RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 FAM46AQ96IP4 442 aaKnown RBP6.78□□□□□ -1.32
SSX2IP-208ENST00000490476 IPO9Q96P70 1041 aaKnown RBP6.78□□□□□ -1.32
SSX2IP-208ENST00000490476 PDGFDQ9GZP0 370 aaPredicted RBP6.78□□□□□ -1.32
SSX2IP-208ENST00000490476 TPX2Q9ULW0 747 aaKnown RBP6.78□□□□□ -1.32
SSX2IP-208ENST00000490476 NRAPQ86VF7 1730 aa6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 ABCA3Q99758 1704 aa6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 FAM95CA0A1B0GW59 222 aa6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 NOP56O00567 594 aaKnown RBP6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 MSTNO14793 375 aa6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 LRRN2O75325 713 aa6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 IGBP1P78318 339 aa6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 HSP90AA2PQ14568 343 aaPredicted RBP6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 PPP2R5DQ14738 602 aa6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 CBX2Q14781 532 aaPredicted RBP6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 VPS72Q15906 364 aa6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 NOL9Q5SY16 702 aaKnown RBP6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 YOD1Q5VVQ6 348 aaPredicted RBP6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 Q6ZS46 218 aa6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 ZNF227Q86WZ6 799 aa6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 ZCRB1Q8TBF4 217 aaKnown RBP6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 BRF1Q92994 677 aa6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 MEGF10Q96KG7 1140 aa6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 ARHGEF4Q9NR80 690 aa6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 COL4A3BPQ9Y5P4 624 aa6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 RPRD2Q5VT52 1461 aaKnown RBP6.77□□□□□ -1.33
SSX2IP-208ENST00000490476 TULP4Q9NRJ4 1543 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 TRAV20A0A0B4J274 112 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 TBX1O43435 398 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 ITGA4P13612 1032 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 CD247P20963 164 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 ANAPC15P60006 121 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 PPP2R2AP63151 447 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 MBTPS1Q14703 1052 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 DHX37Q8IY37 1157 aaKnown RBP6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 EXOC2Q96KP1 924 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 MYRFLQ96LU7 910 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 AARSD1Q9BTE6 412 aaKnown RBP6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 GP6Q9HCN6 339 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 WHRNQ9P202 907 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 AKT3Q9Y243 479 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 PRKAB1Q9Y478 270 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 PCDHB12Q9Y5F1 795 aa6.76□□□□□ -1.33
SSX2IP-208ENST00000490476 A0A0C4DFX4 3053 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 TRBV23-1A0A0A0MS06 115 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 PRODHO43272 600 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 LEFTY1O75610 366 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 ITGB2P05107 769 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 GRIA2P42262 883 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 ADGRE1Q14246 886 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 LONRF2Q1L5Z9 754 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 PAOXQ6QHF9 649 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 FAM20CQ8IXL6 584 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 ARMC10Q8N2F6 343 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 BVESQ8NE79 360 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 RNF141Q8WVD5 230 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 EZH1Q92800 747 aaPredicted RBP6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 SPOCK3Q9BQ16 436 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 DHRS4Q9BTZ2 278 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 NOL6Q9H6R4 1146 aaKnown RBP6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 TRPM2O94759 1503 aa6.75□□□□□ -1.33
SSX2IP-208ENST00000490476 DHX57Q6P158 1386 aaKnown RBP6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 MEIS1O00470 390 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 IRS4O14654 1257 aaPredicted RBP6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 SHOXO15266 292 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 KCNH1O95259 989 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 CBX7O95931 251 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 MASP1P48740 699 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 ZNF445P59923 1031 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 SNW1Q13573 536 aaKnown RBP6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 UVSSAQ2YD98 709 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 ANKRD39Q53RE8 183 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 DALRD3Q5D0E6 543 aaKnown RBP6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 BEND4Q6ZU67 534 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 SYNPOQ8N3V7 929 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 VWCEQ96DN2 955 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 PSMG3-AS1Q96PY0 264 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 DUSP23Q9BVJ7 150 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 ASPNQ9BXN1 380 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 PRDM14Q9GZV8 571 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 PCDH12Q9NPG4 1184 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 C1GALT1Q9NS00 363 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 GFOD1Q9NXC2 390 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 MRPS23Q9Y3D9 190 aaKnown RBP6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 CLIP1P30622 1438 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 TROQ12816 1431 aaPredicted RBP6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 CNTNAP4Q9C0A0 1308 aa6.74□□□□□ -1.33
SSX2IP-208ENST00000490476 FAM87AP0C7U9 286 aa6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 PABPC1P11940 636 aaKnown RBP6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 CYP7A1P22680 504 aa6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 NBPF9Q3BBW0 867 aa6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 ZC3H12BQ5HYM0 836 aaKnown RBP6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 NSMFQ6X4W1 530 aa6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 TXNRD3Q86VQ6 643 aa6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 FIBCD1Q8N539 461 aa6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 ZNF513Q8N8E2 541 aaPredicted RBP6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 BTN2A2Q8WVV5 523 aa6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 FBXL18Q96ME1 805 aa6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 ZDHHC15Q96MV8 337 aa6.73□□□□□ -1.33
SSX2IP-208ENST00000490476 IER2Q9BTL4 223 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms