BY71	257 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	TAF1D	Q9H5J8	278 aa	Predicted RBP	5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	ELP3	Q9H9T3	547 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	RRAGC	Q9HB90	399 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	ADARB2	Q9NS39	739 aa	Known RBP	5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	TLR7	Q9NYK1	1049 aa	Known RBP	5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	ZIM2	Q9NZV7	527 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	MCM8	Q9UJA3	840 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	TSR3	Q9UJK0	312 aa	Known RBP	5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	DBNL	Q9UJU6	430 aa	Known RBP	5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	FBXO9	Q9UK97	447 aa	Predicted RBP	5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	PPM1H	Q9ULR3	514 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	JAG2	Q9Y219	1238 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	SCN9A	Q15858	1988 aa		5.21	□□□□□ -1.58
SFPQ-210	ENST00000490668	ADAMTSL1	Q8N6G6	1762 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	TGFBR3L	H3BV60	316 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	MYO1B	O43795	1136 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	TOMM70	O94826	608 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	FAM153B	P0C7A2	387 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	TFE3	P19532	575 aa	Predicted RBP	5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	SOX5	P35711	763 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	TXLNA	P40222	546 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	EPS15	P42566	896 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	GUCY2F	P51841	1108 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	TIMM10	P62072	90 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	CBX2	Q14781	532 aa	Predicted RBP	5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	KIAA0319	Q5VV43	1072 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	MRM1	Q6IN84	353 aa	Known RBP	5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	USP50	Q70EL3	339 aa	Predicted RBP	5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	LDHD	Q86WU2	507 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	DZIP1	Q86YF9	867 aa	Known RBP	5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	CHPF	Q8IZ52	775 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	SPATA5	Q8NB90	893 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	SMC1B	Q8NDV3	1235 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	ZSWIM2	Q8NEG5	633 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	EAF2	Q96CJ1	260 aa	Predicted RBP	5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	ESYT1	Q9BSJ8	1104 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	CASS4	Q9NQ75	786 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	ABCF2	Q9UG63	623 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	CNOT7	Q9UIV1	285 aa	Known RBP	5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	KCNMB2	Q9Y691	235 aa		5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	5.2	□□□□□ -1.58
SFPQ-210	ENST00000490668		A0A1W2PP55	124 aa		5.19	□□□□□ -1.58
SFPQ-210	ENST00000490668		F8W031	263 aa	Predicted RBP	5.19	□□□□□ -1.58
SFPQ-210	ENST00000490668	ERC2	O15083	957 aa		5.19	□□□□□ -1.58
SFPQ-210	ENST00000490668	TLR3	O15455	904 aa	Known RBP	5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms